Protein ID | Pro_DTO377G3_2|g6592.t1 |
Gene name | |
Location | scaffold_18:3601..6305 |
Strand | + |
Gene length (bp) | 2704 |
Transcript length (bp) | 2601 |
Coding sequence length (bp) | 2601 |
Protein length (aa) | 867 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00150 | Cellulase | Cellulase (glycosyl hydrolase family 5) | 1.4E-13 | 507 | 746 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
GO:0071704 | organic substance metabolic process | Yes |
GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
GO:0008150 | biological_process | No |
GO:0008152 | metabolic process | No |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
GO:0016787 | hydrolase activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 27 | 0.45 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 338 | 360 | 22 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 1.78 | 0.48 | 3.07 |
5d_25C | Five days - 25 degrees Celsius | 1.33 | 0.30 | 2.35 |
7d_25C | Seven days - 25 degrees Celsius | 1.44 | 0.22 | 2.65 |
10d_25C | Ten days - 25 degrees Celsius | 0.71 | 0.05 | 1.36 |
7d_15C | Seven days - 15 degrees Celsius | 0.92 | 0.06 | 1.77 |
7d_30C | Seven days - 30 degrees Celsius | 2.35 | 0.58 | 4.11 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.577069 | no |
3d_25C | 7d_25C | 0.712655 | no |
3d_25C | 7d_15C | 0.165913 | no |
3d_25C | 7d_30C | 0.594967 | no |
3d_25C | 10d_25C | 0.056880 | no |
5d_25C | 7d_25C | 0.906249 | no |
5d_25C | 7d_15C | 0.512424 | no |
5d_25C | 7d_30C | 0.221641 | no |
5d_25C | 10d_25C | 0.227496 | no |
7d_25C | 7d_15C | 0.434910 | no |
7d_25C | 7d_30C | 0.336799 | no |
7d_25C | 10d_25C | 0.183254 | no |
7d_15C | 7d_30C | 0.046159 | yes |
7d_15C | 10d_25C | 0.702933 | no |
7d_30C | 10d_25C | 0.014971 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g6592.t1 MPSQSRDRDRPDRRDRDRDRDRDRTREQERLRRDRDREYIRGRYEDTDEGATSSPGNARTAKYRFRGEAGYESNS HNERDDYDEERERRREQRRKRREEEAGLAYEESGEGRRRDRERERGSSRVKGSPAMSPAKRPDRERRYRRDESAS ASPARDRRARDVDLDLEAEARRRRRRERERERERRREVDAAAAAASAKKHRSTESSSSAAHLLSVDAMARLAAEH EDVDRIEKSRGEDDLRRERRRQRKRAALDAAAGAALGAEVAQGHSRHKAGARVVSGAYLEEGHGSDARVRRRGGG GPAVQDHWKDEDSWEGSSDNRGPPAWKFWSNWSRKKRILVGCLLAMLLLLAIIIPVAIVVSKNKGSDSKTSSSSG