Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6558.t1
Gene name
Locationscaffold_17:515910..517548
Strand-
Gene length (bp)1638
Transcript length (bp)1638
Coding sequence length (bp)1638
Protein length (aa) 546

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00160 Pro_isomerase Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1.3E-39 17 184

GO

GO Term Description Terminal node
GO:0000413 protein peptidyl-prolyl isomerization Yes
GO:0003755 peptidyl-prolyl cis-trans isomerase activity Yes
GO:0003674 molecular_function No
GO:0043170 macromolecule metabolic process No
GO:0140096 catalytic activity, acting on a protein No
GO:0019538 protein metabolic process No
GO:0008150 biological_process No
GO:0036211 protein modification process No
GO:0071704 organic substance metabolic process No
GO:0008152 metabolic process No
GO:0018208 peptidyl-proline modification No
GO:0003824 catalytic activity No
GO:0043412 macromolecule modification No
GO:0006807 nitrogen compound metabolic process No
GO:0016853 isomerase activity No
GO:0018193 peptidyl-amino acid modification No
GO:0016859 cis-trans isomerase activity No
GO:1901564 organonitrogen compound metabolic process No
GO:0044238 primary metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 38 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 26.03 14.47 37.59
5d_25C Five days - 25 degrees Celsius 30.58 17.43 43.73
7d_25C Seven days - 25 degrees Celsius 26.11 14.42 37.80
10d_25C Ten days - 25 degrees Celsius 25.32 13.94 36.71
7d_15C Seven days - 15 degrees Celsius 36.49 21.24 51.75
7d_30C Seven days - 30 degrees Celsius 24.75 13.57 35.93

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.582600 no
3d_25C 7d_25C 0.994155 no
3d_25C 7d_15C 0.159868 no
3d_25C 7d_30C 0.890408 no
3d_25C 10d_25C 0.943837 no
5d_25C 7d_25C 0.597597 no
5d_25C 7d_15C 0.530061 no
5d_25C 7d_30C 0.447720 no
5d_25C 10d_25C 0.514176 no
7d_25C 7d_15C 0.177586 no
7d_25C 7d_30C 0.886678 no
7d_25C 10d_25C 0.938927 no
7d_15C 7d_30C 0.105124 no
7d_15C 10d_25C 0.133183 no
7d_30C 10d_25C 0.956705 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6558.t1
MSTQYASEPNPTASATLNTTVGPIQLALFANQAPLTCKNFLQHCKDNYYAGTIFHRVAPDFVIQGGDPTGTGSGG
TSIYEYPEFEFDPEARDPHERVVLRDELHSRLRFNRRGLLGMAKSEDGTYGSQFFITLANTEREMNGQCTIFGRL
EGDSIYNVLKIADAERIAGTERPVYPIKVTSCEVGELGPLEGKLKDRKTVSTAGKADKGAPKKKKKGPKGGKTLL
SFGDDGDEEIPMRPAKPKFNTNLVVDAPGAKPDASSPKPRADAPSQPRKRPRSPSLDRSPSTERKRRPTTPDPET
QLPLPDPESPTRSPTPDAPPAKESKLSRTNAQIAALMASMRRDVDLVPKDTGRKKSALEAMIPETSIRGRKRPPP
GTANGSSRNGTGPSSAAEREALQLFNAFKAKLEGAKSKPTATPSHSKSHIDKDTENQKKDEEDEEAQLCDLHFIA
NCQSCQAWDDPEAEADDPEQQDGGWLSHELRFGKDTLGKDLNWKREHGGEADSLMVIDPREREKEVVGRKRGFQR
