© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g6698.t1 |
| Gene name | |
| Location | scaffold_18:265100..266663 |
| Strand | - |
| Gene length (bp) | 1563 |
| Transcript length (bp) | 1491 |
| Coding sequence length (bp) | 1491 |
| Protein length (aa) | 497 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02628 | COX15-CtaA | Cytochrome oxidase assembly protein | 1.4E-116 | 100 | 457 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016653 | oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor | Yes |
| GO:0016021 | integral component of membrane | Yes |
| GO:0006784 | heme A biosynthetic process | Yes |
| GO:0019438 | aromatic compound biosynthetic process | No |
| GO:0042440 | pigment metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0046160 | heme a metabolic process | No |
| GO:0006779 | porphyrin-containing compound biosynthetic process | No |
| GO:0008152 | metabolic process | No |
| GO:0016651 | oxidoreductase activity, acting on NAD(P)H | No |
| GO:0006778 | porphyrin-containing compound metabolic process | No |
| GO:0005575 | cellular_component | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:1901566 | organonitrogen compound biosynthetic process | No |
| GO:0044271 | cellular nitrogen compound biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0006783 | heme biosynthetic process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0009987 | cellular process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0018130 | heterocycle biosynthetic process | No |
| GO:0016491 | oxidoreductase activity | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0033013 | tetrapyrrole metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0042168 | heme metabolic process | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0046148 | pigment biosynthetic process | No |
| GO:0033014 | tetrapyrrole biosynthetic process | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 35 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 98 | 120 | 22 |
| 2 | 184 | 203 | 19 |
| 3 | 210 | 232 | 22 |
| 4 | 252 | 274 | 22 |
| 5 | 310 | 332 | 22 |
| 6 | 381 | 403 | 22 |
| 7 | 416 | 438 | 22 |
| 8 | 443 | 465 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g6698.t1 MASLRSSLSLWRSGAPRLAKDFFTSQCLPSQGYAAKSIRQFGALQFRQPSKIQSTLLNNKKFFTSSIKRSNAAPA IAEAVEEGTTKGKSSFPKISDKTVAYWLLGSAASVFGIVVFGGLTRLTESGLSITEWRPVTGSLPPMNAEHWEDE FSKYRASPEFQLLNPNMTLSEFKSIYYMEWIHRLWGRFVGISFVLPAVYFVARKKVSTPMAWRIFGIAGLIGFQG FLGWWMVKSGLKDDLFAPGSHPRVSQYRLTAHLGAAFVCYTAMLWNGLAILRSNRLMADPAAGVNQLNALRDPKL AFFRRSVAGIALLVFITVISGGLVAGLDAGLIYNEFPWMGQGLAPPKEELFDARYSRHEDRSDLWWRNMLENPSL VQLDHRVLAVTTFTVICALMAYTRGSPTMKRFLPAPARKGVHGVFAFACCQVGLGISTLLYLVPTPLASAHQAGS LFLLTWVIILGSRVWHPSRTAKLLQMAAKARSQQLSKTAASAVKRV* |
