© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g6702.t1 |
| Gene name | |
| Location | scaffold_18:274269..276021 |
| Strand | + |
| Gene length (bp) | 1752 |
| Transcript length (bp) | 1491 |
| Coding sequence length (bp) | 1491 |
| Protein length (aa) | 497 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05978 | UNC-93 | Ion channel regulatory protein UNC-93 | 2.3E-10 | 85 | 398 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 3.6E-10 | 86 | 422 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 51 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 47 | 69 | 22 |
| 2 | 79 | 98 | 19 |
| 3 | 105 | 124 | 19 |
| 4 | 134 | 156 | 22 |
| 5 | 168 | 187 | 19 |
| 6 | 202 | 221 | 19 |
| 7 | 259 | 276 | 17 |
| 8 | 296 | 313 | 17 |
| 9 | 326 | 345 | 19 |
| 10 | 375 | 397 | 22 |
| 11 | 438 | 460 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g6702.t1 MDERKTPVESSSEPEYIPRPAGWMYKSGKIGKFSTGWYASPRIQLGMVAFVCFLCPGMFNALSGMGGGGKSDPSL ADKMNIALNSTFAVVGFFAGTVVNRVGVRLSLSFGGIGYCIYSISLLVSEHRYVPGFNIFAGAFLGVCAGLLWGA QGTIMMSYPTEQQKGRYFAWFWAIFNIGACIGSLIPLGQNIHVTSNKTVGDGTYIAFIVLMFAGACLALFICDAD KVVRTDGSRVILMKHPSWKSEIVGLWETVRSEPWIVLLFPMFWSSNWFYTYQQNSINGAYFNTRTKALNGFLYWF AQIVAACIMGPLLDSERVRRTIRARAALVGLFILTVVIWGSGYAWQRRYTREDVDAKITGFQGWDWTTKGYVGPM FLYFFYGMYDAAWQGVVYWIMGALGNSGRKLANLAGFYKGLQSAGAAVMWSLDEKKLPYMNEYASNFGLLCGSIL IAVPVVFFKIKDSVPVEDDIQGTDETLEDVLPLGAVESKRVGEEKI* |
| Coding | >Pro_DTO377G3_2|g6702.t1 ATGGATGAACGGAAGACTCCCGTCGAATCTTCCTCCGAACCTGAATACATACCCCGACCCGCAGGATGGATGTAC AAGTCTGGGAAGATCGGCAAGTTCTCTACCGGCTGGTATGCCTCGCCACGCATCCAGTTGGGTATGGTCGCCTTT GTCTGCTTCCTCTGCCCAGGCATGTTTAACGCCTTGAGCGGGATGGGCGGTGGTGGCAAGTCCGACCCAAGCTTG GCTGACAAAATGAACATCGCCCTGAACAGTACCTTCGCCGTCGTGGGTTTCTTCGCCGGAACCGTCGTCAACCGT GTCGGCGTCCGTCTTTCTCTCTCCTTCGGTGGAATCGGTTACTGCATTTACTCCATTAGTCTCCTGGTCTCCGAG CATCGATATGTCCCCGGTTTCAACATCTTCGCCGGCGCCTTCCTCGGTGTCTGCGCAGGTCTACTCTGGGGCGCC CAGGGCACCATCATGATGTCCTACCCGACTGAGCAGCAGAAGGGCCGTTACTTCGCCTGGTTCTGGGCTATCTTC AACATCGGCGCCTGTATCGGTAGCTTGATTCCCCTGGGCCAAAACATCCACGTCACGTCAAACAAGACTGTCGGC GACGGTACCTACATCGCCTTTATCGTACTCATGTTTGCAGGCGCCTGTCTTGCTCTGTTCATCTGTGACGCAGAC