DRERERKRERVGDLEWDKGR*
Coding >Pro_DTO377G3_2|g6558.t1
ATGTCTACCCAATACGCCAGCGAGCCCAATCCCACTGCGTCTGCGACGCTCAACACAACGGTTGGCCCCATCCAG
CTCGCGCTCTTCGCAAACCAGGCCCCTCTCACCTGCAAAAACTTCCTTCAGCACTGCAAGGACAACTACTATGCC
GGCACAATCTTTCACCGGGTGGCCCCCGATTTTGTGATCCAGGGCGGTGATCCCACCGGCACTGGCTCCGGCGGA
ACTTCTATCTATGAATACCCGGAATTCGAGTTTGATCCTGAAGCTCGGGACCCGCATGAGCGCGTCGTTCTACGC
GATGAGCTGCACAGTCGGTTACGTTTCAACCGACGTGGCTTGCTAGGAATGGCCAAGAGCGAGGACGGGACATAC
GGCAGTCAATTTTTCATCACGCTAGCGAACACGGAGCGTGAGATGAATGGGCAATGTACAATTTTTGGGAGACTG
GAAGGGGACAGTATCTACAATGTGTTGAAGATTGCAGACGCCGAGCGCATTGCGGGCACCGAGCGTCCTGTTTAT
CCGATTAAGGTGACATCCTGCGAGGTTGGAGAACTGGGGCCTTTGGAGGGCAAATTAAAGGACAGAAAGACAGTC
TCAACTGCCGGGAAGGCGGATAAAGGTGCACCCAAGAAAAAGAAGAAGGGACCCAAAGGCGGGAAGACGCTTCTG
AGCTTTGGAGACGATGGAGACGAAGAAATACCCATGCGCCCAGCGAAGCCGAAATTCAACACCAATTTGGTCGTA
GATGCGCCAGGTGCAAAGCCCGACGCATCAAGCCCCAAACCCCGAGCAGATGCTCCATCACAGCCGCGCAAACGG
CCCCGGTCGCCATCTCTAGATAGATCGCCATCTACCGAGCGTAAAAGGCGCCCAACGACACCAGATCCAGAAACA
CAACTCCCCCTGCCTGACCCTGAGTCGCCTACTCGGTCTCCGACCCCGGACGCCCCACCCGCAAAGGAGTCCAAG
CTGTCGCGGACAAACGCTCAGATTGCCGCTCTGATGGCGTCAATGCGCCGCGACGTTGACCTGGTTCCTAAGGAC
ACAGGCCGAAAGAAGTCTGCACTCGAAGCCATGATCCCTGAGACCTCCATCCGAGGACGGAAACGGCCACCTCCA
GGAACCGCAAATGGTTCCAGTCGTAACGGGACAGGACCTAGTAGCGCCGCTGAACGAGAAGCATTGCAGCTCTTT
AACGCCTTCAAAGCCAAGCTCGAAGGAGCCAAATCCAAACCAACTGCCACACCATCACATAGCAAAAGTCACATC
GACAAAGACACCGAAAATCAAAAGAAAGACGAAGAAGACGAAGAGGCCCAACTCTGCGACCTGCACTTCATTGCA
AACTGCCAATCCTGCCAGGCATGGGATGACCCCGAGGCAGAGGCGGACGACCCCGAACAGCAAGACGGCGGTTGG
CTCTCGCATGAACTCCGGTTTGGGAAAGATACCCTAGGCAAAGACTTGAACTGGAAGCGCGAGCATGGAGGTGAG
GCAGATTCACTTATGGTGATTGATCCTCGCGAGCGCGAGAAGGAAGTGGTTGGGCGAAAGCGGGGATTCCAACGC
GACAGAGAGCGCGAGCGTAAACGAGAGCGAGTCGGTGATTTGGAATGGGATAAGGGGCGCTGA
Transcript >Pro_DTO377G3_2|g6558.t1
ATGTCTACCCAATACGCCAGCGAGCCCAATCCCACTGCGTCTGCGACGCTCAACACAACGGTTGGCCCCATCCAG
CTCGCGCTCTTCGCAAACCAGGCCCCTCTCACCTGCAAAAACTTCCTTCAGCACTGCAAGGACAACTACTATGCC
GGCACAATCTTTCACCGGGTGGCCCCCGATTTTGTGATCCAGGGCGGTGATCCCACCGGCACTGGCTCCGGCGGA
ACTTCTATCTATGAATACCCGGAATTCGAGTTTGATCCTGAAGCTCGGGACCCGCATGAGCGCGTCGTTCTACGC
GATGAGCTGCACAGTCGGTTACGTTTCAACCGACGTGGCTTGCTAGGAATGGCCAAGAGCGAGGACGGGACATAC
GGCAGTCAATTTTTCATCACGCTAGCGAACACGGAGCGTGAGATGAATGGGCAATGTACAATTTTTGGGAGACTG
GAAGGGGACAGTATCTACAATGTGTTGAAGATTGCAGACGCCGAGCGCATTGCGGGCACCGAGCGTCCTGTTTAT
CCGATTAAGGTGACATCCTGCGAGGTTGGAGAACTGGGGCCTTTGGAGGGCAAATTAAAGGACAGAAAGACAGTC
TCAACTGCCGGGAAGGCGGATAAAGGTGCACCCAAGAAAAAGAAGAAGGGACCCAAAGGCGGGAAGACGCTTCTG
AGCTTTGGAGACGATGGAGACGAAGAAATACCCATGCGCCCAGCGAAGCCGAAATTCAACACCAATTTGGTCGTA
GATGCGCCAGGTGCAAAGCCCGACGCATCAAGCCCCAAACCCCGAGCAGATGCTCCATCACAGCCGCGCAAACGG