| Coding | >Pro_DTO377G3_2|g6698.t1 ATGGCTTCTCTGAGGAGCTCTCTGTCGCTATGGCGGAGTGGTGCGCCTCGTTTGGCCAAAGACTTTTTCACATCC CAATGCCTCCCAAGTCAGGGCTACGCAGCCAAATCAATCCGCCAATTCGGTGCCCTCCAGTTCCGTCAACCCAGC AAGATTCAATCGACCCTTCTGAACAATAAGAAATTCTTCACCTCCAGTATCAAGCGTTCAAATGCCGCACCGGCC ATTGCAGAGGCGGTGGAAGAAGGCACAACGAAAGGCAAATCGAGCTTCCCCAAAATTAGCGACAAGACCGTTGCC TACTGGCTACTAGGCAGCGCGGCCAGTGTTTTTGGAATTGTGGTCTTCGGTGGTTTGACACGGTTGACAGAATCT GGATTGAGTATCACCGAATGGCGACCTGTTACTGGCTCCCTCCCTCCAATGAATGCGGAACATTGGGAGGACGAA TTCTCAAAATACCGCGCCTCTCCCGAGTTTCAATTGCTTAACCCGAACATGACTCTATCCGAGTTCAAGTCGATC TACTATATGGAATGGATTCACCGGCTCTGGGGCCGGTTTGTTGGAATCTCATTTGTGCTACCCGCAGTCTATTTT GTCGCTCGAAAGAAGGTCTCCACGCCCATGGCGTGGCGCATCTTTGGAATTGCTGGTCTTATTGGTTTCCAGGGA TTCCTTGGCTGGTGGATGGTAAAATCTGGCTTGAAGGATGATCTCTTTGCTCCGGGCAGTCACCCGCGAGTGAGC CAATATCGTCTGACTGCTCACTTGGGTGCTGCTTTCGTTTGCTACACCGCGATGTTGTGGAATGGTCTCGCTATT CTGCGGTCTAATCGGTTGATGGCTGACCCGGCTGCTGGAGTCAACCAACTTAATGCGCTGCGCGACCCGAAGCTG GCCTTCTTCCGCCGCTCAGTCGCTGGTATTGCTCTCTTGGTCTTCATAACTGTTATTTCAGGCGGTCTCGTCGCC GGTCTTGATGCTGGGCTTATCTATAACGAATTCCCATGGATGGGCCAAGGACTAGCACCTCCAAAGGAGGAGCTG TTCGATGCCCGCTACTCCCGCCACGAGGACCGCTCCGATCTTTGGTGGCGCAACATGCTTGAGAATCCTTCTCTT GTTCAGCTTGACCACCGCGTCCTCGCAGTGACCACCTTCACCGTCATTTGTGCCTTGATGGCTTACACCCGCGGC TCCCCCACCATGAAGCGCTTCCTACCGGCACCTGCTAGAAAGGGTGTCCACGGCGTGTTTGCGTTTGCGTGTTGT CAAGTTGGACTCGGTATTAGTACTCTTCTCTACCTCGTGCCCACTCCGCTTGCCTCCGCCCACCAGGCTGGAAGC TTGTTCCTCCTGACCTGGGTCATAATCTTGGGCAGCCGAGTCTGGCATCCTTCACGTACAGCCAAGCTCTTGCAG ATGGCTGCGAAAGCTCGCTCCCAGCAGCTCTCTAAAACTGCTGCCTCTGCTGTAAAGAGAGTCTAA |
| Transcript | >Pro_DTO377G3_2|g6698.t1 ATGGCTTCTCTGAGGAGCTCTCTGTCGCTATGGCGGAGTGGTGCGCCTCGTTTGGCCAAAGACTTTTTCACATCC CAATGCCTCCCAAGTCAGGGCTACGCAGCCAAATCAATCCGCCAATTCGGTGCCCTCCAGTTCCGTCAACCCAGC AAGATTCAATCGACCCTTCTGAACAATAAGAAATTCTTCACCTCCAGTATCAAGCGTTCAAATGCCGCACCGGCC ATTGCAGAGGCGGTGGAAGAAGGCACAACGAAAGGCAAATCGAGCTTCCCCAAAATTAGCGACAAGACCGTTGCC TACTGGCTACTAGGCAGCGCGGCCAGTGTTTTTGGAATTGTGGTCTTCGGTGGTTTGACACGGTTGACAGAATCT GGATTGAGTATCACCGAATGGCGACCTGTTACTGGCTCCCTCCCTCCAATGAATGCGGAACATTGGGAGGACGAA TTCTCAAAATACCGCGCCTCTCCCGAGTTTCAATTGCTTAACCCGAACATGACTCTATCCGAGTTCAAGTCGATC TACTATATGGAATGGATTCACCGGCTCTGGGGCCGGTTTGTTGGAATCTCATTTGTGCTACCCGCAGTCTATTTT GTCGCTCGAAAGAAGGTCTCCACGCCCATGGCGTGGCGCATCTTTGGAATTGCTGGTCTTATTGGTTTCCAGGGA