Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6728.t1
Gene name
Locationscaffold_18:344086..345549
Strand+
Gene length (bp)1463
Transcript length (bp)1200
Coding sequence length (bp)1200
Protein length (aa) 400

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10342 Kre9_KNH Kre9/KNH-like N-terminal Ig-like domain 2.7E-18 22 112

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6728.t1
MRMNIICLAVLAATAAGLTVTSPRIGEKIDPDLPLTIKWQSVSTDPQTFTIELVNQNVYPPTTTIVADDVDSSKG
SYTVKAKTFADVDDGKGYQINFLSPTSGILAQSQQFLVTEPGEIASSASSSGKETSTALETSSASSLISSTAWTS
DLTSSTPSSSTTSSYLSSTATHTSISASSPTSSYYSTASSSISTPTTSSFITSSSASASTSSVYSSITSTYTSTP
EGPSYFPSTPSTLTVTTSYTETLTTTLMLTTLTSSSVTSISTIATSSSITPTPSSIISTFTTPTTSISITTSSIP
PTTSTHLPTSTFITSSTISSTTYLSTHTSTTPEWTSSSTITSSSLSTATHSSTTSTTTHKTTSTTTSTATESAST
TSNAAAVLMPPSGSLLLGLFALVL*
Coding >Pro_DTO377G3_2|g6728.t1
ATGCGGATGAATATTATCTGCCTGGCGGTTCTGGCTGCTACAGCTGCAGGTCTCACTGTCACTTCCCCCCGGATT
GGTGAGAAGATTGACCCCGACCTGCCTCTTACTATCAAGTGGCAGTCCGTCTCAACGGATCCGCAAACCTTTACC
ATCGAACTGGTCAATCAGAATGTCTACCCTCCGACAACGACAATTGTGGCAGATGATGTAGACTCTTCCAAGGGC
TCCTACACTGTCAAAGCAAAAACGTTCGCGGATGTAGATGATGGGAAGGGATATCAGATCAACTTCCTCTCTCCG
ACTAGCGGCATTCTGGCTCAGTCTCAGCAATTCCTAGTCACTGAGCCTGGTGAAATCGCTAGTAGTGCTAGTAGC
TCTGGTAAGGAAACCAGTACTGCGCTTGAAACTTCGTCTGCCTCGTCCTTGATTTCTTCCACCGCGTGGACCAGT
GATCTTACTTCTTCGACTCCTTCTTCCTCGACTACTTCCTCTTACCTGTCTTCGACTGCTACTCACACCTCCATC
AGTGCGTCTAGCCCTACCTCGTCCTATTACTCTACTGCTTCATCTTCTATTTCTACCCCTACAACATCTTCTTTT
ATAACTAGCTCTTCTGCAAGTGCGTCTACCTCTTCCGTTTATTCTTCTATTACTTCAACCTATACTTCCACCCCT
GAAGGACCATCTTATTTCCCCTCAACACCCTCTACTTTGACAGTTACAACTTCTTACACCGAGACCTTGACTACT
ACCTTGATGCTTACCACCCTCACTTCTTCCTCAGTTACTTCTATTTCTACAATTGCAACTTCTTCTTCTATTACA
CCAACTCCATCCTCCATTATATCTACCTTTACTACCCCGACTACTTCTATTTCCATTACCACGTCGTCTATCCCA
CCTACTACATCCACACATCTTCCTACCTCGACTTTCATCACATCAAGCACTATCTCATCTACCACATATCTTTCT
ACCCACACATCCACTACCCCTGAATGGACCTCATCTTCAACCATCACCTCGAGTAGTCTGTCCACCGCAACCCAT
TCGAGCACTACTTCGACCACCACTCACAAGACTACTTCGACCACAACATCGACTGCTACGGAGTCGGCAAGTACC
ACCTCGAACGCTGCTGCCGTCCTCATGCCCCCTTCTGGCAGTCTGCTTCTGGGTCTGTTTGCGCTGGTCCTTTAA
Transcript >Pro_DTO377G3_2|g6728.t1
ATGCGGATGAATATTATCTGCCTGGCGGTTCTGGCTGCTACAGCTGCAGGTCTCACTGTCACTTCCCCCCGGATT
GGTGAGAAGATTGACCCCGACCTGCCTCTTACTATCAAGTGGCAGTCCGTCTCAACGGATCCGCAAACCTTTACC
ATCGAACTGGTCAATCAGAATGTCTACCCTCCGACAACGACAATTGTGGCAGATGATGTAGACTCTTCCAAGGGC
TCCTACACTGTCAAAGCAAAAACGTTCGCGGATGTAGATGATGGGAAGGGATATCAGATCAACTTCCTCTCTCCG
ACTAGCGGCATTCTGGCTCAGTCTCAGCAATTCCTAGTCACTGAGCCTGGTGAAATCGCTAGTAGTGCTAGTAGC
