Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6673.t1
Gene name
Locationscaffold_18:191214..192320
Strand+
Gene length (bp)1106
Transcript length (bp)1029
Coding sequence length (bp)1029
Protein length (aa) 343

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 2.9E-08 23 116

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 37 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6673.t1
MVSLPDVQSSNAHIADTLPAGLVAVFVGATSGIGEAALKEFARSARSPRAYFIGRSQEAAARITAECRQLNPEGE
FTFIKADVSLIRNVDKVCRELQNKEKSINILFLSCGTIRSGEDTSEGLHILGAAAYYARTRFIINLLPNLKQATG
LRRVVSVLAGGHEGPIDVTDFQGRTMSMLKLRGHVVSMTDMVLETLAEQAPEVSFIIDYPGAVKTGIGRESNTFL
TWLMNVVLMVIGPLVYIPIRESGERHLFFATSAKYPPRVCLDAAGNSAGVPLSEEVEVASGTDGKVGSGVYTIHW
NGEHAGPKVVKLLAGLRAEGMAQKVWQHTVGEFDRIIGSKDV*
Coding >Pro_DTO377G3_2|g6673.t1
ATGGTCTCTCTACCAGACGTCCAGTCCTCAAATGCCCACATCGCCGACACACTCCCAGCAGGCCTCGTGGCAGTC
TTCGTAGGCGCAACAAGCGGCATCGGCGAAGCAGCCTTAAAAGAGTTCGCCCGCTCAGCACGATCGCCCCGCGCA
TACTTCATCGGCCGGTCGCAAGAAGCCGCAGCCCGCATCACAGCCGAATGCCGACAGCTGAACCCGGAGGGAGAA
TTTACCTTCATCAAAGCGGACGTCAGTTTGATTCGGAACGTCGACAAGGTCTGTCGCGAGCTTCAAAACAAAGAA
AAGAGTATCAACATCCTCTTCCTCAGCTGTGGAACTATTCGTTCCGGAGAAGATACATCCGAAGGCCTCCACATC
TTGGGTGCAGCTGCATACTACGCTCGAACACGATTCATCATCAACCTCCTCCCCAATCTCAAACAAGCAACGGGC
CTACGGCGCGTGGTCAGCGTTCTCGCCGGCGGCCATGAAGGTCCCATCGACGTGACTGACTTCCAAGGAAGGACG
ATGTCAATGCTGAAGCTACGTGGACATGTGGTGTCCATGACTGATATGGTTTTGGAAACACTGGCCGAGCAAGCG
CCAGAAGTGTCATTTATTATCGATTACCCTGGCGCAGTCAAGACGGGCATTGGGCGCGAGTCCAATACTTTTCTG
ACCTGGCTTATGAATGTCGTGCTCATGGTTATCGGGCCTTTGGTTTACATCCCGATTCGGGAGTCCGGGGAGAGA
CATCTTTTCTTTGCGACGAGTGCTAAATATCCTCCCCGTGTCTGCTTGGATGCCGCGGGGAATTCCGCTGGTGTG
CCCTTGTCGGAGGAGGTTGAGGTTGCCAGTGGGACGGATGGGAAGGTTGGGAGTGGTGTTTACACTATTCACTGG
AATGGAGAGCACGCTGGTCCTAAGGTTGTGAAGTTGTTGGCTGGACTTCGCGCGGAGGGGATGGCGCAGAAGGTT
TGGCAGCATACGGTTGGTGAATTTGATAGAATCATAGGGTCGAAGGACGTCTGA
Transcript >Pro_DTO377G3_2|g6673.t1
ATGGTCTCTCTACCAGACGTCCAGTCCTCAAATGCCCACATCGCCGACACACTCCCAGCAGGCCTCGTGGCAGTC
TTCGTAGGCGCAACAAGCGGCATCGGCGAAGCAGCCTTAAAAGAGTTCGCCCGCTCAGCACGATCGCCCCGCGCA
TACTTCATCGGCCGGTCGCAAGAAGCCGCAGCCCGCATCACAGCCGAATGCCGACAGCTGAACCCGGAGGGAGAA