TTCCTTGGCTGGTGGATGGTAAAATCTGGCTTGAAGGATGATCTCTTTGCTCCGGGCAGTCACCCGCGAGTGAGC CAATATCGTCTGACTGCTCACTTGGGTGCTGCTTTCGTTTGCTACACCGCGATGTTGTGGAATGGTCTCGCTATT CTGCGGTCTAATCGGTTGATGGCTGACCCGGCTGCTGGAGTCAACCAACTTAATGCGCTGCGCGACCCGAAGCTG GCCTTCTTCCGCCGCTCAGTCGCTGGTATTGCTCTCTTGGTCTTCATAACTGTTATTTCAGGCGGTCTCGTCGCC GGTCTTGATGCTGGGCTTATCTATAACGAATTCCCATGGATGGGCCAAGGACTAGCACCTCCAAAGGAGGAGCTG TTCGATGCCCGCTACTCCCGCCACGAGGACCGCTCCGATCTTTGGTGGCGCAACATGCTTGAGAATCCTTCTCTT GTTCAGCTTGACCACCGCGTCCTCGCAGTGACCACCTTCACCGTCATTTGTGCCTTGATGGCTTACACCCGCGGC TCCCCCACCATGAAGCGCTTCCTACCGGCACCTGCTAGAAAGGGTGTCCACGGCGTGTTTGCGTTTGCGTGTTGT CAAGTTGGACTCGGTATTAGTACTCTTCTCTACCTCGTGCCCACTCCGCTTGCCTCCGCCCACCAGGCTGGAAGC TTGTTCCTCCTGACCTGGGTCATAATCTTGGGCAGCCGAGTCTGGCATCCTTCACGTACAGCCAAGCTCTTGCAG ATGGCTGCGAAAGCTCGCTCCCAGCAGCTCTCTAAAACTGCTGCCTCTGCTGTAAAGAGAGTCTAA |
| Gene | >Pro_DTO377G3_2|g6698.t1 ATGGCTTCTCTGAGGAGCTCTCTGTCGCTATGGCGGAGTGGTGCGCCTCGTTTGGCCAAAGACTTTTTCACATCC CAATGCCTCCCAAGTCAGGGCTACGCAGCCAAATCAATCCGCCAATTCGGTGCCCTCCAGTTCCGTCAACCCAGC AAGATTCAATCGACCCTTCTGAACAATAAGAAATTCTTCACCTCCAGTATCAAGCGTTCAAATGCCGCACCGGCC ATTGCAGAGGCGGTGGAAGAAGGCACAACGAAAGGCAAATCGAGCTTCCCCAAAATTAGCGACAAGACCGTTGCC TACTGGCTACTAGGCAGCGCGGCCAGTGTTTTTGGAATTGTGGTCTTCGGTGGTTTGACACGGTTGACAGAATCT GGGTAGGTGGACCGAGGTGCTTGTTTTCCACGAAAAGTGAGCTTCGAATGCTGACGGAACATATTCTGGCACAGA TTGAGTATCACCGAATGGCGACCTGTTACTGGCTCCCTCCCTCCAATGAATGCGGAACATTGGGAGGACGAATTC TCAAAATACCGCGCCTCTCCCGAGTTTCAATTGCTTAACCCGAACATGACTCTATCCGAGTTCAAGTCGATCTAC TATATGGAATGGATTCACCGGCTCTGGGGCCGGTTTGTTGGAATCTCATTTGTGCTACCCGCAGTCTATTTTGTC GCTCGAAAGAAGGTCTCCACGCCCATGGCGTGGCGCATCTTTGGAATTGCTGGTCTTATTGGTTTCCAGGGATTC CTTGGCTGGTGGATGGTAAAATCTGGCTTGAAGGATGATCTCTTTGCTCCGGGCAGTCACCCGCGAGTGAGCCAA TATCGTCTGACTGCTCACTTGGGTGCTGCTTTCGTTTGCTACACCGCGATGTTGTGGAATGGTCTCGCTATTCTG CGGTCTAATCGGTTGATGGCTGACCCGGCTGCTGGAGTCAACCAACTTAATGCGCTGCGCGACCCGAAGCTGGCC TTCTTCCGCCGCTCAGTCGCTGGTATTGCTCTCTTGGTCTTCATAACTGTTATTTCAGGCGGTCTCGTCGCCGGT CTTGATGCTGGGCTTATCTATAACGAATTCCCATGGATGGGCCAAGGACTAGCACCTCCAAAGGAGGAGCTGTTC GATGCCCGCTACTCCCGCCACGAGGACCGCTCCGATCTTTGGTGGCGCAACATGCTTGAGAATCCTTCTCTTGTT CAGCTTGACCACCGCGTCCTCGCAGTGACCACCTTCACCGTCATTTGTGCCTTGATGGCTTACACCCGCGGCTCC CCCACCATGAAGCGCTTCCTACCGGCACCTGCTAGAAAGGGTGTCCACGGCGTGTTTGCGTTTGCGTGTTGTCAA GTTGGACTCGGTATTAGTACTCTTCTCTACCTCGTGCCCACTCCGCTTGCCTCCGCCCACCAGGCTGGAAGCTTG TTCCTCCTGACCTGGGTCATAATCTTGGGCAGCCGAGTCTGGCATCCTTCACGTACAGCCAAGCTCTTGCAGATG GCTGCGAAAGCTCGCTCCCAGCAGCTCTCTAAAACTGCTGCCTCTGCTGTAAAGAGAGTCTAA |