© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g6622.t1 |
| Gene name | |
| Location | scaffold_18:72802..74848 |
| Strand | - |
| Gene length (bp) | 2046 |
| Transcript length (bp) | 1653 |
| Coding sequence length (bp) | 1653 |
| Protein length (aa) | 551 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00854 | PTR2 | POT family | 2.8E-75 | 116 | 487 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 57 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 120 | 142 | 22 |
| 2 | 147 | 169 | 22 |
| 3 | 204 | 221 | 17 |
| 4 | 231 | 250 | 19 |
| 5 | 325 | 347 | 22 |
| 6 | 362 | 382 | 20 |
| 7 | 395 | 417 | 22 |
| 8 | 427 | 449 | 22 |
| 9 | 462 | 484 | 22 |
| 10 | 489 | 511 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g6622.t1 MDSVSVDNRRDYSEELDKVDQSPTSLHAGLRRVPDKFPRVALLILVVELGERFTYFGLSGPMQNYINNPYDPGSD LPGALGKGQATASALGNFFKFWAYASTIIGAIVADQYVGKFKAITISLGIYIVGLIILVATATPAGFKSDAGFGG LVAAMVIIGLGTGGIKANVTPMCAEQYQNVEPVLRILKSGERVVVDPEMTVQRLFMWFYWVVNVGALSPLITVNV EAKSSFWLAYLIPLIAIVLSAIVFLSGQKRYVKIPPQGSAIIDACKVLNIARQEKNFENAKPSALEASGHLSKYP FASSPHYTDQYVSDVRRGFRSCRMFIFFPFYFVCWVQIWNNLISQAGQMALHGTPNDLLQNLDPIALCIFIPLLD LGVYPVFRKFKINFSPVRRIFAGFLLVSISMVYASVLQHYIYKSPANSIHVWIQAPAYILVAFSEAFVIVTGLEL AFTHAPKTLRSFISALFWLMIGIAAAICIGLSPVSQDPYLPWMYGSLAIVGFVAGCAFYLCFRKSDSLDPVDPGF VEGVPVEGNGQHVIQIADYGKHSEA* |
| Coding | >Pro_DTO377G3_2|g6622.t1 ATGGACTCTGTCTCAGTCGATAACCGAAGAGACTATTCAGAGGAACTGGACAAAGTTGACCAGTCACCTACTAGT CTCCATGCTGGACTCCGCCGTGTTCCTGACAAATTCCCACGTGTCGCACTATTAATCCTTGTCGTCGAGCTTGGC GAACGGTTCACTTATTTTGGCCTCAGCGGTCCTATGCAAAATTATATCAATAACCCCTATGATCCTGGTTCAGAT CTCCCTGGCGCACTAGGCAAAGGACAAGCAACCGCATCGGCTCTTGGAAACTTCTTTAAATTTTGGGCTTATGCC TCCACCATTATTGGCGCGATTGTTGCAGACCAATACGTCGGCAAATTCAAAGCCATCACAATCTCTTTGGGAATC TACATAGTCGGGTTGATCATCTTGGTTGCAACCGCGACACCAGCTGGCTTTAAGAGCGATGCTGGTTTTGGAGGC TTGGTTGCTGCGATGGTCATCATTGGCCTAGGAACAGGTGGAATCAAGGCCAATGTGACTCCCATGTGCGCGGAG CAATACCAAAATGTAGAGCCGGTGTTAAGGATACTCAAATCAGGCGAACGTGTGGTTGTTGATCCCGAAATGACC GTGCAGCGACTTTTCATGTGGTTCTACTGGGTTGTCAATGTTGGCGCCCTCTCCCCCTTGATTACAGTCAATGTT GAGGCGAAGAGCTCTTTCTGGCTTGCATATTTGATCCCACTGATTGCAATTGTTCTCTCGGCTATCGTCTTCTTG TCCGGCCAGAAACGATATGTTAAGATTCCTCCTCAGGGGTCTGCTATTATTGATGCATGCAAGGTCTTGAACATT GCTCGACAGGAGAAGAATTTTGAAAACGCGAAGCCATCAGCACTAGAGGCCTCAGGACATTTGAGCAAGTATCCA