AAGGTTGTGCGTACCGACGGCTCGCGCGTCATCCTGATGAAGCACCCCTCTTGGAAGTCCGAGATCGTCGGCCTG TGGGAGACAGTCCGCTCGGAGCCGTGGATCGTCCTCCTGTTCCCCATGTTCTGGTCCTCCAACTGGTTCTACACA TACCAGCAGAACTCTATCAACGGCGCCTACTTCAACACGCGCACCAAGGCCCTGAACGGCTTCCTGTACTGGTTT GCGCAGATCGTGGCCGCTTGTATCATGGGCCCTCTGCTTGATTCGGAGCGCGTCCGTCGTACTATTCGTGCTAGG GCAGCCTTGGTCGGCCTTTTCATCCTCACGGTCGTTATTTGGGGTAGTGGGTACGCCTGGCAGAGGAGGTACACC CGTGAGGATGTGGACGCGAAAATCACAGGTTTCCAGGGCTGGGATTGGACTACCAAGGGCTACGTTGGTCCTATG TTCCTTTACTTCTTCTACGGCATGTACGATGCTGCCTGGCAGGGTGTTGTCTACTGGATCATGGGCGCCCTCGGT AACTCCGGTCGCAAGCTCGCCAACTTGGCAGGCTTCTACAAGGGTCTGCAATCCGCCGGTGCGGCCGTTATGTGG TCGTTGGACGAGAAGAAGCTGCCGTATATGAACGAATATGCCTCGAACTTCGGTCTTCTGTGCGGGTCGATCCTC ATTGCTGTCCCTGTTGTCTTTTTCAAGATCAAGGACTCGGTTCCCGTGGAGGATGATATTCAGGGAACTGACGAG ACACTTGAGGACGTGCTGCCGCTTGGCGCTGTTGAGTCAAAGCGTGTTGGCGAGGAGAAGATCTAA |
| Transcript | >Pro_DTO377G3_2|g6702.t1 ATGGATGAACGGAAGACTCCCGTCGAATCTTCCTCCGAACCTGAATACATACCCCGACCCGCAGGATGGATGTAC AAGTCTGGGAAGATCGGCAAGTTCTCTACCGGCTGGTATGCCTCGCCACGCATCCAGTTGGGTATGGTCGCCTTT GTCTGCTTCCTCTGCCCAGGCATGTTTAACGCCTTGAGCGGGATGGGCGGTGGTGGCAAGTCCGACCCAAGCTTG GCTGACAAAATGAACATCGCCCTGAACAGTACCTTCGCCGTCGTGGGTTTCTTCGCCGGAACCGTCGTCAACCGT GTCGGCGTCCGTCTTTCTCTCTCCTTCGGTGGAATCGGTTACTGCATTTACTCCATTAGTCTCCTGGTCTCCGAG CATCGATATGTCCCCGGTTTCAACATCTTCGCCGGCGCCTTCCTCGGTGTCTGCGCAGGTCTACTCTGGGGCGCC CAGGGCACCATCATGATGTCCTACCCGACTGAGCAGCAGAAGGGCCGTTACTTCGCCTGGTTCTGGGCTATCTTC AACATCGGCGCCTGTATCGGTAGCTTGATTCCCCTGGGCCAAAACATCCACGTCACGTCAAACAAGACTGTCGGC GACGGTACCTACATCGCCTTTATCGTACTCATGTTTGCAGGCGCCTGTCTTGCTCTGTTCATCTGTGACGCAGAC AAGGTTGTGCGTACCGACGGCTCGCGCGTCATCCTGATGAAGCACCCCTCTTGGAAGTCCGAGATCGTCGGCCTG TGGGAGACAGTCCGCTCGGAGCCGTGGATCGTCCTCCTGTTCCCCATGTTCTGGTCCTCCAACTGGTTCTACACA TACCAGCAGAACTCTATCAACGGCGCCTACTTCAACACGCGCACCAAGGCCCTGAACGGCTTCCTGTACTGGTTT GCGCAGATCGTGGCCGCTTGTATCATGGGCCCTCTGCTTGATTCGGAGCGCGTCCGTCGTACTATTCGTGCTAGG GCAGCCTTGGTCGGCCTTTTCATCCTCACGGTCGTTATTTGGGGTAGTGGGTACGCCTGGCAGAGGAGGTACACC CGTGAGGATGTGGACGCGAAAATCACAGGTTTCCAGGGCTGGGATTGGACTACCAAGGGCTACGTTGGTCCTATG TTCCTTTACTTCTTCTACGGCATGTACGATGCTGCCTGGCAGGGTGTTGTCTACTGGATCATGGGCGCCCTCGGT AACTCCGGTCGCAAGCTCGCCAACTTGGCAGGCTTCTACAAGGGTCTGCAATCCGCCGGTGCGGCCGTTATGTGG TCGTTGGACGAGAAGAAGCTGCCGTATATGAACGAATATGCCTCGAACTTCGGTCTTCTGTGCGGGTCGATCCTC ATTGCTGTCCCTGTTGTCTTTTTCAAGATCAAGGACTCGGTTCCCGTGGAGGATGATATTCAGGGAACTGACGAG ACACTTGAGGACGTGCTGCCGCTTGGCGCTGTTGAGTCAAAGCGTGTTGGCGAGGAGAAGATCTAA |