NSSTTSNLDGISRASIPSYAKGTYLDPFTWYQTEGFNLTFTNATVGGLSLMGINSTWDDTAQANDNVPALNKAFP YGTQPIRGVNLGGWLSIEPFIVPSLFSKWPSSAGIIDEYTLTKKLGSSAAATIEQHYAEFISESDIKEIKEAGLD HVRIPYSYWAVTTYDDDPYVPKIAWRYLLRAIEWCRKYGLRIKLDLHGLPGSQNGWNHSGRQGSIGWLAGTDGTL NRKRSLEIHNQLSQFFAQDRYKNVVTIYGLVNEPLMLTLPTEKVLNWTQEAAELVRKNGITATIVLHDGFLNLAK WDSMFQTHPDNMYLDTHQYTTFNTGEIVLNHTAKVNIICNSWYPMIKEINTTTSGWGPTICGEWSQADTDCAQYL NNVGRGTRWEGTYSTTSTTAYCPTAAEGTCSCSNANEDPSEYSDTYKKFLQTYAEAQMSSFETAMGWFYWTWRTE SAAQWSYRTAWKNGYMPSKAYSPSFKCGDTVPDFTDIAENF* |
Coding | >Pro_DTO377G3_2|g6592.t1 ATGCCCAGCCAATCCCGAGACCGAGACCGACCCGACAGACGCGACCGGGATCGGGATCGGGATCGCGACCGCACA CGTGAGCAAGAGCGCTTGCGCCGAGACCGAGATAGGGAGTACATCCGTGGCCGCTACGAGGACACCGACGAAGGC GCAACGTCCAGTCCTGGCAACGCGCGCACCGCAAAATACCGCTTCCGTGGGGAAGCAGGGTACGAGTCGAACTCG CATAATGAACGCGATGATTATGACGAGGAGCGGGAGCGGCGCAGGGAACAGAGGCGCAAACGGAGGGAGGAAGAG GCTGGACTTGCTTATGAGGAGTCTGGGGAGGGGAGAAGACGGGATAGGGAGCGGGAGAGGGGGAGTTCTAGGGTG AAGGGCTCACCTGCTATGTCGCCTGCTAAACGGCCGGATCGCGAGAGGCGGTACCGCAGAGACGAGAGTGCGAGT GCGAGTCCGGCTAGAGATAGACGGGCCAGGGATGTTGATCTCGACCTTGAGGCTGAGGCGCGTCGGCGGAGACGG CGCGAGCGCGAAAGAGAAAGGGAGCGTCGGCGGGAAGTTGATGCTGCTGCTGCTGCGGCCTCGGCGAAGAAACAT CGCAGCACTGAGTCTTCGAGTAGTGCTGCGCACCTCCTGAGTGTGGACGCTATGGCGCGTCTTGCTGCTGAGCAC GAGGATGTGGACCGTATCGAAAAGTCTCGCGGAGAAGATGACTTGCGTCGGGAACGTCGACGACAGCGGAAGCGA GCTGCTTTGGACGCTGCTGCTGGTGCGGCACTTGGTGCTGAAGTTGCGCAGGGCCACTCACGCCATAAGGCCGGC GCACGAGTTGTGTCTGGTGCTTATTTGGAAGAAGGCCATGGCTCTGATGCTCGGGTTCGTCGTCGTGGCGGTGGT GGACCTGCTGTGCAAGATCATTGGAAAGATGAAGACAGCTGGGAAGGCAGCTCGGACAACCGAGGGCCACCGGCT TGGAAATTTTGGTCTAACTGGTCGAGGAAGAAACGTATCTTGGTCGGATGTCTCCTGGCGATGCTCCTCTTGCTT GCCATCATCATCCCGGTTGCAATTGTTGTGTCAAAAAACAAGGGCTCAGATTCAAAAACGAGTTCCTCCTCCGGG AACAGTTCGACTACCTCTAATTTGGACGGTATCAGCCGCGCAAGCATACCAAGTTACGCCAAGGGCACCTACTTG GATCCATTTACGTGGTACCAGACCGAAGGGTTCAATCTTACGTTCACAAATGCCACTGTGGGTGGCCTTTCCCTT ATGGGCATCAACTCGACTTGGGATGACACTGCCCAGGCGAACGACAATGTGCCTGCTCTTAACAAGGCCTTCCCT TACGGCACACAGCCGATCCGCGGAGTCAATTTAGGCGGATGGCTGTCTATCGAGCCCTTCATTGTCCCGTCTTTG TTCAGCAAGTGGCCATCTAGCGCTGGTATTATCGACGAGTACACCTTGACTAAAAAGCTTGGAAGCTCCGCAGCG GCCACGATTGAGCAGCATTATGCCGAATTCATCTCAGAGTCAGATATAAAAGAGATCAAGGAGGCCGGGCTGGAT