Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6575.t1
Gene name
Locationscaffold_17:561071..562757
Strand-
Gene length (bp)1686
Transcript length (bp)1530
Coding sequence length (bp)1530
Protein length (aa) 510

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01545 Cation_efflux Cation efflux family 1.7E-21 223 413

GO

GO Term Description Terminal node
GO:0006812 cation transport Yes
GO:0055085 transmembrane transport Yes
GO:0008324 cation transmembrane transporter activity Yes
GO:0016021 integral component of membrane Yes
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0015075 ion transmembrane transporter activity No
GO:0044425 membrane part No
GO:0006810 transport No
GO:0005575 cellular_component No
GO:0022857 transmembrane transporter activity No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0006811 ion transport No
GO:0031224 intrinsic component of membrane No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 246 268 22
2 289 311 22
3 326 345 19
4 365 387 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6575.t1
MSSQTFLPIFSPPSSPSPVLRPRRPSLEPEREILSTRGQHILNLFPSRTSSLALNDLDDDTPERRLILRRGSLLI
GHSNPRYEWKRYYKSPESLKNLPKEIRKYHERNNGLISQYLYIDRLLDSSLPHNLIEDYNGCNHHSSGNRILQPS
ALEDNQTEAPEPNPKIGRVKRTPHNLYRIPDETTPLVHSSDAEDSPLEPFPDLESHGGMSLDDEERVINLAIRLN
FVANVALLASKIAIMAMTNSMSMLAGLVDGVLDFLSTVIVWVTTIMIRRQDRNRYPISRRRLEPVSVLIFSVIMV
TSFFQVALSSIKQLIGDDRTVVKLSIPSISLMGGTVLVKLLCWIWCRLIPSPSVQVLAQDAMTDVVFNTFSIIFP
LVGTAANLWYLDPLGGLFLSFYIMWNWGQTAAEYIQRLTGAAASPDDHSVLLYMTMRFSRVIHKIQDLKAYYASD
KLNVEVDLVVDEKISLRDSHDVGESLQYIIESVPTVDRAFVHLDYDEWNLPSHMNQMDR*
Coding >Pro_DTO377G3_2|g6575.t1
ATGTCTTCCCAAACATTTCTTCCGATTTTCTCCCCTCCATCATCGCCTTCGCCCGTTCTACGTCCCCGACGTCCA
AGCCTAGAACCGGAGCGTGAAATTCTTTCCACCAGAGGCCAACACATATTGAACCTTTTCCCTTCTCGTACATCG
AGCCTTGCCTTGAACGATCTCGATGACGATACACCTGAAAGGCGACTTATTCTCAGACGCGGATCGTTGTTGATT
GGACACAGTAATCCTCGATATGAGTGGAAACGCTACTACAAATCACCCGAGTCATTAAAGAATCTTCCAAAGGAA
ATTCGGAAATACCATGAACGAAACAATGGACTGATCTCCCAATATCTCTATATTGACCGACTACTGGATTCTTCG
CTACCCCATAACCTGATCGAAGACTACAATGGATGCAATCACCATTCTTCGGGAAACAGAATTCTTCAGCCGTCT
GCGTTAGAGGATAACCAGACCGAGGCACCAGAACCCAATCCCAAGATCGGAAGGGTCAAACGCACCCCGCATAAT
CTTTATCGGATCCCCGATGAGACGACACCCTTGGTTCATTCTTCCGACGCAGAAGACAGCCCATTGGAGCCATTC