CCCCGGTCGCCATCTCTAGATAGATCGCCATCTACCGAGCGTAAAAGGCGCCCAACGACACCAGATCCAGAAACA
CAACTCCCCCTGCCTGACCCTGAGTCGCCTACTCGGTCTCCGACCCCGGACGCCCCACCCGCAAAGGAGTCCAAG
CTGTCGCGGACAAACGCTCAGATTGCCGCTCTGATGGCGTCAATGCGCCGCGACGTTGACCTGGTTCCTAAGGAC
ACAGGCCGAAAGAAGTCTGCACTCGAAGCCATGATCCCTGAGACCTCCATCCGAGGACGGAAACGGCCACCTCCA
GGAACCGCAAATGGTTCCAGTCGTAACGGGACAGGACCTAGTAGCGCCGCTGAACGAGAAGCATTGCAGCTCTTT
AACGCCTTCAAAGCCAAGCTCGAAGGAGCCAAATCCAAACCAACTGCCACACCATCACATAGCAAAAGTCACATC
GACAAAGACACCGAAAATCAAAAGAAAGACGAAGAAGACGAAGAGGCCCAACTCTGCGACCTGCACTTCATTGCA
AACTGCCAATCCTGCCAGGCATGGGATGACCCCGAGGCAGAGGCGGACGACCCCGAACAGCAAGACGGCGGTTGG
CTCTCGCATGAACTCCGGTTTGGGAAAGATACCCTAGGCAAAGACTTGAACTGGAAGCGCGAGCATGGAGGTGAG
GCAGATTCACTTATGGTGATTGATCCTCGCGAGCGCGAGAAGGAAGTGGTTGGGCGAAAGCGGGGATTCCAACGC
GACAGAGAGCGCGAGCGTAAACGAGAGCGAGTCGGTGATTTGGAATGGGATAAGGGGCGCTGA
Gene >Pro_DTO377G3_2|g6558.t1
ATGTCTACCCAATACGCCAGCGAGCCCAATCCCACTGCGTCTGCGACGCTCAACACAACGGTTGGCCCCATCCAG
CTCGCGCTCTTCGCAAACCAGGCCCCTCTCACCTGCAAAAACTTCCTTCAGCACTGCAAGGACAACTACTATGCC
GGCACAATCTTTCACCGGGTGGCCCCCGATTTTGTGATCCAGGGCGGTGATCCCACCGGCACTGGCTCCGGCGGA
ACTTCTATCTATGAATACCCGGAATTCGAGTTTGATCCTGAAGCTCGGGACCCGCATGAGCGCGTCGTTCTACGC
GATGAGCTGCACAGTCGGTTACGTTTCAACCGACGTGGCTTGCTAGGAATGGCCAAGAGCGAGGACGGGACATAC
GGCAGTCAATTTTTCATCACGCTAGCGAACACGGAGCGTGAGATGAATGGGCAATGTACAATTTTTGGGAGACTG
GAAGGGGACAGTATCTACAATGTGTTGAAGATTGCAGACGCCGAGCGCATTGCGGGCACCGAGCGTCCTGTTTAT
CCGATTAAGGTGACATCCTGCGAGGTTGGAGAACTGGGGCCTTTGGAGGGCAAATTAAAGGACAGAAAGACAGTC
TCAACTGCCGGGAAGGCGGATAAAGGTGCACCCAAGAAAAAGAAGAAGGGACCCAAAGGCGGGAAGACGCTTCTG
AGCTTTGGAGACGATGGAGACGAAGAAATACCCATGCGCCCAGCGAAGCCGAAATTCAACACCAATTTGGTCGTA
GATGCGCCAGGTGCAAAGCCCGACGCATCAAGCCCCAAACCCCGAGCAGATGCTCCATCACAGCCGCGCAAACGG
CCCCGGTCGCCATCTCTAGATAGATCGCCATCTACCGAGCGTAAAAGGCGCCCAACGACACCAGATCCAGAAACA
CAACTCCCCCTGCCTGACCCTGAGTCGCCTACTCGGTCTCCGACCCCGGACGCCCCACCCGCAAAGGAGTCCAAG
CTGTCGCGGACAAACGCTCAGATTGCCGCTCTGATGGCGTCAATGCGCCGCGACGTTGACCTGGTTCCTAAGGAC
ACAGGCCGAAAGAAGTCTGCACTCGAAGCCATGATCCCTGAGACCTCCATCCGAGGACGGAAACGGCCACCTCCA
GGAACCGCAAATGGTTCCAGTCGTAACGGGACAGGACCTAGTAGCGCCGCTGAACGAGAAGCATTGCAGCTCTTT
AACGCCTTCAAAGCCAAGCTCGAAGGAGCCAAATCCAAACCAACTGCCACACCATCACATAGCAAAAGTCACATC
GACAAAGACACCGAAAATCAAAAGAAAGACGAAGAAGACGAAGAGGCCCAACTCTGCGACCTGCACTTCATTGCA
AACTGCCAATCCTGCCAGGCATGGGATGACCCCGAGGCAGAGGCGGACGACCCCGAACAGCAAGACGGCGGTTGG
CTCTCGCATGAACTCCGGTTTGGGAAAGATACCCTAGGCAAAGACTTGAACTGGAAGCGCGAGCATGGAGGTGAG
GCAGATTCACTTATGGTGATTGATCCTCGCGAGCGCGAGAAGGAAGTGGTTGGGCGAAAGCGGGGATTCCAACGC
GACAGAGAGCGCGAGCGTAAACGAGAGCGAGTCGGTGATTTGGAATGGGATAAGGGGCGCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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