CACGTCCGCATCCCATACTCCTATTGGGCCGTGACTACCTACGACGACGACCCATACGTCCCTAAGATTGCGTGG CGTTATCTACTCCGCGCAATCGAGTGGTGCCGCAAATATGGACTACGGATCAAACTCGACCTCCACGGACTGCCT GGCAGTCAAAATGGCTGGAACCATAGCGGCCGGCAGGGCAGCATCGGCTGGTTGGCCGGTACAGACGGTACGCTC AACCGTAAGCGGTCGCTTGAGATTCACAACCAACTCTCGCAGTTCTTTGCCCAAGACCGATATAAGAATGTGGTA ACGATCTACGGTCTGGTGAACGAGCCACTGATGCTCACCCTGCCCACCGAGAAGGTCCTAAATTGGACCCAGGAG GCAGCGGAACTCGTCCGGAAGAATGGTATCACTGCCACTATTGTCCTGCATGATGGGTTTCTGAATCTCGCCAAG TGGGACAGCATGTTCCAAACCCACCCGGACAACATGTACCTCGACACCCATCAATATACTACTTTCAACACGGGT GAGATCGTGTTGAACCACACCGCCAAGGTCAACATTATCTGTAATAGTTGGTACCCTATGATCAAGGAGATCAAC ACGACTACTTCGGGATGGGGTCCAACCATTTGTGGTGAATGGTCGCAGGCAGACACCGACTGCGCGCAGTATTTG AACAACGTCGGCCGAGGTACTCGATGGGAAGGGACCTACTCTACCACTTCCACGACGGCTTATTGCCCAACAGCG GCCGAAGGAACGTGCAGCTGCTCGAATGCGAACGAGGACCCATCGGAATATTCGGATACCTACAAGAAGTTCCTT CAGACATATGCCGAGGCACAGATGTCTTCCTTCGAAACGGCAATGGGATGGTTCTACTGGACCTGGCGGACAGAG TCAGCCGCGCAGTGGAGTTATCGGACCGCATGGAAGAATGGATATATGCCAAGCAAGGCATATAGCCCTTCGTTT AAGTGTGGAGATACAGTGCCTGACTTCACCGATATAGCGGAAAATTTTTGA |
Transcript | >Pro_DTO377G3_2|g6592.t1 ATGCCCAGCCAATCCCGAGACCGAGACCGACCCGACAGACGCGACCGGGATCGGGATCGGGATCGCGACCGCACA CGTGAGCAAGAGCGCTTGCGCCGAGACCGAGATAGGGAGTACATCCGTGGCCGCTACGAGGACACCGACGAAGGC GCAACGTCCAGTCCTGGCAACGCGCGCACCGCAAAATACCGCTTCCGTGGGGAAGCAGGGTACGAGTCGAACTCG CATAATGAACGCGATGATTATGACGAGGAGCGGGAGCGGCGCAGGGAACAGAGGCGCAAACGGAGGGAGGAAGAG GCTGGACTTGCTTATGAGGAGTCTGGGGAGGGGAGAAGACGGGATAGGGAGCGGGAGAGGGGGAGTTCTAGGGTG AAGGGCTCACCTGCTATGTCGCCTGCTAAACGGCCGGATCGCGAGAGGCGGTACCGCAGAGACGAGAGTGCGAGT GCGAGTCCGGCTAGAGATAGACGGGCCAGGGATGTTGATCTCGACCTTGAGGCTGAGGCGCGTCGGCGGAGACGG CGCGAGCGCGAAAGAGAAAGGGAGCGTCGGCGGGAAGTTGATGCTGCTGCTGCTGCGGCCTCGGCGAAGAAACAT CGCAGCACTGAGTCTTCGAGTAGTGCTGCGCACCTCCTGAGTGTGGACGCTATGGCGCGTCTTGCTGCTGAGCAC GAGGATGTGGACCGTATCGAAAAGTCTCGCGGAGAAGATGACTTGCGTCGGGAACGTCGACGACAGCGGAAGCGA GCTGCTTTGGACGCTGCTGCTGGTGCGGCACTTGGTGCTGAAGTTGCGCAGGGCCACTCACGCCATAAGGCCGGC GCACGAGTTGTGTCTGGTGCTTATTTGGAAGAAGGCCATGGCTCTGATGCTCGGGTTCGTCGTCGTGGCGGTGGT GGACCTGCTGTGCAAGATCATTGGAAAGATGAAGACAGCTGGGAAGGCAGCTCGGACAACCGAGGGCCACCGGCT TGGAAATTTTGGTCTAACTGGTCGAGGAAGAAACGTATCTTGGTCGGATGTCTCCTGGCGATGCTCCTCTTGCTT