Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6691.t1
Gene name
Locationscaffold_18:247313..249351
Strand-
Gene length (bp)2038
Transcript length (bp)927
Coding sequence length (bp)927
Protein length (aa) 309

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13639 zf-RING_2 Ring finger domain 5.3E-08 133 180

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 64 0.45

Transmembrane Domains

Domain # Start End Length
1 219 241 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6691.t1
MSTYEIEHNTTDPSTAPTARRRRPDLSTFFSTLSQITPAPDHRPHAVPVPGDVSAAFFSLAEALDMMRREADSAP
RPDAQEGTDSDTGRDLLTTMIQSLLAQADMPPRKVEGVDEEFCDMLERVPKASLKSSDNCPICNNPFVEDPYPLV
VQLPCHPTHRFDLECVRPWLRLRGTCPLDRVDFAQQQRDKAEAKKKLVEEDEEEEWDAYPTTPMSPPLETLALVF
FFLLLGMTVMIMMILVKEWTEYQAMQFWPKLRSTRTLDLESGLYLLRDVKELTWRVEQIETDFGRKMHLAEYLCE
YHDQPPSA*
Coding >Pro_DTO377G3_2|g6691.t1
ATGTCGACCTACGAAATCGAACACAACACTACCGACCCCTCAACGGCCCCAACCGCGCGCCGCCGCCGCCCCGAC
CTCTCCACCTTCTTCTCAACCCTGTCCCAGATCACTCCAGCTCCCGACCACAGACCCCATGCAGTCCCCGTCCCA
GGAGATGTGAGCGCAGCATTCTTCTCTCTCGCAGAGGCGTTGGATATGATGCGTCGCGAGGCCGATTCAGCGCCG
CGCCCCGACGCGCAGGAAGGCACCGACTCAGATACCGGTCGCGATCTGCTGACCACGATGATCCAGTCGCTGCTC
GCGCAGGCGGATATGCCGCCGCGGAAGGTGGAGGGTGTTGACGAGGAATTCTGTGATATGCTCGAACGCGTCCCA
AAAGCATCCCTCAAAAGCTCCGATAACTGCCCTATCTGCAACAACCCCTTCGTGGAAGATCCCTACCCGCTCGTC
GTCCAGCTGCCCTGCCACCCGACACACCGCTTCGATCTGGAATGTGTGCGGCCGTGGCTGCGGCTGCGCGGGACG
TGTCCGCTTGACCGTGTGGACTTTGCACAGCAGCAGAGAGACAAGGCGGAGGCGAAAAAGAAGCTTGTTGAGGAG
GATGAGGAGGAGGAATGGGATGCCTATCCAACCACCCCAATGTCTCCCCCGCTGGAGACTCTCGCGCTTGTCTTC
TTTTTTCTATTACTGGGAATGACCGTCATGATAATGATGATTCTTGTCAAGGAGTGGACCGAGTACCAAGCTATG
CAGTTTTGGCCGAAACTGCGTAGTACTCGCACTCTCGATCTGGAGTCGGGCCTTTATTTACTAAGGGACGTAAAG
GAACTGACATGGCGCGTTGAGCAGATAGAAACTGATTTTGGTCGCAAGATGCACCTCGCTGAATACTTGTGTGAA
TACCATGATCAACCCCCATCTGCTTAA
Transcript >Pro_DTO377G3_2|g6691.t1
ATGTCGACCTACGAAATCGAACACAACACTACCGACCCCTCAACGGCCCCAACCGCGCGCCGCCGCCGCCCCGAC
CTCTCCACCTTCTTCTCAACCCTGTCCCAGATCACTCCAGCTCCCGACCACAGACCCCATGCAGTCCCCGTCCCA
GGAGATGTGAGCGCAGCATTCTTCTCTCTCGCAGAGGCGTTGGATATGATGCGTCGCGAGGCCGATTCAGCGCCG
CGCCCCGACGCGCAGGAAGGCACCGACTCAGATACCGGTCGCGATCTGCTGACCACGATGATCCAGTCGCTGCTC
GCGCAGGCGGATATGCCGCCGCGGAAGGTGGAGGGTGTTGACGAGGAATTCTGTGATATGCTCGAACGCGTCCCA
AAAGCATCCCTCAAAAGCTCCGATAACTGCCCTATCTGCAACAACCCCTTCGTGGAAGATCCCTACCCGCTCGTC
GTCCAGCTGCCCTGCCACCCGACACACCGCTTCGATCTGGAATGTGTGCGGCCGTGGCTGCGGCTGCGCGGGACG
TGTCCGCTTGACCGTGTGGACTTTGCACAGCAGCAGAGAGACAAGGCGGAGGCGAAAAAGAAGCTTGTTGAGGAG
GATGAGGAGGAGGAATGGGATGCCTATCCAACCACCCCAATGTCTCCCCCGCTGGAGACTCTCGCGCTTGTCTTC
