© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g6648.t1 |
| Gene name | |
| Location | scaffold_18:132009..133707 |
| Strand | - |
| Gene length (bp) | 1698 |
| Transcript length (bp) | 1638 |
| Coding sequence length (bp) | 1638 |
| Protein length (aa) | 546 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 1.7E-106 | 33 | 498 |
| PF13520 | AA_permease_2 | Amino acid permease | 2.5E-33 | 34 | 487 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 69 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 33 | 55 | 22 |
| 2 | 60 | 82 | 22 |
| 3 | 107 | 129 | 22 |
| 4 | 144 | 166 | 22 |
| 5 | 171 | 193 | 22 |
| 6 | 223 | 245 | 22 |
| 7 | 265 | 282 | 17 |
| 8 | 320 | 342 | 22 |
| 9 | 363 | 385 | 22 |
| 10 | 400 | 422 | 22 |
| 11 | 434 | 456 | 22 |
| 12 | 466 | 488 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g6648.t1 MEKKVFTNVSAEDASTGAVLPYRETKRGLSSRHVQLMAIGGSIGTGLFVGIGSYLRDAGPLSLFLGYLVWGCLFI LPVNLCVGEMAAYLPIRGSIFELAARFIDPAFGFAMGWVYFYGGVMLVCTEYSAVSTIMQYWNTSVNPAVWVAMA MVVCTMLNLVSVKWYGESEFILASTKILLLIGLVLLTFITMVGGNPRHDVYGFRNWTDGVMFEYYTDGTTGRFLG FFSVMVYAAFSIAGPDLPALAAGEIQNPRVTIPRVVKMTFYRIVGFYVIGVLAVTIICSPNDPRLISAISDGAAG SAASPWVIGIQNLGIKGLPDLINFLILLSGWSCGNAYLYSSSRTLYSLARDGQAPKFLLKCTASGIPINCVLTVS VLSCITFLVASTSSVEVFFWFVDLTTIAFVLTYTGMVCVFIAWYRALKAQGIDRKTFVPWAAPWQPYGAILAVII GSTTAICNGFSVFKPFSVQGFITSYFGLAFWVVMFVFWKVYHRSSFVKVAEADLYSGKAEIDEECKIWEEGGWAE RRKAELAQMHWVRRIWEKMW* |
| Coding | >Pro_DTO377G3_2|g6648.t1 ATGGAGAAGAAAGTCTTTACAAATGTTTCCGCCGAGGATGCTAGCACAGGCGCTGTTTTACCCTACCGGGAGACA AAGCGCGGTCTATCATCCCGACATGTGCAACTAATGGCCATTGGAGGCTCAATCGGTACTGGGCTGTTCGTCGGT ATCGGGTCCTACCTGCGGGATGCCGGCCCGCTGTCACTGTTTCTGGGGTATCTTGTTTGGGGGTGCCTCTTCATC TTGCCTGTCAATCTGTGTGTTGGGGAAATGGCCGCATACCTTCCCATTCGTGGGTCGATCTTTGAGCTCGCTGCC CGGTTTATCGACCCGGCATTTGGATTTGCTATGGGCTGGGTATATTTCTACGGTGGTGTAATGCTCGTCTGTACG GAGTATTCTGCAGTCTCAACAATCATGCAATACTGGAACACAAGCGTCAACCCTGCCGTCTGGGTAGCCATGGCA ATGGTTGTTTGCACGATGCTCAATCTTGTCTCGGTCAAATGGTACGGCGAGAGCGAGTTCATCCTAGCGTCGACC AAGATCCTTCTCCTCATCGGACTCGTCCTCCTCACCTTCATCACAATGGTTGGCGGAAACCCCAGGCACGATGTC TATGGCTTCCGGAATTGGACCGATGGCGTCATGTTCGAGTACTATACCGATGGCACCACGGGCCGATTTTTAGGC TTCTTCTCCGTCATGGTCTATGCAGCCTTCTCCATCGCTGGTCCTGATCTCCCAGCCCTAGCCGCAGGAGAGATC