GCCATCATCATCCCGGTTGCAATTGTTGTGTCAAAAAACAAGGGCTCAGATTCAAAAACGAGTTCCTCCTCCGGG AACAGTTCGACTACCTCTAATTTGGACGGTATCAGCCGCGCAAGCATACCAAGTTACGCCAAGGGCACCTACTTG GATCCATTTACGTGGTACCAGACCGAAGGGTTCAATCTTACGTTCACAAATGCCACTGTGGGTGGCCTTTCCCTT ATGGGCATCAACTCGACTTGGGATGACACTGCCCAGGCGAACGACAATGTGCCTGCTCTTAACAAGGCCTTCCCT TACGGCACACAGCCGATCCGCGGAGTCAATTTAGGCGGATGGCTGTCTATCGAGCCCTTCATTGTCCCGTCTTTG TTCAGCAAGTGGCCATCTAGCGCTGGTATTATCGACGAGTACACCTTGACTAAAAAGCTTGGAAGCTCCGCAGCG GCCACGATTGAGCAGCATTATGCCGAATTCATCTCAGAGTCAGATATAAAAGAGATCAAGGAGGCCGGGCTGGAT CACGTCCGCATCCCATACTCCTATTGGGCCGTGACTACCTACGACGACGACCCATACGTCCCTAAGATTGCGTGG CGTTATCTACTCCGCGCAATCGAGTGGTGCCGCAAATATGGACTACGGATCAAACTCGACCTCCACGGACTGCCT GGCAGTCAAAATGGCTGGAACCATAGCGGCCGGCAGGGCAGCATCGGCTGGTTGGCCGGTACAGACGGTACGCTC AACCGTAAGCGGTCGCTTGAGATTCACAACCAACTCTCGCAGTTCTTTGCCCAAGACCGATATAAGAATGTGGTA ACGATCTACGGTCTGGTGAACGAGCCACTGATGCTCACCCTGCCCACCGAGAAGGTCCTAAATTGGACCCAGGAG GCAGCGGAACTCGTCCGGAAGAATGGTATCACTGCCACTATTGTCCTGCATGATGGGTTTCTGAATCTCGCCAAG TGGGACAGCATGTTCCAAACCCACCCGGACAACATGTACCTCGACACCCATCAATATACTACTTTCAACACGGGT GAGATCGTGTTGAACCACACCGCCAAGGTCAACATTATCTGTAATAGTTGGTACCCTATGATCAAGGAGATCAAC ACGACTACTTCGGGATGGGGTCCAACCATTTGTGGTGAATGGTCGCAGGCAGACACCGACTGCGCGCAGTATTTG AACAACGTCGGCCGAGGTACTCGATGGGAAGGGACCTACTCTACCACTTCCACGACGGCTTATTGCCCAACAGCG GCCGAAGGAACGTGCAGCTGCTCGAATGCGAACGAGGACCCATCGGAATATTCGGATACCTACAAGAAGTTCCTT CAGACATATGCCGAGGCACAGATGTCTTCCTTCGAAACGGCAATGGGATGGTTCTACTGGACCTGGCGGACAGAG TCAGCCGCGCAGTGGAGTTATCGGACCGCATGGAAGAATGGATATATGCCAAGCAAGGCATATAGCCCTTCGTTT AAGTGTGGAGATACAGTGCCTGACTTCACCGATATAGCGGAAAATTTTTGA |
Gene | >Pro_DTO377G3_2|g6592.t1 ATGCCCAGCCAATCCCGAGACCGAGACCGACCCGACAGACGCGACCGGGATCGGGATCGGGATCGCGACCGCACA CGTGAGCAAGAGCGCTTGCGCCGAGACCGAGATAGGGAGTACATCCGTGGCCGCTACGAGGACACCGACGAAGGC GCAACGTCCAGTCCTGGCAACGCGCGCACCGCAAAATACCGCTTCCGTGGGGAAGCAGGGTACGAGTCGAACTCG CATAATGAACGCGATGATTATGACGAGGAGCGGGAGCGGCGCAGGGAACAGAGGCGCAAACGGAGGGAGGAAGAG GCTGGACTTGCTTATGAGGAGTCTGGGGAGGGGAGAAGACGGGATAGGGAGCGGGAGAGGGGGAGTTCTAGGGTG AAGGGCTCACCTGCTATGTCGCCTGCTAAACGGCCGGATCGCGAGAGGCGGTACCGCAGAGACGAGAGTGCGAGT GCGAGTCCGGCTAGAGATAGACGGGCCAGGGATGTTGATCTCGACCTTGAGGCTGAGGCGCGTCGGCGGAGACGG CGCGAGCGCGAAAGAGAAAGGGAGCGTCGGCGGGAAGTTGATGCTGCTGCTGCTGCGGCCTCGGCGAAGAAACAT