Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6633.t1
Gene name
Locationscaffold_18:97342..98158
Strand-
Gene length (bp)816
Transcript length (bp)711
Coding sequence length (bp)711
Protein length (aa) 237

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13460 NAD_binding_10 NAD(P)H-binding 1.8E-06 8 147
PF01370 Epimerase NAD dependent epimerase/dehydratase family 1.0E-04 6 120

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6633.t1
MVNVALIGGTGMVGSQILTSLIANPVVTRVDTISRRTPSATSGAPPAKLTNFVSSDTATWSSQLSSLSPTPSIFF
SAFGTTKAAAGGFDNQYKIEHGLNVELAKAAHDAGTKVYVLISATGANKDSNFAYPRMKGEIEEDIKKLGFERMV
ILRPGLIAGTREESRPFEAGVRFIANWAGKLNSGLKDGWAQDADVIGKAAVNAGLKALEGDVPEGSEKVWTLFGN
DIIKYGKEGSS*
Coding >Pro_DTO377G3_2|g6633.t1
ATGGTGAACGTCGCATTGATCGGTGGTACTGGTATGGTGGGCTCTCAAATCCTCACCAGCCTTATTGCCAATCCT
GTTGTAACTCGTGTGGACACCATCTCTCGCCGTACCCCGTCAGCCACTAGCGGCGCGCCCCCAGCCAAACTCACC
AACTTTGTCTCTAGCGATACCGCCACCTGGTCAAGCCAGCTCTCCTCCCTAAGCCCGACCCCCAGCATCTTCTTT
TCCGCGTTTGGAACCACAAAAGCAGCCGCAGGCGGGTTCGATAACCAATACAAAATCGAGCATGGGTTGAACGTC
GAGCTGGCCAAGGCCGCCCACGACGCTGGCACCAAGGTCTACGTACTGATCTCCGCTACCGGCGCCAACAAGGAT
TCGAACTTTGCCTACCCCCGCATGAAGGGCGAAATCGAGGAGGATATCAAGAAGCTTGGCTTTGAGCGCATGGTC
ATTCTGCGTCCTGGGCTGATTGCTGGTACTCGTGAGGAAAGCCGGCCGTTTGAGGCTGGAGTTCGGTTCATTGCG
AATTGGGCTGGCAAGCTGAATTCCGGCCTCAAAGATGGATGGGCCCAGGACGCGGATGTTATTGGCAAAGCTGCT
GTCAATGCTGGTCTTAAGGCACTAGAAGGTGATGTTCCCGAGGGCAGTGAGAAGGTTTGGACCTTGTTTGGCAAT
GATATCATCAAATATGGCAAGGAAGGCTCGTCTTAA
Transcript >Pro_DTO377G3_2|g6633.t1
ATGGTGAACGTCGCATTGATCGGTGGTACTGGTATGGTGGGCTCTCAAATCCTCACCAGCCTTATTGCCAATCCT
GTTGTAACTCGTGTGGACACCATCTCTCGCCGTACCCCGTCAGCCACTAGCGGCGCGCCCCCAGCCAAACTCACC
AACTTTGTCTCTAGCGATACCGCCACCTGGTCAAGCCAGCTCTCCTCCCTAAGCCCGACCCCCAGCATCTTCTTT
TCCGCGTTTGGAACCACAAAAGCAGCCGCAGGCGGGTTCGATAACCAATACAAAATCGAGCATGGGTTGAACGTC
GAGCTGGCCAAGGCCGCCCACGACGCTGGCACCAAGGTCTACGTACTGATCTCCGCTACCGGCGCCAACAAGGAT
TCGAACTTTGCCTACCCCCGCATGAAGGGCGAAATCGAGGAGGATATCAAGAAGCTTGGCTTTGAGCGCATGGTC
ATTCTGCGTCCTGGGCTGATTGCTGGTACTCGTGAGGAAAGCCGGCCGTTTGAGGCTGGAGTTCGGTTCATTGCG
AATTGGGCTGGCAAGCTGAATTCCGGCCTCAAAGATGGATGGGCCCAGGACGCGGATGTTATTGGCAAAGCTGCT
GTCAATGCTGGTCTTAAGGCACTAGAAGGTGATGTTCCCGAGGGCAGTGAGAAGGTTTGGACCTTGTTTGGCAAT
GATATCATCAAATATGGCAAGGAAGGCTCGTCTTAA
Gene >Pro_DTO377G3_2|g6633.t1
ATGGTGAACGTCGCATTGATCGGTGGTACTGGTATGGTGGTAAGTGTAAATCCTGCAAGCAAAGCTCCTCGATTT
ACTGGTCTCGAAATTCCCCAAGCCGAGCATACCCAGGCTAGAACTTCAGCTAAATTGCATAACCGATAGGGCTCT
CAAATCCTCACCAGCCTTATTGCCAATCCTGTTGTAACTCGTGTGGACACCATCTCTCGCCGTACCCCGTCAGCC
ACTAGCGGCGCGCCCCCAGCCAAACTCACCAACTTTGTCTCTAGCGATACCGCCACCTGGTCAAGCCAGCTCTCC
TCCCTAAGCCCGACCCCCAGCATCTTCTTTTCCGCGTTTGGAACCACAAAAGCAGCCGCAGGCGGGTTCGATAAC
CAATACAAAATCGAGCATGGGTTGAACGTCGAGCTGGCCAAGGCCGCCCACGACGCTGGCACCAAGGTCTACGTA
CTGATCTCCGCTACCGGCGCCAACAAGGATTCGAACTTTGCCTACCCCCGCATGAAGGGCGAAATCGAGGAGGAT
ATCAAGAAGCTTGGCTTTGAGCGCATGGTCATTCTGCGTCCTGGGCTGATTGCTGGTACTCGTGAGGAAAGCCGG
CCGTTTGAGGCTGGAGTTCGGTTCATTGCGAATTGGGCTGGCAAGCTGAATTCCGGCCTCAAAGATGGATGGGCC
CAGGACGCGGATGTTATTGGCAAAGCTGCTGTCAATGCTGGTCTTAAGGCACTAGAAGGTGATGTTCCCGAGGGC
AGTGAGAAGGTTTGGACCTTGTTTGGCAATGATATCATCAAATATGGCAAGGAAGGCTCGTCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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