TTTACCTTCATCAAAGCGGACGTCAGTTTGATTCGGAACGTCGACAAGGTCTGTCGCGAGCTTCAAAACAAAGAA
AAGAGTATCAACATCCTCTTCCTCAGCTGTGGAACTATTCGTTCCGGAGAAGATACATCCGAAGGCCTCCACATC
TTGGGTGCAGCTGCATACTACGCTCGAACACGATTCATCATCAACCTCCTCCCCAATCTCAAACAAGCAACGGGC
CTACGGCGCGTGGTCAGCGTTCTCGCCGGCGGCCATGAAGGTCCCATCGACGTGACTGACTTCCAAGGAAGGACG
ATGTCAATGCTGAAGCTACGTGGACATGTGGTGTCCATGACTGATATGGTTTTGGAAACACTGGCCGAGCAAGCG
CCAGAAGTGTCATTTATTATCGATTACCCTGGCGCAGTCAAGACGGGCATTGGGCGCGAGTCCAATACTTTTCTG
ACCTGGCTTATGAATGTCGTGCTCATGGTTATCGGGCCTTTGGTTTACATCCCGATTCGGGAGTCCGGGGAGAGA
CATCTTTTCTTTGCGACGAGTGCTAAATATCCTCCCCGTGTCTGCTTGGATGCCGCGGGGAATTCCGCTGGTGTG
CCCTTGTCGGAGGAGGTTGAGGTTGCCAGTGGGACGGATGGGAAGGTTGGGAGTGGTGTTTACACTATTCACTGG
AATGGAGAGCACGCTGGTCCTAAGGTTGTGAAGTTGTTGGCTGGACTTCGCGCGGAGGGGATGGCGCAGAAGGTT
TGGCAGCATACGGTTGGTGAATTTGATAGAATCATAGGGTCGAAGGACGTCTGA
Gene >Pro_DTO377G3_2|g6673.t1
ATGGTCTCTCTACCAGACGTCCAGTCCTCAAATGCCCACATCGCCGACACACTCCCAGCAGGCCTCGTGGCAGTC
TTCGTAGGCGCAACAAGCGGCATCGGCGAAGCAGCCTTAAAAGAGTTCGCCCGCTCAGCACGATCGCCCCGCGCA
TACTTCATCGGCCGGTCGCAAGAAGCCGCAGCCCGCATCACAGCCGAATGCCGACAGCTGAACCCGGAGGGAGAA
TTTACCTTCATCAAAGCGGACGTCAGTTTGATTCGGAACGTCGACAAGGTCTGTCGCGAGCTTCAAAACAAAGAA
AAGAGTATCAACATCCTCTTCCTCAGCTGTGGAACTATTCGTTCCGGAGAAGGTAGGCAGGACATCCCCACATCC
CTTACAAGAAAATAAAAATAAAAAAAGACATTATTGCTCATAATATGCAAACAGATACATCCGAAGGCCTCCACA
TCTTGGGTGCAGCTGCATACTACGCTCGAACACGATTCATCATCAACCTCCTCCCCAATCTCAAACAAGCAACGG
GCCTACGGCGCGTGGTCAGCGTTCTCGCCGGCGGCCATGAAGGTCCCATCGACGTGACTGACTTCCAAGGAAGGA
CGATGTCAATGCTGAAGCTACGTGGACATGTGGTGTCCATGACTGATATGGTTTTGGAAACACTGGCCGAGCAAG
CGCCAGAAGTGTCATTTATTATCGATTACCCTGGCGCAGTCAAGACGGGCATTGGGCGCGAGTCCAATACTTTTC
TGACCTGGCTTATGAATGTCGTGCTCATGGTTATCGGGCCTTTGGTTTACATCCCGATTCGGGAGTCCGGGGAGA
GACATCTTTTCTTTGCGACGAGTGCTAAATATCCTCCCCGTGTCTGCTTGGATGCCGCGGGGAATTCCGCTGGTG
TGCCCTTGTCGGAGGAGGTTGAGGTTGCCAGTGGGACGGATGGGAAGGTTGGGAGTGGTGTTTACACTATTCACT
GGAATGGAGAGCACGCTGGTCCTAAGGTTGTGAAGTTGTTGGCTGGACTTCGCGCGGAGGGGATGGCGCAGAAGG
TTTGGCAGCATACGGTTGGTGAATTTGATAGAATCATAGGGTCGAAGGACGTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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