CGCAGCACTGAGTCTTCGAGTAGTGCTGCGCACCTCCTGAGTGTGGACGCTATGGCGCGTCTTGCTGCTGAGCAC GAGGATGTGGACCGTATCGAAAAGTCTCGCGGAGAAGATGACTTGCGTCGGGAACGTCGACGACAGCGGAAGCGA GCTGCTTTGGACGCTGCTGCTGGTGCGGCACTTGGTGCTGAAGTTGCGCAGGGCCACTCACGCCATAAGGCCGGC GCACGAGTTGTGTCTGGTGCTTATTTGGAAGAAGGCCATGGCTCTGATGCTCGGGTTCGTCGTCGTGGCGGTGGT GGACCTGCTGTGCAAGATCATTGGAAAGATGAAGACAGCTGGGAAGGCAGCTCGGACAACCGAGGGCCACCGGCT TGGAAATTTTGGTCTAACTGGTCGAGGAAGAAACGTATCTTGGTCGGATGTCTCCTGGCGATGCTCCTCTTGCTT GCCATCATCATCCCGGTTGCAATTGTTGTGTCAAAAAACAAGGGCTCAGATTCAAAAACGAGTTCCTCCTCCGGG AACAGTTCGACTACCTCTAATTTGGACGGTATCAGCCGCGCAAGCATACCAGTAAGTCTCGAGTGTATCACCTCG ATGGAATTTGCTGACAGCGGTACTTCAGAGTTACGCCAAGGGCACCTACTTGGATCCATTTACGTGGTACCAGAC CGAAGGGTTCAATCTTACGTTCACAAATGCCACTGTGGGTGGCCTTTCCCTTATGGGCATCAACTCGACTTGGGA TGACACTGCCCAGGCGAACGACAATGTGCCTGCTCTTAACAAGGCCTTCCCTTACGGCACACAGCCGATCCGCGG AGTCAATTTAGGCGGATGGCTGTCTATCGAGCCCTTCATTGTCCCGTCTTTGTTCAGCAAGTGGCCATCTAGCGC TGGTATTATCGACGAGTACACCTTGACTAAAAAGCTTGGAAGCTCCGCAGCGGCCACGATTGAGCAGCATTATGC CGAATTCATCTCAGAGTCAGATATAAAAGAGATCAAGGAGGCCGGGCTGGATCACGTCCGCATCCCATACTCCTA TTGGGCCGTGACTACCTACGACGACGACCCATACGTCCCTAAGATTGCGTGGCGTTATCTACTCCGCGCAATCGA GTGGTGCCGCAAATATGGACTACGGATCAAACTCGACCTCCACGGACTGCCTGGCAGTCAAAATGGCTGGAACCA TAGCGGCCGGCAGGGCAGCATCGGCTGGTTGGCCGGTACAGACGGTACGCTCAACCGTAAGCGGTCGCTTGAGAT TCACAACCAACTCTCGCAGTTCTTTGCCCAAGACCGATATAAGAATGTGGTAACGATCTACGGTCTGGTGAACGA GCCACTGATGCTCACCCTGCCCACCGAGAAGGTCCTAAATTGGACCCAGGAGGCAGCGGAACTCGTCCGGAAGAA TGGTATCACTGCCACTATTGTCCTGCATGATGGGTTTCTGAATCTCGCCAAGTGGGACAGCATGTTCCAAACCCA CCCGGACAACATGTACCTCGACACCCATCAATATACTACTTTCAACACGGGTGAGATCGTGTTGAACCACACCGC CAAGGTCAACATTATCTGTAATAGTTGGTACCCTATGATCAAGGAGATCAACACGACTACTTCGGGGTAAATTGA GCTGCCGTCTCTTTGTAATCTCATATGCTAATACACAACCAGATGGGGTCCAACCATTTGTGGTGAATGGTCGCA GGCAGACACCGACTGCGCGCAGTATTTGAACAACGTCGGCCGAGGTACTCGATGGGAAGGGACCTACTCTACCAC TTCCACGACGGCTTATTGCCCAACAGCGGCCGAAGGAACGTGCAGCTGCTCGAATGCGAACGAGGACCCATCGGA ATATTCGGATACCTACAAGAAGTTCCTTCAGACATATGCCGAGGCACAGATGTCTTCCTTCGAAACGGCAATGGG ATGGTTCTACTGGACCTGGCGGACAGAGTCAGCCGCGCAGTGGAGTTATCGGACCGCATGGAAGAATGGATATAT GCCAAGCAAGGCATATAGCCCTTCGTTTAAGTGTGGAGATACAGTGCCTGACTTCACCGATATAGCGGAAAATTT TTGA |