TCTGGTAAGGAAACCAGTACTGCGCTTGAAACTTCGTCTGCCTCGTCCTTGATTTCTTCCACCGCGTGGACCAGT
GATCTTACTTCTTCGACTCCTTCTTCCTCGACTACTTCCTCTTACCTGTCTTCGACTGCTACTCACACCTCCATC
AGTGCGTCTAGCCCTACCTCGTCCTATTACTCTACTGCTTCATCTTCTATTTCTACCCCTACAACATCTTCTTTT
ATAACTAGCTCTTCTGCAAGTGCGTCTACCTCTTCCGTTTATTCTTCTATTACTTCAACCTATACTTCCACCCCT
GAAGGACCATCTTATTTCCCCTCAACACCCTCTACTTTGACAGTTACAACTTCTTACACCGAGACCTTGACTACT
ACCTTGATGCTTACCACCCTCACTTCTTCCTCAGTTACTTCTATTTCTACAATTGCAACTTCTTCTTCTATTACA
CCAACTCCATCCTCCATTATATCTACCTTTACTACCCCGACTACTTCTATTTCCATTACCACGTCGTCTATCCCA
CCTACTACATCCACACATCTTCCTACCTCGACTTTCATCACATCAAGCACTATCTCATCTACCACATATCTTTCT
ACCCACACATCCACTACCCCTGAATGGACCTCATCTTCAACCATCACCTCGAGTAGTCTGTCCACCGCAACCCAT
TCGAGCACTACTTCGACCACCACTCACAAGACTACTTCGACCACAACATCGACTGCTACGGAGTCGGCAAGTACC
ACCTCGAACGCTGCTGCCGTCCTCATGCCCCCTTCTGGCAGTCTGCTTCTGGGTCTGTTTGCGCTGGTCCTTTAA
Gene >Pro_DTO377G3_2|g6728.t1
ATGCGGATGAATATTATCTGCCTGGCGGTTCTGGCTGCTACAGCTGCAGGTATGAAATATCGTCCGCGGGAATAC
AATCAATATAGTAACCGTTGAATCAGGTCTCACTGTCACTTCCCCCCGGATTGGTGAGAAGATTGACCCCGACCT
GCCTCTTACTATCAAGTGGCAGTCCGTCTCGTAAGCTGCTAGTTATCCCAGTGCTTTATGAACACTGGCAATTTG
CTAACCAGAAATACAATATTAATAGAACGGATCCGCAAACCTTTACCATCGAACTGGTCAATCAGAATGTCTACC
CTCCGACAACGACAATTGTGGCAGATGATGTAGACTCTTCCAAGGGCTCCTACACTGTCAAAGCAAAAACGTTCG
CGGATGTAGATGATGGGTAAGTTCAATTTCATTGCATTCTATTTGAATTACTGACTGATGAGCAATTTAGGAAGG
GATATCAGATCAACTTCCTCTCTCCGACTAGCGGCATTCTGGCTCAGTCTCAGCAATTCCTAGTCACTGAGCCTG
GTGAAATCGCTAGTAGTGCTAGTAGCTCTGGTAAGGAAACCAGTACTGCGCTTGAAACTTCGTCTGCCTCGTCCT
TGATTTCTTCCACCGCGTGGACCAGTGATCTTACTTCTTCGACTCCTTCTTCCTCGACTACTTCCTCTTACCTGT
CTTCGACTGCTACTCACACCTCCATCAGTGCGTCTAGCCCTACCTCGTCCTATTACTCTACTGCTTCATCTTCTA
TTTCTACCCCTACAACATCTTCTTTTATAACTAGCTCTTCTGCAAGTGCGTCTACCTCTTCCGTTTATTCTTCTA
TTACTTCAACCTATACTTCCACCCCTGAAGGACCATCTTATTTCCCCTCAACACCCTCTACTTTGACAGTTACAA
CTTCTTACACCGAGACCTTGACTACTACCTTGATGCTTACCACCCTCACTTCTTCCTCAGTTACTTCTATTTCTA
CAATTGCAACTTCTTCTTCTATTACACCAACTCCATCCTCCATTATATCTACCTTTACTACCCCGACTACTTCTA
TTTCCATTACCACGTCGTCTATCCCACCTACTACATCCACACATCTTCCTACCTCGACTTTCATCACATCAAGCA
CTATCTCATCTACCACATATCTTTCTACCCACACATCCACTACCCCTGGTTAGTAAAGGCGGAAAGCGTAGCTTC
CGAGACAGCATTTTGTTTTTACCCACTTCATGAAAGAAACAGGGACTGACTTATCCATAGAATGGACCTCATCTT
CAACCATCACCTCGAGTAGTCTGTCCACCGCAACCCATTCGAGCACTACTTCGACCACCACTCACAAGACTACTT
CGACCACAACATCGACTGCTACGGAGTCGGCAAGTACCACCTCGAACGCTGCTGCCGTCCTCATGCCCCCTTCTG
GCAGTCTGCTTCTGGGTCTGTTTGCGCTGGTCCTTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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