CCTGACCTCGAATCGCATGGTGGAATGTCCCTAGATGACGAGGAGCGCGTCATCAACCTGGCCATTCGCCTCAAT
TTTGTCGCCAACGTTGCTCTCCTAGCTTCAAAGATCGCTATCATGGCAATGACTAACTCCATGTCTATGCTCGCA
GGTCTAGTTGATGGGGTTTTGGACTTTCTTAGCACAGTGATTGTCTGGGTGACCACCATTATGATCCGCCGACAG
GATCGCAACCGGTATCCCATCAGCCGACGCCGGTTAGAGCCTGTCAGTGTGTTGATCTTCTCGGTGATCATGGTG
ACTTCCTTTTTTCAAGTAGCGCTGTCTTCTATCAAACAATTGATTGGGGACGACCGCACGGTTGTTAAGCTATCC
ATCCCATCAATCTCGCTGATGGGCGGTACAGTTTTGGTTAAGCTCCTCTGCTGGATCTGGTGCCGATTGATTCCT
AGCCCAAGCGTCCAGGTCCTGGCCCAGGATGCCATGACTGACGTTGTCTTTAACACGTTCAGCATCATCTTCCCA
CTGGTTGGTACTGCTGCAAATCTCTGGTACTTAGATCCCTTGGGTGGTCTATTCCTCTCCTTCTACATCATGTGG
AACTGGGGTCAGACCGCTGCGGAATACATCCAGCGCCTGACGGGTGCGGCTGCCTCTCCCGACGATCATAGTGTT
TTGCTGTATATGACCATGCGGTTCTCCCGGGTGATTCATAAAATTCAGGACTTGAAAGCCTACTACGCGAGTGAT
AAGCTGAACGTTGAAGTTGACCTTGTTGTGGATGAAAAGATCAGCTTGCGGGATAGTCATGACGTTGGTGAGAGT
TTGCAGTATATCATCGAGAGTGTGCCTACTGTCGACCGTGCCTTTGTGCATTTGGACTATGATGAATGGAACCTG
CCCAGCCATATGAACCAGATGGACCGGTAA
Transcript >Pro_DTO377G3_2|g6575.t1
ATGTCTTCCCAAACATTTCTTCCGATTTTCTCCCCTCCATCATCGCCTTCGCCCGTTCTACGTCCCCGACGTCCA
AGCCTAGAACCGGAGCGTGAAATTCTTTCCACCAGAGGCCAACACATATTGAACCTTTTCCCTTCTCGTACATCG
AGCCTTGCCTTGAACGATCTCGATGACGATACACCTGAAAGGCGACTTATTCTCAGACGCGGATCGTTGTTGATT
GGACACAGTAATCCTCGATATGAGTGGAAACGCTACTACAAATCACCCGAGTCATTAAAGAATCTTCCAAAGGAA
ATTCGGAAATACCATGAACGAAACAATGGACTGATCTCCCAATATCTCTATATTGACCGACTACTGGATTCTTCG
CTACCCCATAACCTGATCGAAGACTACAATGGATGCAATCACCATTCTTCGGGAAACAGAATTCTTCAGCCGTCT
GCGTTAGAGGATAACCAGACCGAGGCACCAGAACCCAATCCCAAGATCGGAAGGGTCAAACGCACCCCGCATAAT
CTTTATCGGATCCCCGATGAGACGACACCCTTGGTTCATTCTTCCGACGCAGAAGACAGCCCATTGGAGCCATTC
CCTGACCTCGAATCGCATGGTGGAATGTCCCTAGATGACGAGGAGCGCGTCATCAACCTGGCCATTCGCCTCAAT
TTTGTCGCCAACGTTGCTCTCCTAGCTTCAAAGATCGCTATCATGGCAATGACTAACTCCATGTCTATGCTCGCA
GGTCTAGTTGATGGGGTTTTGGACTTTCTTAGCACAGTGATTGTCTGGGTGACCACCATTATGATCCGCCGACAG
GATCGCAACCGGTATCCCATCAGCCGACGCCGGTTAGAGCCTGTCAGTGTGTTGATCTTCTCGGTGATCATGGTG
ACTTCCTTTTTTCAAGTAGCGCTGTCTTCTATCAAACAATTGATTGGGGACGACCGCACGGTTGTTAAGCTATCC
ATCCCATCAATCTCGCTGATGGGCGGTACAGTTTTGGTTAAGCTCCTCTGCTGGATCTGGTGCCGATTGATTCCT
AGCCCAAGCGTCCAGGTCCTGGCCCAGGATGCCATGACTGACGTTGTCTTTAACACGTTCAGCATCATCTTCCCA
CTGGTTGGTACTGCTGCAAATCTCTGGTACTTAGATCCCTTGGGTGGTCTATTCCTCTCCTTCTACATCATGTGG
