Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6725.t1
Gene name
Locationscaffold_18:337091..338210
Strand+
Gene length (bp)1119
Transcript length (bp)1119
Coding sequence length (bp)1119
Protein length (aa) 373

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13637 Ank_4 Ankyrin repeats (many copies) 4.6E-08 106 157
PF12796 Ank_2 Ankyrin repeats (3 copies) 1.9E-09 110 190

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6725.t1
MSLDILPTELILMIEKNLHSQKDRNALIRTSPRFALMFDEKLYKSCSAQEHSYIILWAAKRGLEGTIHKCLKAGA
KIPRRDRFRSHLIDRDAPESLSVIPRHPKSHPLTAAAEFGSLSCVNLFLEKGVNPNLLDEHYETPLRQAAGNGHV
NVVELLLSSDALAFTGAFKLRRPLKIAAARGHLPVLKALFSFLGSGDRNLTVKDAAQIILYEGLWHSKVSVVRYA
LKQGADVNDENSEFVLRFAPDLRPDDPPEKTRSRLVQGHKIGVTVRGIPTAGWSNLIPNTLHAALVGGDRRLIDL
IIDTGYDITQIGSILRYAVLRRENVLISKLMNMGVNITSKILYESVCGEDLVMKEFMKTTLEKTMEELGLNN*
Coding >Pro_DTO377G3_2|g6725.t1
ATGTCGCTTGATATTCTACCCACAGAGCTCATTCTCATGATTGAGAAGAATCTGCATTCCCAGAAAGACCGCAAT
GCCTTGATTCGCACGAGCCCGCGTTTCGCCCTCATGTTCGACGAGAAACTATACAAGAGCTGCTCAGCACAGGAA
CACAGCTATATTATCCTATGGGCAGCTAAGCGAGGCCTGGAGGGCACCATACACAAGTGCCTGAAGGCTGGCGCT
AAAATTCCACGGCGAGATAGATTCAGGTCTCATTTGATCGATCGCGACGCACCCGAGTCTTTGAGTGTCATCCCA
CGGCACCCCAAATCACACCCATTGACCGCAGCAGCCGAATTTGGCTCACTGTCTTGCGTCAATCTTTTCCTTGAG
AAAGGCGTCAATCCCAACTTGTTGGATGAACATTACGAAACTCCACTGAGACAGGCTGCAGGAAATGGCCATGTC
AATGTCGTTGAGTTGTTACTTTCCAGCGATGCTCTCGCATTCACGGGTGCCTTCAAGTTGCGACGACCTCTGAAG
ATTGCTGCGGCTCGCGGTCATTTACCCGTGCTCAAGGCGCTGTTCTCTTTCCTTGGGAGTGGCGATCGAAATCTC
ACCGTCAAAGATGCTGCCCAGATCATCCTGTACGAGGGACTCTGGCACAGCAAAGTAAGTGTTGTCAGGTATGCA
CTCAAACAGGGTGCGGATGTGAATGACGAAAATTCCGAGTTCGTGTTGCGGTTCGCTCCAGATCTACGCCCAGAC
GATCCCCCCGAGAAAACACGATCAAGATTGGTCCAAGGTCACAAGATCGGAGTGACAGTTCGAGGGATCCCCACC
GCAGGCTGGTCGAACCTCATCCCCAATACCCTCCACGCTGCGCTCGTTGGTGGTGATAGGAGGCTGATTGATTTG
ATCATTGACACTGGTTATGATATTACTCAAATTGGGTCCATCCTGCGGTATGCAGTCCTTCGGAGAGAGAACGTA
CTCATCAGTAAGTTGATGAATATGGGGGTCAACATCACCTCCAAAATTCTTTATGAGTCCGTTTGTGGTGAAGAT
TTGGTTATGAAGGAGTTCATGAAGACGACCTTGGAGAAGACTATGGAAGAACTGGGACTCAATAATTGA
Transcript >Pro_DTO377G3_2|g6725.t1
ATGTCGCTTGATATTCTACCCACAGAGCTCATTCTCATGATTGAGAAGAATCTGCATTCCCAGAAAGACCGCAAT
GCCTTGATTCGCACGAGCCCGCGTTTCGCCCTCATGTTCGACGAGAAACTATACAAGAGCTGCTCAGCACAGGAA
