Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6561.t1
Gene name
Locationscaffold_17:521268..522680
Strand-
Gene length (bp)1412
Transcript length (bp)1182
Coding sequence length (bp)1182
Protein length (aa) 394

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08542 Rep_fac_C Replication factor C C-terminal domain 1.4E-16 290 375
PF00004 AAA ATPase family associated with various cellular activities (AAA) 4.7E-16 77 207
PF13177 DNA_pol3_delta2 DNA polymerase III, delta subunit 3.3E-11 58 209
PF03215 Rad17 Rad17 P-loop domain 5.3E-08 38 102
PF07728 AAA_5 AAA domain (dynein-related subfamily) 3.8E-05 76 176

GO

GO Term Description Terminal node
GO:0016887 ATPase activity Yes
GO:0005524 ATP binding Yes
GO:0097367 carbohydrate derivative binding No
GO:1901363 heterocyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:0097159 organic cyclic compound binding No
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides No
GO:0016462 pyrophosphatase activity No
GO:0032553 ribonucleotide binding No
GO:0003824 catalytic activity No
GO:0032559 adenyl ribonucleotide binding No
GO:0043168 anion binding No
GO:0017111 nucleoside-triphosphatase activity No
GO:1901265 nucleoside phosphate binding No
GO:0017076 purine nucleotide binding No
GO:0030554 adenyl nucleotide binding No
GO:0016787 hydrolase activity No
GO:0008144 drug binding No
GO:0000166 nucleotide binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0005488 binding No
GO:0016817 hydrolase activity, acting on acid anhydrides No
GO:0036094 small molecule binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 36 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6561.t1
MSDYEDEMDVDAPKDVQFSSDNASGKKRNVADLPVEAQDNLPWVEKYRPSSLDDVSGHQDILATINRFVETNRLP
HLLLYGPPGTGKTSTILALARRIYGTKNMRQMVLELNASDDRGIEVVREQIKTFASTKQIFTMAPQGTPGSPLAG
FKLIILDEADAMTSTAQMALRRIMERYTANTRFCVIANYTHKLSPALLSRCTRFRFSPLKEADIRSLVDKVIENE
GVRIQPDAVDSLVTLSKGDMRRALNVLQACFASSIPLPMRDAPKAPRPEPEIVTNATIYDCIAAPHPSDIQEIMS
TILSTSDVTSCLNTVQTLKSTKGLALADILSALADQLQQLEVPAQTRITWLEGLAEIEWRLAGGGSEAIQTGGLV
GVVRNGCELMGAKGVTTA*
Coding >Pro_DTO377G3_2|g6561.t1
ATGTCGGATTACGAGGATGAAATGGACGTGGATGCGCCCAAGGACGTGCAATTTAGCTCCGACAACGCCAGTGGA
AAAAAGAGGAATGTCGCTGATCTGCCAGTCGAAGCTCAAGATAATTTGCCATGGGTCGAGAAATACCGACCAAGC
AGCCTGGATGATGTCTCTGGCCATCAAGACATCCTCGCGACTATCAATCGGTTCGTGGAGACAAATCGATTGCCT
CATCTCCTCCTCTATGGACCACCAGGAACCGGAAAGACCTCTACCATCCTGGCCCTGGCGCGGCGAATCTACGGC
ACCAAGAACATGCGACAGATGGTTTTGGAGCTAAATGCAAGTGATGATCGTGGTATTGAAGTTGTCCGAGAACAA
ATCAAGACCTTTGCAAGCACCAAACAGATCTTCACCATGGCCCCCCAAGGCACTCCCGGCTCCCCTCTGGCGGGT
TTTAAGCTTATCATTCTGGACGAAGCCGATGCGATGACGTCGACCGCACAAATGGCTCTCCGCCGTATTATGGAG
CGCTACACGGCCAATACCCGATTCTGCGTCATTGCCAACTACACACATAAGCTGTCCCCGGCACTCCTGTCGCGG
TGTACTCGATTCCGGTTCAGTCCACTGAAGGAAGCCGATATTCGGAGTTTGGTCGACAAAGTGATTGAGAACGAG
GGTGTCAGGATACAGCCCGATGCGGTCGACAGTCTAGTGACCCTGAGCAAAGGTGATATGCGACGAGCCCTAAAC
GTGCTTCAGGCATGCTTTGCCAGCAGTATCCCGCTGCCGATGAGAGACGCCCCGAAAGCCCCTCGTCCGGAGCCC
GAAATTGTCACCAATGCGACGATTTATGACTGCATTGCCGCGCCGCACCCGTCCGATATCCAAGAAATCATGTCT
ACCATCCTCTCCACTAGCGATGTCACTTCCTGTCTGAACACCGTGCAAACCCTAAAGTCCACCAAGGGTCTGGCT
