Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6699.t1
Gene name
Locationscaffold_18:267005..268473
Strand+
Gene length (bp)1468
Transcript length (bp)1350
Coding sequence length (bp)1350
Protein length (aa) 450

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07967 zf-C3HC C3HC zinc finger-like 2.3E-36 92 234
PF08600 Rsm1 Rsm1-like 7.6E-32 292 382

GO

GO Term Description Terminal node
GO:0005634 nucleus Yes
GO:0008270 zinc ion binding Yes
GO:0046914 transition metal ion binding No
GO:0003674 molecular_function No
GO:0043169 cation binding No
GO:0046872 metal ion binding No
GO:0005488 binding No
GO:0044424 intracellular part No
GO:0005575 cellular_component No
GO:0043229 intracellular organelle No
GO:0043227 membrane-bounded organelle No
GO:0043167 ion binding No
GO:0043226 organelle No
GO:0044464 cell part No
GO:0043231 intracellular membrane-bounded organelle No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6699.t1
MSYALESKKRKFHRVLESISKPLTSDNAPKPAPTAPATAQDRLSANLSIKKVRLASADRSELTAVRNSIHKISRP
GHRIASATSNKRPTFVPWDRERFLERLETFRRVDRWTSKPSPINEVQWAKRGWICTDVMRVTCVSDCGGAVVVKL
PDEIDELDGFNIEKVEERKEVRARLVDEYAKMLSNAHGENCPWRNKSCDSTIQHLPLTNCDTALSGLHMRYTNIL
EMGDKLPADDIIQTPEGLDLDVLIKGLPDEWFKETEKAAVSMNGEIRPTDIDNQDSTETSKAVNRAALALALLGW
DTASDGAAGLVGCGACFRRLGLWMYKPKDNGDVTVYTSLNVADEHMEYCPWIDKVAQSGTGRPNERLEELRAGWQ
IVAEAVKVKHRRRVRTMASTDTLRTDLCTPTETAGQEENADAKKKADREWWAKIRRVRQVLTAKSPKRKAVLPQ*
Coding >Pro_DTO377G3_2|g6699.t1
ATGTCCTACGCTCTAGAATCAAAGAAGCGGAAGTTCCACCGTGTTCTCGAATCAATATCCAAACCTCTTACGTCC
GACAACGCGCCTAAACCAGCCCCTACGGCGCCTGCGACGGCGCAAGACCGTCTCTCCGCCAACTTATCGATCAAG
AAAGTACGCTTGGCCAGCGCCGACCGTTCGGAGCTCACAGCGGTGCGCAACTCAATCCACAAGATATCGCGACCA
GGGCACCGAATAGCCTCCGCAACTTCGAATAAGCGCCCAACCTTTGTCCCTTGGGACCGCGAACGTTTTCTCGAG
CGGTTAGAGACCTTCCGCCGTGTCGACCGATGGACGTCAAAGCCGTCTCCGATCAATGAAGTGCAATGGGCGAAG
CGTGGTTGGATCTGTACAGACGTCATGCGCGTCACCTGCGTGAGTGATTGCGGCGGCGCAGTCGTTGTGAAGCTC
CCCGATGAAATCGATGAGCTCGACGGTTTCAACATTGAAAAGGTGGAGGAGCGGAAGGAAGTCCGTGCGAGGCTG