CACAGCTATATTATCCTATGGGCAGCTAAGCGAGGCCTGGAGGGCACCATACACAAGTGCCTGAAGGCTGGCGCT
AAAATTCCACGGCGAGATAGATTCAGGTCTCATTTGATCGATCGCGACGCACCCGAGTCTTTGAGTGTCATCCCA
CGGCACCCCAAATCACACCCATTGACCGCAGCAGCCGAATTTGGCTCACTGTCTTGCGTCAATCTTTTCCTTGAG
AAAGGCGTCAATCCCAACTTGTTGGATGAACATTACGAAACTCCACTGAGACAGGCTGCAGGAAATGGCCATGTC
AATGTCGTTGAGTTGTTACTTTCCAGCGATGCTCTCGCATTCACGGGTGCCTTCAAGTTGCGACGACCTCTGAAG
ATTGCTGCGGCTCGCGGTCATTTACCCGTGCTCAAGGCGCTGTTCTCTTTCCTTGGGAGTGGCGATCGAAATCTC
ACCGTCAAAGATGCTGCCCAGATCATCCTGTACGAGGGACTCTGGCACAGCAAAGTAAGTGTTGTCAGGTATGCA
CTCAAACAGGGTGCGGATGTGAATGACGAAAATTCCGAGTTCGTGTTGCGGTTCGCTCCAGATCTACGCCCAGAC
GATCCCCCCGAGAAAACACGATCAAGATTGGTCCAAGGTCACAAGATCGGAGTGACAGTTCGAGGGATCCCCACC
GCAGGCTGGTCGAACCTCATCCCCAATACCCTCCACGCTGCGCTCGTTGGTGGTGATAGGAGGCTGATTGATTTG
ATCATTGACACTGGTTATGATATTACTCAAATTGGGTCCATCCTGCGGTATGCAGTCCTTCGGAGAGAGAACGTA
CTCATCAGTAAGTTGATGAATATGGGGGTCAACATCACCTCCAAAATTCTTTATGAGTCCGTTTGTGGTGAAGAT
TTGGTTATGAAGGAGTTCATGAAGACGACCTTGGAGAAGACTATGGAAGAACTGGGACTCAATAATTGA
Gene >Pro_DTO377G3_2|g6725.t1
ATGTCGCTTGATATTCTACCCACAGAGCTCATTCTCATGATTGAGAAGAATCTGCATTCCCAGAAAGACCGCAAT
GCCTTGATTCGCACGAGCCCGCGTTTCGCCCTCATGTTCGACGAGAAACTATACAAGAGCTGCTCAGCACAGGAA
CACAGCTATATTATCCTATGGGCAGCTAAGCGAGGCCTGGAGGGCACCATACACAAGTGCCTGAAGGCTGGCGCT
AAAATTCCACGGCGAGATAGATTCAGGTCTCATTTGATCGATCGCGACGCACCCGAGTCTTTGAGTGTCATCCCA
CGGCACCCCAAATCACACCCATTGACCGCAGCAGCCGAATTTGGCTCACTGTCTTGCGTCAATCTTTTCCTTGAG
AAAGGCGTCAATCCCAACTTGTTGGATGAACATTACGAAACTCCACTGAGACAGGCTGCAGGAAATGGCCATGTC
AATGTCGTTGAGTTGTTACTTTCCAGCGATGCTCTCGCATTCACGGGTGCCTTCAAGTTGCGACGACCTCTGAAG
ATTGCTGCGGCTCGCGGTCATTTACCCGTGCTCAAGGCGCTGTTCTCTTTCCTTGGGAGTGGCGATCGAAATCTC
ACCGTCAAAGATGCTGCCCAGATCATCCTGTACGAGGGACTCTGGCACAGCAAAGTAAGTGTTGTCAGGTATGCA
CTCAAACAGGGTGCGGATGTGAATGACGAAAATTCCGAGTTCGTGTTGCGGTTCGCTCCAGATCTACGCCCAGAC
GATCCCCCCGAGAAAACACGATCAAGATTGGTCCAAGGTCACAAGATCGGAGTGACAGTTCGAGGGATCCCCACC
GCAGGCTGGTCGAACCTCATCCCCAATACCCTCCACGCTGCGCTCGTTGGTGGTGATAGGAGGCTGATTGATTTG
ATCATTGACACTGGTTATGATATTACTCAAATTGGGTCCATCCTGCGGTATGCAGTCCTTCGGAGAGAGAACGTA
CTCATCAGTAAGTTGATGAATATGGGGGTCAACATCACCTCCAAAATTCTTTATGAGTCCGTTTGTGGTGAAGAT
TTGGTTATGAAGGAGTTCATGAAGACGACCTTGGAGAAGACTATGGAAGAACTGGGACTCAATAATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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