© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g6680.t1 |
| Gene name | |
| Location | scaffold_18:205916..206597 |
| Strand | + |
| Gene length (bp) | 681 |
| Transcript length (bp) | 681 |
| Coding sequence length (bp) | 681 |
| Protein length (aa) | 227 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13417 | GST_N_3 | Glutathione S-transferase, N-terminal domain | 1.4E-11 | 10 | 87 |
| PF13409 | GST_N_2 | Glutathione S-transferase, N-terminal domain | 1.1E-10 | 13 | 83 |
| PF02798 | GST_N | Glutathione S-transferase, N-terminal domain | 2.3E-09 | 4 | 82 |
| PF14497 | GST_C_3 | Glutathione S-transferase, C-terminal domain | 3.5E-07 | 133 | 209 |
| PF00043 | GST_C | Glutathione S-transferase, C-terminal domain | 2.4E-06 | 147 | 192 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005515 | protein binding | Yes |
| GO:0005488 | binding | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g6680.t1 MTDTVTLHTYFRSSCSARLRIALYLKQVPFTPVYVNLLKGEQSSPAHLAINPSGTVPALVIQHDSKAPITITQSL AALEYLEEAFPEQGPALLPPASDPETRAAVRTLADIISCDIQPVTNLRILKRVGQLGAERADWAKDLMEDGFRVY EAVVKKSAGKFSVGDSITIADLCLIPAAWGAQRFGVDLGQFPVTNEIVKNLEMEEAVKKGHWRSQGDTPDEFRIK E* |
| Coding | >Pro_DTO377G3_2|g6680.t1 ATGACCGACACAGTCACTCTCCACACCTATTTCCGCTCCTCCTGCTCTGCCAGGCTCCGGATAGCCCTGTACTTG AAGCAAGTTCCTTTCACGCCCGTCTACGTGAATCTCCTAAAGGGCGAGCAATCCTCCCCAGCCCATCTGGCCATC AACCCCTCAGGAACAGTGCCAGCCCTAGTAATCCAGCACGACTCAAAAGCGCCAATTACAATCACGCAATCTCTG GCTGCACTTGAGTACCTCGAGGAAGCCTTCCCAGAGCAAGGGCCCGCCTTGCTCCCCCCAGCCTCGGATCCAGAG ACCCGCGCGGCAGTGCGCACGTTGGCGGACATTATCTCCTGCGATATACAACCTGTTACGAACTTGAGGATTCTC AAGCGGGTTGGACAGCTGGGGGCTGAACGTGCTGATTGGGCAAAGGATTTGATGGAGGATGGCTTTAGGGTTTAC GAAGCTGTTGTTAAGAAATCGGCGGGGAAGTTTAGCGTTGGAGATTCCATTACCATTGCGGATTTGTGCTTGATT CCTGCTGCCTGGGGAGCTCAGCGGTTTGGTGTTGACCTGGGTCAATTCCCGGTTACGAATGAGATTGTGAAGAAC TTGGAGATGGAAGAGGCGGTTAAGAAGGGGCATTGGAGATCACAGGGCGATACCCCCGATGAGTTTCGTATTAAG GAATAG |
| Transcript | >Pro_DTO377G3_2|g6680.t1 ATGACCGACACAGTCACTCTCCACACCTATTTCCGCTCCTCCTGCTCTGCCAGGCTCCGGATAGCCCTGTACTTG AAGCAAGTTCCTTTCACGCCCGTCTACGTGAATCTCCTAAAGGGCGAGCAATCCTCCCCAGCCCATCTGGCCATC AACCCCTCAGGAACAGTGCCAGCCCTAGTAATCCAGCACGACTCAAAAGCGCCAATTACAATCACGCAATCTCTG GCTGCACTTGAGTACCTCGAGGAAGCCTTCCCAGAGCAAGGGCCCGCCTTGCTCCCCCCAGCCTCGGATCCAGAG ACCCGCGCGGCAGTGCGCACGTTGGCGGACATTATCTCCTGCGATATACAACCTGTTACGAACTTGAGGATTCTC AAGCGGGTTGGACAGCTGGGGGCTGAACGTGCTGATTGGGCAAAGGATTTGATGGAGGATGGCTTTAGGGTTTAC GAAGCTGTTGTTAAGAAATCGGCGGGGAAGTTTAGCGTTGGAGATTCCATTACCATTGCGGATTTGTGCTTGATT CCTGCTGCCTGGGGAGCTCAGCGGTTTGGTGTTGACCTGGGTCAATTCCCGGTTACGAATGAGATTGTGAAGAAC TTGGAGATGGAAGAGGCGGTTAAGAAGGGGCATTGGAGATCACAGGGCGATACCCCCGATGAGTTTCGTATTAAG GAATAG |
| Gene | >Pro_DTO377G3_2|g6680.t1 ATGACCGACACAGTCACTCTCCACACCTATTTCCGCTCCTCCTGCTCTGCCAGGCTCCGGATAGCCCTGTACTTG AAGCAAGTTCCTTTCACGCCCGTCTACGTGAATCTCCTAAAGGGCGAGCAATCCTCCCCAGCCCATCTGGCCATC AACCCCTCAGGAACAGTGCCAGCCCTAGTAATCCAGCACGACTCAAAAGCGCCAATTACAATCACGCAATCTCTG GCTGCACTTGAGTACCTCGAGGAAGCCTTCCCAGAGCAAGGGCCCGCCTTGCTCCCCCCAGCCTCGGATCCAGAG ACCCGCGCGGCAGTGCGCACGTTGGCGGACATTATCTCCTGCGATATACAACCTGTTACGAACTTGAGGATTCTC AAGCGGGTTGGACAGCTGGGGGCTGAACGTGCTGATTGGGCAAAGGATTTGATGGAGGATGGCTTTAGGGTTTAC GAAGCTGTTGTTAAGAAATCGGCGGGGAAGTTTAGCGTTGGAGATTCCATTACCATTGCGGATTTGTGCTTGATT CCTGCTGCCTGGGGAGCTCAGCGGTTTGGTGTTGACCTGGGTCAATTCCCGGTTACGAATGAGATTGTGAAGAAC TTGGAGATGGAAGAGGCGGTTAAGAAGGGGCATTGGAGATCACAGGGCGATACCCCCGATGAGTTTCGTATTAAG GAATAG |