GTGGATGAGTATGCAAAAATGCTAAGTAATGCTCACGGCGAAAACTGTCCCTGGCGAAACAAGAGCTGTGATTCC
ACTATCCAACATCTCCCTTTGACCAATTGTGATACTGCCCTGTCGGGCCTTCACATGCGATATACAAACATCTTG
GAAATGGGCGATAAATTACCAGCTGATGATATCATTCAGACTCCAGAAGGCCTTGACCTTGATGTGCTTATCAAA
GGACTTCCGGACGAATGGTTTAAAGAGACCGAGAAAGCTGCGGTATCCATGAACGGAGAGATTCGGCCTACAGAC
ATTGACAACCAAGACTCAACAGAAACATCCAAAGCTGTCAATCGAGCTGCCCTGGCGTTAGCATTGCTCGGCTGG
GATACTGCCTCCGATGGAGCTGCGGGATTAGTCGGATGTGGAGCGTGTTTCCGTCGCCTGGGATTATGGATGTAC
AAACCCAAAGATAATGGAGACGTCACCGTCTACACTTCCCTCAATGTGGCCGATGAGCATATGGAGTATTGTCCC
TGGATCGACAAGGTAGCCCAAAGTGGCACTGGGCGACCCAACGAGAGGTTGGAAGAACTACGTGCTGGGTGGCAG
ATCGTCGCGGAGGCCGTAAAGGTCAAACACCGCCGCAGAGTTCGTACCATGGCCTCCACTGATACATTGCGGACC
GACCTATGCACACCAACCGAGACTGCAGGCCAAGAAGAAAATGCGGATGCGAAAAAGAAAGCGGACCGCGAATGG
TGGGCGAAAATTCGACGAGTAAGACAGGTTTTGACGGCTAAGTCACCAAAACGGAAAGCTGTCTTGCCTCAATGA
Transcript >Pro_DTO377G3_2|g6699.t1
ATGTCCTACGCTCTAGAATCAAAGAAGCGGAAGTTCCACCGTGTTCTCGAATCAATATCCAAACCTCTTACGTCC
GACAACGCGCCTAAACCAGCCCCTACGGCGCCTGCGACGGCGCAAGACCGTCTCTCCGCCAACTTATCGATCAAG
AAAGTACGCTTGGCCAGCGCCGACCGTTCGGAGCTCACAGCGGTGCGCAACTCAATCCACAAGATATCGCGACCA
GGGCACCGAATAGCCTCCGCAACTTCGAATAAGCGCCCAACCTTTGTCCCTTGGGACCGCGAACGTTTTCTCGAG
CGGTTAGAGACCTTCCGCCGTGTCGACCGATGGACGTCAAAGCCGTCTCCGATCAATGAAGTGCAATGGGCGAAG
CGTGGTTGGATCTGTACAGACGTCATGCGCGTCACCTGCGTGAGTGATTGCGGCGGCGCAGTCGTTGTGAAGCTC
CCCGATGAAATCGATGAGCTCGACGGTTTCAACATTGAAAAGGTGGAGGAGCGGAAGGAAGTCCGTGCGAGGCTG
GTGGATGAGTATGCAAAAATGCTAAGTAATGCTCACGGCGAAAACTGTCCCTGGCGAAACAAGAGCTGTGATTCC
ACTATCCAACATCTCCCTTTGACCAATTGTGATACTGCCCTGTCGGGCCTTCACATGCGATATACAAACATCTTG
GAAATGGGCGATAAATTACCAGCTGATGATATCATTCAGACTCCAGAAGGCCTTGACCTTGATGTGCTTATCAAA
GGACTTCCGGACGAATGGTTTAAAGAGACCGAGAAAGCTGCGGTATCCATGAACGGAGAGATTCGGCCTACAGAC
ATTGACAACCAAGACTCAACAGAAACATCCAAAGCTGTCAATCGAGCTGCCCTGGCGTTAGCATTGCTCGGCTGG
GATACTGCCTCCGATGGAGCTGCGGGATTAGTCGGATGTGGAGCGTGTTTCCGTCGCCTGGGATTATGGATGTAC
AAACCCAAAGATAATGGAGACGTCACCGTCTACACTTCCCTCAATGTGGCCGATGAGCATATGGAGTATTGTCCC