CAGAACCCACGAGTGACCATCCCCCGAGTCGTGAAGATGACTTTCTATCGTATCGTGGGATTCTATGTCATCGGA GTCCTAGCTGTCACCATCATCTGCAGCCCCAACGACCCACGTCTCATTTCCGCAATTAGTGACGGTGCTGCTGGC TCCGCTGCTTCGCCTTGGGTCATCGGAATCCAAAACCTTGGCATCAAGGGCCTGCCCGATCTGATCAACTTCTTG ATTCTGCTATCGGGCTGGTCATGTGGCAATGCCTACCTTTACAGCTCCAGCCGAACACTCTATTCCCTCGCTCGC GATGGCCAAGCACCGAAGTTCCTTTTGAAATGTACTGCATCCGGCATCCCCATAAACTGTGTCCTCACGGTCTCG GTTTTGTCTTGCATCACCTTCCTCGTGGCCAGTACCTCTTCCGTCGAGGTCTTCTTCTGGTTCGTTGATTTGACC ACCATCGCCTTCGTTCTCACCTACACGGGCATGGTCTGTGTCTTCATCGCCTGGTACCGCGCCCTGAAAGCACAA GGAATCGACCGCAAGACGTTCGTTCCTTGGGCTGCACCATGGCAGCCATACGGCGCCATTCTCGCTGTCATTATC GGCTCCACGACCGCCATATGCAATGGCTTCTCTGTCTTCAAGCCTTTCAGTGTGCAAGGCTTCATCACCTCGTAC TTCGGTCTAGCGTTCTGGGTCGTCATGTTTGTCTTCTGGAAGGTGTATCACCGGAGTTCGTTTGTGAAAGTTGCA GAGGCAGATTTGTACTCTGGAAAGGCGGAGATCGATGAAGAGTGCAAGATCTGGGAAGAAGGTGGATGGGCCGAA CGGCGGAAGGCGGAGCTGGCTCAGATGCATTGGGTCCGGCGAATTTGGGAGAAAATGTGGTGA |
| Transcript | >Pro_DTO377G3_2|g6648.t1 ATGGAGAAGAAAGTCTTTACAAATGTTTCCGCCGAGGATGCTAGCACAGGCGCTGTTTTACCCTACCGGGAGACA AAGCGCGGTCTATCATCCCGACATGTGCAACTAATGGCCATTGGAGGCTCAATCGGTACTGGGCTGTTCGTCGGT ATCGGGTCCTACCTGCGGGATGCCGGCCCGCTGTCACTGTTTCTGGGGTATCTTGTTTGGGGGTGCCTCTTCATC TTGCCTGTCAATCTGTGTGTTGGGGAAATGGCCGCATACCTTCCCATTCGTGGGTCGATCTTTGAGCTCGCTGCC CGGTTTATCGACCCGGCATTTGGATTTGCTATGGGCTGGGTATATTTCTACGGTGGTGTAATGCTCGTCTGTACG GAGTATTCTGCAGTCTCAACAATCATGCAATACTGGAACACAAGCGTCAACCCTGCCGTCTGGGTAGCCATGGCA ATGGTTGTTTGCACGATGCTCAATCTTGTCTCGGTCAAATGGTACGGCGAGAGCGAGTTCATCCTAGCGTCGACC AAGATCCTTCTCCTCATCGGACTCGTCCTCCTCACCTTCATCACAATGGTTGGCGGAAACCCCAGGCACGATGTC TATGGCTTCCGGAATTGGACCGATGGCGTCATGTTCGAGTACTATACCGATGGCACCACGGGCCGATTTTTAGGC TTCTTCTCCGTCATGGTCTATGCAGCCTTCTCCATCGCTGGTCCTGATCTCCCAGCCCTAGCCGCAGGAGAGATC CAGAACCCACGAGTGACCATCCCCCGAGTCGTGAAGATGACTTTCTATCGTATCGTGGGATTCTATGTCATCGGA GTCCTAGCTGTCACCATCATCTGCAGCCCCAACGACCCACGTCTCATTTCCGCAATTAGTGACGGTGCTGCTGGC TCCGCTGCTTCGCCTTGGGTCATCGGAATCCAAAACCTTGGCATCAAGGGCCTGCCCGATCTGATCAACTTCTTG ATTCTGCTATCGGGCTGGTCATGTGGCAATGCCTACCTTTACAGCTCCAGCCGAACACTCTATTCCCTCGCTCGC GATGGCCAAGCACCGAAGTTCCTTTTGAAATGTACTGCATCCGGCATCCCCATAAACTGTGTCCTCACGGTCTCG GTTTTGTCTTGCATCACCTTCCTCGTGGCCAGTACCTCTTCCGTCGAGGTCTTCTTCTGGTTCGTTGATTTGACC