TTTGCATCTTCACCGCACTACACGGATCAGTACGTCTCAGACGTCCGTCGAGGCTTTAGAAGCTGCAGAATGTTT ATATTCTTCCCATTCTATTTTGTTTGCTGGGTCCAGATTTGGAACAATCTTATCTCGCAAGCTGGACAAATGGCG TTGCATGGAACGCCGAACGATCTCCTGCAAAACCTTGACCCGATCGCCTTGTGTATCTTCATCCCACTTCTTGAC TTGGGCGTCTATCCAGTCTTTCGCAAGTTTAAGATCAACTTCAGCCCAGTCCGTCGAATCTTCGCCGGTTTCCTT CTTGTCTCAATCTCCATGGTCTACGCCAGTGTGCTACAGCATTACATTTATAAGTCCCCAGCAAACAGCATACAC GTGTGGATTCAAGCCCCAGCATATATCTTGGTCGCATTCTCCGAGGCCTTTGTTATTGTTACTGGATTGGAGCTT GCCTTCACCCATGCTCCGAAAACCCTTCGATCTTTTATCTCTGCACTTTTCTGGCTCATGATCGGCATTGCGGCG GCGATCTGCATCGGTCTAAGCCCAGTGTCGCAAGATCCGTATCTTCCTTGGATGTATGGATCTCTTGCAATTGTG GGCTTCGTGGCGGGATGTGCGTTTTATCTTTGCTTCAGGAAGAGTGACTCTCTTGATCCAGTAGACCCAGGATTC GTCGAAGGAGTTCCAGTTGAAGGAAACGGGCAGCATGTTATACAGATTGCTGACTATGGCAAACACAGTGAAGCA TAG |
| Transcript | >Pro_DTO377G3_2|g6622.t1 ATGGACTCTGTCTCAGTCGATAACCGAAGAGACTATTCAGAGGAACTGGACAAAGTTGACCAGTCACCTACTAGT CTCCATGCTGGACTCCGCCGTGTTCCTGACAAATTCCCACGTGTCGCACTATTAATCCTTGTCGTCGAGCTTGGC GAACGGTTCACTTATTTTGGCCTCAGCGGTCCTATGCAAAATTATATCAATAACCCCTATGATCCTGGTTCAGAT CTCCCTGGCGCACTAGGCAAAGGACAAGCAACCGCATCGGCTCTTGGAAACTTCTTTAAATTTTGGGCTTATGCC TCCACCATTATTGGCGCGATTGTTGCAGACCAATACGTCGGCAAATTCAAAGCCATCACAATCTCTTTGGGAATC TACATAGTCGGGTTGATCATCTTGGTTGCAACCGCGACACCAGCTGGCTTTAAGAGCGATGCTGGTTTTGGAGGC TTGGTTGCTGCGATGGTCATCATTGGCCTAGGAACAGGTGGAATCAAGGCCAATGTGACTCCCATGTGCGCGGAG CAATACCAAAATGTAGAGCCGGTGTTAAGGATACTCAAATCAGGCGAACGTGTGGTTGTTGATCCCGAAATGACC GTGCAGCGACTTTTCATGTGGTTCTACTGGGTTGTCAATGTTGGCGCCCTCTCCCCCTTGATTACAGTCAATGTT GAGGCGAAGAGCTCTTTCTGGCTTGCATATTTGATCCCACTGATTGCAATTGTTCTCTCGGCTATCGTCTTCTTG TCCGGCCAGAAACGATATGTTAAGATTCCTCCTCAGGGGTCTGCTATTATTGATGCATGCAAGGTCTTGAACATT GCTCGACAGGAGAAGAATTTTGAAAACGCGAAGCCATCAGCACTAGAGGCCTCAGGACATTTGAGCAAGTATCCA TTTGCATCTTCACCGCACTACACGGATCAGTACGTCTCAGACGTCCGTCGAGGCTTTAGAAGCTGCAGAATGTTT ATATTCTTCCCATTCTATTTTGTTTGCTGGGTCCAGATTTGGAACAATCTTATCTCGCAAGCTGGACAAATGGCG TTGCATGGAACGCCGAACGATCTCCTGCAAAACCTTGACCCGATCGCCTTGTGTATCTTCATCCCACTTCTTGAC TTGGGCGTCTATCCAGTCTTTCGCAAGTTTAAGATCAACTTCAGCCCAGTCCGTCGAATCTTCGCCGGTTTCCTT CTTGTCTCAATCTCCATGGTCTACGCCAGTGTGCTACAGCATTACATTTATAAGTCCCCAGCAAACAGCATACAC GTGTGGATTCAAGCCCCAGCATATATCTTGGTCGCATTCTCCGAGGCCTTTGTTATTGTTACTGGATTGGAGCTT GCCTTCACCCATGCTCCGAAAACCCTTCGATCTTTTATCTCTGCACTTTTCTGGCTCATGATCGGCATTGCGGCG GCGATCTGCATCGGTCTAAGCCCAGTGTCGCAAGATCCGTATCTTCCTTGGATGTATGGATCTCTTGCAATTGTG GGCTTCGTGGCGGGATGTGCGTTTTATCTTTGCTTCAGGAAGAGTGACTCTCTTGATCCAGTAGACCCAGGATTC GTCGAAGGAGTTCCAGTTGAAGGAAACGGGCAGCATGTTATACAGATTGCTGACTATGGCAAACACAGTGAAGCA TAG |