| Gene | >Pro_DTO377G3_2|g6702.t1 ATGGATGAACGGAAGACTCCCGTCGAATCTTCCTCCGAACCTGAATACATACCCCGACCCGCAGGATGGATGTAC AAGTCTGGGAAGATCGGCAAGTTCTCTACCGGCTGGTATGCCTCGCCACGCATCCAGTTGGGTATGGTCGCCTTT GTCTGCTTCCTCTGCCCAGGCATGTTTAACGCCTTGAGCGGGATGGGCGGTGGTGGCAAGTCCGACCCAAGCTTG GCTGACAAAATGGTATGATTGGACCTCGGCACTTGTTCTCTATCTCGTCTCCACTCTTCCCATTTGATACTCCGA AACTCCGATTGGATCGCGTTCTATATGCACAATCTAACAAGTTGTCAACAACAGAACATCGCCCTGAACAGTACC TTCGCCGTCGTGGGTTTCTTCGCCGGAACCGTCGTCAACCGTGTCGGCGTCCGTCTTTCTCTCTCCTTCGGTGGA ATCGGTTACTGCATTTACTCCATTAGTCTCCTGGTCTCCGAGCATCGATATGTCCCCGGTTTCAACATCTTCGCC GGCGCCTTCCTCGGTGTCTGCGCAGGTCTACTCTGGGGCGCCCAGGGCACCATCATGATGTCCTACCCGACTGAG CAGCAGAAGGGCCGTTACTTCGCCTGGTTCTGGGCTATCTTCAACATCGGCGCCTGTATCGGTAGCTTGGTAAGA CCAGCCCAGCCCCTGATACCTAGCCCTATACTTGCAATTGGCTAGACCATCCATCAACAACAACTAACAATGTCA ATCTAAAGATTCCCCTGGGCCAAAACATCCACGTCACGTCAAACAAGACTGTCGGCGACGGTACCTACATCGCCT TTATCGTACTCATGTTTGCAGGCGCCTGTCTTGCTCTGTTCATCTGTGACGCAGACAAGGTTGTGCGTACCGACG GCTCGCGCGTCATCCTGATGAAGCACCCCTCTTGGAAGTCCGAGATCGTCGGCCTGTGGGAGACAGTCCGCTCGG AGCCGTGGATCGTCCTCCTGTTCCCCATGTTCTGGTCCTCCAACTGGTTCTACACATACCAGCAGAACTCTATCA ACGGCGCCTACTTCAACACGCGCACCAAGGCCCTGAACGGCTTCCTGTACTGGTTTGCGCAGATCGTGGCCGCTT GTATCATGGGCCCTCTGCTTGATTCGGAGCGCGTCCGTCGTACTATTCGTGCTAGGGCAGCCTTGGTCGGCCTTT TCATCCTCACGGTCGTTATTTGGGGTAGTGGGTACGCCTGGCAGAGGAGGTACACCCGTGAGGATGTGGACGCGA AAATCACAGGTTTCCAGGGCTGGGATTGGACTACCAAGGGCTACGTTGGTCCTATGTTCCTTTACTTCTTCTACG GCATGTACGATGCTGCCTGGCAGGGTGTTGTCTACTGGTAAGAATCCCTCCCTCTTTTCCCCTGACATGCTGACT AACATTGTTTCTTCTAGGATCATGGGCGCCCTCGGTAACTCCGGTCGCAAGCTCGCCAACTTGGCAGGCTTCTAC AAGGGTCTGCAATCCGCCGGTGCGGCCGTTATGTGGTCGTTGGACGAGAAGAAGCTGCCGTATATGAACGAATAT GCCTCGAACTTCGGTCTTCTGTGCGGGTCGATCCTCATTGCTGTCCCTGTTGTCTTTTTCAAGATCAAGGACTCG GTTCCCGTGGAGGATGATATTCAGGGAACTGACGAGACACTTGAGGACGTGCTGCCGCTTGGCGCTGTTGAGTCA AAGCGTGTTGGCGAGGAGAAGATCTAA |