AACTGGGGTCAGACCGCTGCGGAATACATCCAGCGCCTGACGGGTGCGGCTGCCTCTCCCGACGATCATAGTGTT
TTGCTGTATATGACCATGCGGTTCTCCCGGGTGATTCATAAAATTCAGGACTTGAAAGCCTACTACGCGAGTGAT
AAGCTGAACGTTGAAGTTGACCTTGTTGTGGATGAAAAGATCAGCTTGCGGGATAGTCATGACGTTGGTGAGAGT
TTGCAGTATATCATCGAGAGTGTGCCTACTGTCGACCGTGCCTTTGTGCATTTGGACTATGATGAATGGAACCTG
CCCAGCCATATGAACCAGATGGACCGGTAA
Gene >Pro_DTO377G3_2|g6575.t1
ATGTCTTCCCAAACATTTCTTCCGATTTTCTCCCCTCCATCATCGCCTTCGCCCGTTCTACGTCCCCGACGTCCA
AGCCTAGAACCGGAGCGTGAAATTCTTTCCACCAGAGGCCAACACATATTGAACCTTTTCCCTTCTCGTACATCG
AGCCTTGCCTTGAACGATCTCGATGACGATACACCTGAAAGGCGACTTATTCTCAGACGCGGATCGTTGTTGATT
GGACACAGTAATCCTCGATATGAGTGGTACTATCTCTCTCCTTCTTGATGCAATTACGGTCCTAACCGGCGCCGC
AGGAAACGCTACTACAAATCACCCGAGTCATTAAAGAATCTTCCAAAGGAAATGTCGGCTTGCCCCTCACATCAG
TAAACTAGGCACTGACTCCCGGAATAGTCGGAAATACCATGAACGAAACAATGGACTGATCTCCCAATATCTCTA
TATTGACCGACTACTGGATTCTTCGCTACCCCATAACCTGATCGAAGACTACAATGGATGCAATCACCATTCTTC
GGGAAACAGAATTCTTCAGCCGTCTGCGTTAGAGGATAACCAGACCGAGGCACCAGAACCCAATCCCAAGATCGG
AAGGGTCAAACGCACCCCGCATAATCTTTATCGGATCCCCGATGAGACGACACCCTTGGTTCATTCTTCCGACGC
AGAAGACAGCCCATTGGAGCCATTCCCTGACCTCGAATCGCATGGTGGAATGTCCCTAGATGACGAGGAGCGCGT
CATCAACCTGGCCATTCGCCTCAATTTTGTCGCCAACGTTGCTCTCCTAGCTTCAAAGATCGCTATCATGGCAAT
GACTAACTCCATGTCTATGCTCGCAGGTCTAGTTGATGGGGTTTTGGACTTTCTTAGCACAGTGATTGTCTGGGT
GACCACCATTATGATCCGCCGACAGGATCGCAACCGGTATCCCATCAGCCGACGCCGGTTAGAGCCTGTCAGTGT
GTTGATCTTCTCGGTGATCATGGTGACTTCCTTTTTTCAAGTAGCGCTGTCTTCTATCAAACAATTGATTGGGGA
CGACCGCACGGTTGTTAAGCTATCCATCCCATCAATCTCGCTGATGGGCGGTACAGTTTTGGTTAAGCTCCTCTG
CTGGATCTGGTGCCGATTGATTCCTAGCCCAAGCGTCCAGGTCCTGGCCCAGGATGCCATGACTGACGTTGTCTT
TAACACGTTCAGCATCATCTTCCCACTGGGTCAGTCTTATTCCTGTTCCCTACATAGAGTACCAACTAACAGCCA
CCGATCGTAGTTGGTACTGCTGCAAATCTCTGGTACTTAGATCCCTTGGGTGGTCTATTCCTCTCCTTCTACATC
ATGTGGAACTGGGGTCAGACCGCTGCGGAATACATCCAGCGCCTGACGGGTGCGGCTGCCTCTCCCGACGATCAT
AGTGTTTTGCTGTATATGACCATGCGGTTCTCCCGGGTGATTCATAAAATTCAGGACTTGAAAGCCTACTACGCG
AGTGATAAGCTGAACGTTGAAGTTGACCTTGTTGTGGATGAAAAGATCAGCTTGCGGGATAGTCATGACGTTGGT
GAGAGTTTGCAGTATATCATCGAGAGTGTGCCTACTGTCGACCGTGCCTTTGTGCATTTGGACTATGATGAATGG
AACCTGCCCAGCCATATGAACCAGATGGACCGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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