| Gene | >Pro_DTO377G3_2|g6622.t1 ATGGACTCTGTCTCAGTCGATAACCGAAGAGACTATTCAGAGGAACTGGACAAAGTTGACCAGTCACCTACTAGT CTCCATGCTGGACTCCGCCGTGTTCCTGACAAATTCCCACGTGTCGCACTATTAATCCTTGTCGTCGAGGTAAGT TGCTCCACCGCCCACGTGTTGATTGCCCTAGCTCGCCCGCTAACATGGACATACTAGCTTGGCGAACGGTTCACT TATTTTGGCCTCAGCGGTCCTATGCAAAATTATATCAAGTATGCTGTCTTTTACAAATGAGTTGATCTTTTGAAA ACAATATCTAACTCCGTTTTTATCTAGTAACCCCTATGATCCTGGTTCAGATCTCCCTGGCGCACTAGGCAAAGG ACAAGCAACCGCATCGGCTCTTGGAAACTTCTTTAAATTTTGGGCTTATGCCTCCACCATTATTGGCGCGATTGT TGCAGGTAATACATCTCCCCTTGAGAGATTGCATCATTGTTATTAATAGTCCACCAGACCAATACGTCGGCAAAT TCAAAGCCATCACAATCTCTTTGGGAATCTACATAGTCGGGTTGATCATCTTGGTTGCAACCGCGACACCAGCTG GCTTTAAGAGCGATGCTGGTTTTGGAGGCTTGGTTGCTGCGATGGTCATCATTGGCCTAGGAACAGGTGGAATCA AGGCCAATGTGACTCCCATGTGCGCGGAGCAATACCAAAATGTAGAGCCGGTGTTAAGGATACTCAAATCAGGCG AACGTGTGGTTGTTGATCCCGAAATGACCGTGCAGCGACTTTTCATGTGGTTCTACTGGGTTGTCAATGTTGGCG CCCTCTCCCCCTTGATTACAGTCAATGTTGAGGCGAAGAGCTCTTTCTGGCTTGCATATTTGATCCCACTGATGT AAGTTGGGATAAGACATATTTGTATTACACACCTGCTAATTTCCTCCAGTGCAATTGTTCTCTCGGCTATCGTCT TCTTGTCCGGCCAGAAACGATATGTTAAGATTCCTCCTCAGGGGTCTGCTATTATTGATGCATGCAAGGTCTTGA ACATTGCTCGACAGGAGAAGAATTTTGAAAACGCGAAGCCATCAGCACTAGAGGCCTCAGGACATTTGAGCAAGT ATCCATTTGCATCTTCACCGCACTACACGGATCAGTACGTCTCAGACGTCCGTCGAGGCTTTAGAAGCTGCAGAG TAAGTTGGGATCTGATACCTCAATACTGAGTTATGCTTACACATAGTATAGATGTTTATATTCTTCCCATTCTAT TTTGTTTGCTGGGTCCAGATTTGGAACAATCTTATCTCGCAAGCTGGACAAATGGCGTTGCATGGAACGCCGAAC GATCTCCTGCAAAACCTTGACCCGATCGCCTTGTGTATCTTCATCCCACTTCTTGACTGTGAGTATTGAATGATG ATACCGAAATAACATCCGCTAACCAATATATCTCTAGTGGGCGTCTATCCAGTCTTTCGCAAGTTTAAGATCAAC TTCAGCCCAGTCCGTCGAATCTTCGCCGGTTTCCTTCTTGTCTCAATCTCCATGGTCTACGCCAGTGTGCTACAG CATTACATTTATAAGTCCCCAGCAAACAGCATACACGTGTGGATTCAAGCCCCAGCATATATCTTGGTCGCATTC TCCGAGGCCTTTGTTATTGTTACTGGATTGGAGCTTGCCTTCACCCATGCTCCGAAAACGTGAGTCAACTGCCCA CATAGTACTATCCTACTCAAACTAACCACAACTTATTTCAGCCTTCGATCTTTTATCTCTGCACTTTTCTGGCTC ATGATCGGCATTGCGGCGGCGATCTGCATCGGTCTAAGCCCAGTGTCGCAAGATCCGTATCTTCCTTGGATGTAT GGATCTCTTGCAATTGTGGGCTTCGTGGCGGGATGTGCGTTTTATCTTTGCTTCAGGAAGAGTGACTCTCTTGAT CCAGTAGACCCAGGATTCGTCGAAGGAGTTCCAGTTGAAGGAAACGGGCAGCATGTTATACAGATTGCTGACTAT GGCAAACACAGTGAAGCATAG |