TTGGCCGACATCCTTTCCGCGCTAGCAGATCAACTCCAGCAGCTCGAAGTTCCCGCCCAAACACGTATCACGTGG
CTTGAAGGACTGGCCGAGATTGAATGGCGACTTGCAGGGGGTGGTTCTGAAGCCATTCAGACTGGAGGGCTCGTC
GGTGTAGTTCGAAATGGATGTGAATTAATGGGTGCCAAGGGTGTCACGACGGCATAA
Transcript >Pro_DTO377G3_2|g6561.t1
ATGTCGGATTACGAGGATGAAATGGACGTGGATGCGCCCAAGGACGTGCAATTTAGCTCCGACAACGCCAGTGGA
AAAAAGAGGAATGTCGCTGATCTGCCAGTCGAAGCTCAAGATAATTTGCCATGGGTCGAGAAATACCGACCAAGC
AGCCTGGATGATGTCTCTGGCCATCAAGACATCCTCGCGACTATCAATCGGTTCGTGGAGACAAATCGATTGCCT
CATCTCCTCCTCTATGGACCACCAGGAACCGGAAAGACCTCTACCATCCTGGCCCTGGCGCGGCGAATCTACGGC
ACCAAGAACATGCGACAGATGGTTTTGGAGCTAAATGCAAGTGATGATCGTGGTATTGAAGTTGTCCGAGAACAA
ATCAAGACCTTTGCAAGCACCAAACAGATCTTCACCATGGCCCCCCAAGGCACTCCCGGCTCCCCTCTGGCGGGT
TTTAAGCTTATCATTCTGGACGAAGCCGATGCGATGACGTCGACCGCACAAATGGCTCTCCGCCGTATTATGGAG
CGCTACACGGCCAATACCCGATTCTGCGTCATTGCCAACTACACACATAAGCTGTCCCCGGCACTCCTGTCGCGG
TGTACTCGATTCCGGTTCAGTCCACTGAAGGAAGCCGATATTCGGAGTTTGGTCGACAAAGTGATTGAGAACGAG
GGTGTCAGGATACAGCCCGATGCGGTCGACAGTCTAGTGACCCTGAGCAAAGGTGATATGCGACGAGCCCTAAAC
GTGCTTCAGGCATGCTTTGCCAGCAGTATCCCGCTGCCGATGAGAGACGCCCCGAAAGCCCCTCGTCCGGAGCCC
GAAATTGTCACCAATGCGACGATTTATGACTGCATTGCCGCGCCGCACCCGTCCGATATCCAAGAAATCATGTCT
ACCATCCTCTCCACTAGCGATGTCACTTCCTGTCTGAACACCGTGCAAACCCTAAAGTCCACCAAGGGTCTGGCT
TTGGCCGACATCCTTTCCGCGCTAGCAGATCAACTCCAGCAGCTCGAAGTTCCCGCCCAAACACGTATCACGTGG
CTTGAAGGACTGGCCGAGATTGAATGGCGACTTGCAGGGGGTGGTTCTGAAGCCATTCAGACTGGAGGGCTCGTC
GGTGTAGTTCGAAATGGATGTGAATTAATGGGTGCCAAGGGTGTCACGACGGCATAA
Gene >Pro_DTO377G3_2|g6561.t1
ATGTCGGATTACGAGGATGAAATGGACGTGGATGCGCCCAAGGACGTGCAATTTAGCTCCGACAACGCCAGTGGA
AAAAAGAGGAATGTCGCTGATCTGCCAGTCGAAGCTCAAGATAATTTGCCATGGTGAGTTTTAGGAATTGCTTCG
ATTGTGTTATATCACTAATACCCTTCCCAGGGTCGAGAAATACCGACCAAGCAGCCTGGATGATGTCTCTGGCCA
TCAAGACATCCTCGCGACTATCAATCGGTTCGTGGAGACAAATGTAACGAATGCCTACGATGCCGGATGTACGAT
AGCCTCTGATTAACATTCTCGTCCAGCGATTGCCTCATCTCCTCCTCTATGGACCACCAGGAACCGGAAAGACCT
CTACCATCCTGGCCCTGGCGCGGCGAATCTACGGCACCAAGAACATGCGACAGATGGTTTTGGAGCTAAATGCAA
GTGATGATCGTGGTATTGAAGTTGTCCGAGAACAAATCAAGACCTTTGCAAGTTCGTGCTCTAGGAGTCTCGAGT
TATGAACTACAAGCTTACCGTGAATACGAACAGGCACCAAACAGATCTTCACCATGGCCCCCCAAGGCACTCCCG
GCTCCCCTCTGGCGGGTTTTAAGCTTATCATTCTGGACGAAGCCGATGCGATGACGTCGACCGCACAAATGGCTC
TCCGCCGTATTATGGAGCGCTACACGGCCAATACCCGATTCTGCGTCATTGCCAACTACACACATAAGCTGTCCC
CGGCACTCCTGTCGCGGTGTACTCGATTCCGGTTCAGTCCACTGAAGGAAGCCGATATTCGGAGTTTGGTCGACA
AAGTGATTGAGAACGAGGGTGTCAGGATACAGCCCGATGCGGTCGACAGTCTAGTGACCCTGAGCAAAGGTGATA
TGCGACGAGCCCTAAACGTGCTTCAGGCATGCTTTGCCAGCAGTAAGCTCATGTCCTTTCTCTCCTTGGTCACAT
TCATCCTAATTGACTAATGTTATCTTTTAGGTATCCCGCTGCCGATGAGAGACGCCCCGAAAGCCCCTCGTCCGG
AGCCCGAAATTGTCACCAATGCGACGATTTATGACTGCATTGCCGCGCCGCACCCGTCCGATATCCAAGAAATCA
TGTCTACCATCCTCTCCACTAGCGATGTCACTTCCTGTCTGAACACCGTGCAAACCCTAAAGTCCACCAAGGGTC
TGGCTTTGGCCGACATCCTTTCCGCGCTAGCAGATCAACTCCAGCAGCTCGAAGTTCCCGCCCAAACACGTATCA
CGTGGCTTGAAGGACTGGCCGAGATTGAATGGCGACTTGCAGGGGGTGGTTCTGAAGCCATTCAGACTGGAGGGC
TCGTCGGTGTAGTTCGAAATGGATGTGAATTAATGGGTGCCAAGGGTGTCACGACGGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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