TTTTTTCTATTACTGGGAATGACCGTCATGATAATGATGATTCTTGTCAAGGAGTGGACCGAGTACCAAGCTATG
CAGTTTTGGCCGAAACTGCGTAGTACTCGCACTCTCGATCTGGAGTCGGGCCTTTATTTACTAAGGGACGTAAAG
GAACTGACATGGCGCGTTGAGCAGATAGAAACTGATTTTGGTCGCAAGATGCACCTCGCTGAATACTTGTGTGAA
TACCATGATCAACCCCCATCTGCTTAA
Gene >Pro_DTO377G3_2|g6691.t1
ATGTCGACCTACGAAAGTACGAATCCCCATCTCTCAAATGAACCTAAAATTCTAAAGCTGACATCATTCCAGTCG
AACACAACACTACCGACCCCTCAACGGCCCCAACCGCGCGCCGCCGCCGCCCCGACCTCTCCACCTTCTTCTCAA
CCCTGTCCCAGATCACTCCAGCTCCCGACCACAGACCCCATGCAGTCCCCGTCCCAGGAGATGTGAGCGCAGCAT
TCTTCTCTCTCGCAGAGGCGTTGGATATGATGCGTCGCGAGGCCGATTCAGCGCCGCGCCCCGACGCGCAGGAAG
GCACCGACTCAGATACCGGTCGCGATCTGCTGACCACGATGATCCAGTCGCTGCTCGCGCAGGCGGATATGCCGC
CGCGGAAGGTGGAGGGTGTTGACGAGGAATTCTGTGATAGTAAGAAGCACTCCCCTAGCTCGCCGCGCCCATCAA
CCTCTCCCGAGATCAGCGGGGTATTCCTTTGTCCATCACATAACTAACCACTCTTGGATCTCTTTAGTGCTCGAA
CGCGTCCCAAAAGCATCCCTCAAAAGCTCCGATAACTGCCCTATCTGCAACAACCCCTTCGTGGAAGATCCCTAC
CCGCTCGTCGTCCAGCTGCCCTGCCACCCGACACACCGCTTCGATCTGGAATGTGTGCGGCCGTGGCTGCGGCTG
CGCGGGACGTGTCCGCTTGACCGTGTGGACTTTGCACAGCAGCAGAGAGACAAGGCGGAGGCGAAAAAGAAGCTT
GTTGAGGAGGATGAGGAGGAGGAATGGGATGGTATGTATGGCTGAAGAGATCCTACACGAGACTATGTATCTAGG
TGCATCGTGAACTGTCTTCTGTAATGGAGACGAGACTACATGGCAGTATTGCCTATCTTAGCATGAGTGAATGAC
TGTTGCATCTGTCGATCATGTACATTTTGATCGAATGGATATTGGAAGTAAGCTGACCGGCCACCATGTTGATCG
TTGTGCCTCTTCGCCCTTAATCCATATCATGACCAATTCCTCGAATCCTGGTTTAATGTGCATATTCACGAACAG
TCTGTCAGGTTTTGGCTGTTAGATGTTATTTTGGAGCTGAATCGCTTTTGACAACGTATGATACTCCCGAGAAGA
CATAAGCCACCAAACAGATCAATAATGTAAAAATATAGTAGAGGAGGACAACAATGGTGTTTTGCTGTATGATCT
ATACGCCTTAGATCCGAAAATACATTGGCACCTTCATTTCGAGTCAAGATCGAGATACGCCTATCCACGAGTCCT
TTGTTTCCTCGTTAGCCTTCATACTCTAACTGATAGTACTAATTAAGCCTGCTTCAAAGACCTTTGTCCTCTCTT
TGATCAATTTTTTGGACAGCTTCATTCATTCCTTTGTCTATTTTTTTGACTACTTTCCTAACAATGGGCATACAA
CTTCATATGAAGCTGCAGTCCTCGTGGGATCTTCCCGCTGCTCACATATAAATATCAAGTCCTCAAGACCCGATT
CATCTCATTTATCATTCCAGATGACATTCTCTTCAAGTCATACCATCTTCCACTGTACTCACAGACTGTGACAGG
ACTTCTTCTGCGGATTACCACATATTATCGGGTATTTTCTACTCCCATTCCTCCCTATGCAACTTTATCTACTTG
CTTACTCTTTAAGTTACTATCACCACGTTTATGAATCTCAACCACAAATTGGCAATCCAGATACTTATCAGTGAG
TATCCCAGCCTATCCAACCACCCCAATGTCTCCCCCGCTGGAGACTCTCGCGCTTGTCTTCTTTTTTCTATTACT
GGGAATGACCGTCATGATAATGATGATTCTTGTCAAGGAGTGGACCGAGTACCAAGCTATGCAGTTTTGGCCGAA
ACTGCGTAGTACTCGCACTCTCGATCTGGAGTCGGGCCTTTATTTACTAAGGGACGTAAAGGAACTGACATGGCG
CGTTGAGCAGATAGAAACTGATTTTGGTCGCAAGATGCACCTCGCTGAATACTTGTGTGAATACCATGATCAACC
CCCATCTGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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