ACCATCGCCTTCGTTCTCACCTACACGGGCATGGTCTGTGTCTTCATCGCCTGGTACCGCGCCCTGAAAGCACAA GGAATCGACCGCAAGACGTTCGTTCCTTGGGCTGCACCATGGCAGCCATACGGCGCCATTCTCGCTGTCATTATC GGCTCCACGACCGCCATATGCAATGGCTTCTCTGTCTTCAAGCCTTTCAGTGTGCAAGGCTTCATCACCTCGTAC TTCGGTCTAGCGTTCTGGGTCGTCATGTTTGTCTTCTGGAAGGTGTATCACCGGAGTTCGTTTGTGAAAGTTGCA GAGGCAGATTTGTACTCTGGAAAGGCGGAGATCGATGAAGAGTGCAAGATCTGGGAAGAAGGTGGATGGGCCGAA CGGCGGAAGGCGGAGCTGGCTCAGATGCATTGGGTCCGGCGAATTTGGGAGAAAATGTGGTGA |
| Gene | >Pro_DTO377G3_2|g6648.t1 ATGGAGAAGAAAGTCTTTACAAATGTTTCCGCCGAGGATGCTAGCACAGGCGCTGTTTTACCCTACCGGGAGACA AAGCGCGGTCTATCATCCCGACATGTGCAACTAATGGCCATTGGAGGCTCAATCGGTACTGGGCTGTTCGTCGGT ATCGGGTCCTACCTGCGGGATGCCGGCCCGCTGTCACTGTTTCTGGGGTATCTTGTTTGGGGGTGCCTCTTCATC TTGCCTGTCAATCTGTGTGTTGGGGAAATGGCCGCATACCTTCCCATTCGTGGGTCGATCTTTGAGCTCGCTGCC CGGTTTATCGACCCGGCATTTGGATTTGCTATGTAAGTCTTTTCGCGCCTGAACCTTGCTGGGCTCTACGCTACA GACGCTAACCCTTCTAGGGGCTGGGTATATTTCTACGGTGGTGTAATGCTCGTCTGTACGGAGTATTCTGCAGTC TCAACAATCATGCAATACTGGAACACAAGCGTCAACCCTGCCGTCTGGGTAGCCATGGCAATGGTTGTTTGCACG ATGCTCAATCTTGTCTCGGTCAAATGGTACGGCGAGAGCGAGTTCATCCTAGCGTCGACCAAGATCCTTCTCCTC ATCGGACTCGTCCTCCTCACCTTCATCACAATGGTTGGCGGAAACCCCAGGCACGATGTCTATGGCTTCCGGAAT TGGACCGATGGCGTCATGTTCGAGTACTATACCGATGGCACCACGGGCCGATTTTTAGGCTTCTTCTCCGTCATG GTCTATGCAGCCTTCTCCATCGCTGGTCCTGATCTCCCAGCCCTAGCCGCAGGAGAGATCCAGAACCCACGAGTG ACCATCCCCCGAGTCGTGAAGATGACTTTCTATCGTATCGTGGGATTCTATGTCATCGGAGTCCTAGCTGTCACC ATCATCTGCAGCCCCAACGACCCACGTCTCATTTCCGCAATTAGTGACGGTGCTGCTGGCTCCGCTGCTTCGCCT TGGGTCATCGGAATCCAAAACCTTGGCATCAAGGGCCTGCCCGATCTGATCAACTTCTTGATTCTGCTATCGGGC TGGTCATGTGGCAATGCCTACCTTTACAGCTCCAGCCGAACACTCTATTCCCTCGCTCGCGATGGCCAAGCACCG AAGTTCCTTTTGAAATGTACTGCATCCGGCATCCCCATAAACTGTGTCCTCACGGTCTCGGTTTTGTCTTGCATC ACCTTCCTCGTGGCCAGTACCTCTTCCGTCGAGGTCTTCTTCTGGTTCGTTGATTTGACCACCATCGCCTTCGTT CTCACCTACACGGGCATGGTCTGTGTCTTCATCGCCTGGTACCGCGCCCTGAAAGCACAAGGAATCGACCGCAAG ACGTTCGTTCCTTGGGCTGCACCATGGCAGCCATACGGCGCCATTCTCGCTGTCATTATCGGCTCCACGACCGCC ATATGCAATGGCTTCTCTGTCTTCAAGCCTTTCAGTGTGCAAGGCTTCATCACCTCGTACTTCGGTCTAGCGTTC TGGGTCGTCATGTTTGTCTTCTGGAAGGTGTATCACCGGAGTTCGTTTGTGAAAGTTGCAGAGGCAGATTTGTAC TCTGGAAAGGCGGAGATCGATGAAGAGTGCAAGATCTGGGAAGAAGGTGGATGGGCCGAACGGCGGAAGGCGGAG CTGGCTCAGATGCATTGGGTCCGGCGAATTTGGGAGAAAATGTGGTGA |