TGGATCGACAAGGTAGCCCAAAGTGGCACTGGGCGACCCAACGAGAGGTTGGAAGAACTACGTGCTGGGTGGCAG
ATCGTCGCGGAGGCCGTAAAGGTCAAACACCGCCGCAGAGTTCGTACCATGGCCTCCACTGATACATTGCGGACC
GACCTATGCACACCAACCGAGACTGCAGGCCAAGAAGAAAATGCGGATGCGAAAAAGAAAGCGGACCGCGAATGG
TGGGCGAAAATTCGACGAGTAAGACAGGTTTTGACGGCTAAGTCACCAAAACGGAAAGCTGTCTTGCCTCAATGA
Gene >Pro_DTO377G3_2|g6699.t1
ATGTCCTACGCTCTAGAATCAAAGAAGCGGAAGTTCCACCGTGTTCTCGAATCAATATCCAAACCTCTTACGTCC
GACAACGCGCCTAAACCAGCCCCTACGGCGCCTGCGACGGCGCAAGACCGTCTCTCCGCCAACTTATCGATCAAG
AAAGTACGCTTGGCCAGCGCCGACCGTTCGGAGCTCACAGCGGTGCGCAACTCAATCCACAAGATATCGCGACCA
GGGCACCGAATAGCCTCCGCAACTTCGAATAAGCGCCCAACCTTTGTCCCTTGGGACCGCGAACGTTTTCTCGAG
CGGTTAGAGACCTTCCGCCGTGTCGACCGATGGACGTCAAAGCCGTCTCCGATCAATGAAGTGCAATGGGCGAAG
CGTGGTTGGATCTGTACAGACGTCATGCGCGTCACCTGCGTGAGTGATTGCGGCGGCGCAGTCGTTGTGAAGCTC
CCCGATGAAATCGATGAGCTCGACGGTTTCAACATTGAAAAGGTGGAGGAGCGGAAGGAAGTCCGTGAGTAATAC
AACAGATCTCTGATCTAGCTGATTGAGGTTTTATACTAACCTATATGCCTACAGGTGCGAGGCTGGTGGATGAGT
ATGCAAAAATGCTAAGTAATGCTCACGGCGAAAACTGTCCCTGGCGAAACAAGAGCTGTGATTGTGAGTTCAAAT
AAGACTGAGAACATTTTGTCCTATGACTAACATCAGATTAGCCACTATCCAACATCTCCCTTTGACCAATTGTGA
TACTGCCCTGTCGGGCCTTCACATGCGATATACAAACATCTTGGAAATGGGCGATAAATTACCAGCTGATGATAT
CATTCAGACTCCAGAAGGCCTTGACCTTGATGTGCTTATCAAAGGACTTCCGGACGAATGGTTTAAAGAGACCGA
GAAAGCTGCGGTATCCATGAACGGAGAGATTCGGCCTACAGACATTGACAACCAAGACTCAACAGAAACATCCAA
AGCTGTCAATCGAGCTGCCCTGGCGTTAGCATTGCTCGGCTGGGATACTGCCTCCGATGGAGCTGCGGGATTAGT
CGGATGTGGAGCGTGTTTCCGTCGCCTGGGATTATGGATGTACAAACCCAAAGATAATGGAGACGTCACCGTCTA
CACTTCCCTCAATGTGGCCGATGAGCATATGGAGTATTGTCCCTGGATCGACAAGGTAGCCCAAAGTGGCACTGG
GCGACCCAACGAGAGGTTGGAAGAACTACGTGCTGGGTGGCAGATCGTCGCGGAGGCCGTAAAGGTCAAACACCG
CCGCAGAGTTCGTACCATGGCCTCCACTGATACATTGCGGACCGACCTATGCACACCAACCGAGACTGCAGGCCA
AGAAGAAAATGCGGATGCGAAAAAGAAAGCGGACCGCGAATGGTGGGCGAAAATTCGACGAGTAAGACAGGTTTT
GACGGCTAAGTCACCAAAACGGAAAGCTGTCTTGCCTCAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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