Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g655.t1
Gene name
Locationscaffold_01:1682872..1684469
Strand+
Gene length (bp)1597
Transcript length (bp)1482
Coding sequence length (bp)1482
Protein length (aa) 494

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12265 CAF1C_H4-bd Histone-binding protein RBBP4 or subunit C of CAF1 complex 7.1E-16 86 154
PF00400 WD40 WD domain, G-beta repeat 1.3E-06 297 332
PF00400 WD40 WD domain, G-beta repeat 3.2E-04 396 433

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g655.t1
MSKRSAEADEHTAALKAGERPIADAPMDEAGEFEDEYEDEFESEDEILEAGVDGRPDAEREEEEKEAMDVDKETF
IPGRTKLAPGETLSPDPSTYDMLHTLSTPWPCLSFDIVRDSLGDNRKTYPATVYAVTGTQAEGSKSKENELMVLK
MSGLSKMERGGEDSESDSDDDDMGEPILESKSIPLGSTTNRIRTHQTPSQSGDYSKPPQTLTATWLENSQVVIHD
VTAHLSSFDVPGTILPPSASKPLSTLRMHKTEGYALDWSPLQPLGKLLTGDNNGLIYATTRTEGGGWVTDTRPFT
GHASSIEELQWSPNERNVFASASSDGSVKVWDVRSKSRKPAVDVQVSKTDVNVMSWSNQAAHLLATGADDGQWAV
WDLRHWKPNAAAPSAQITSTPVASFDFHKEPITTIEWHPSDDSVVAVGSADNTVTLWDLAVELDDEESRQANMVD
IPSQLLFVHYMESVKELHWQAQMPGTLMATGSSGFSVFKTISV*
Coding >Pro_DTO377G3_2|g655.t1
ATGTCCAAGAGAAGCGCTGAAGCGGACGAGCACACTGCCGCCCTCAAGGCTGGCGAGCGGCCAATTGCAGATGCC
CCAATGGACGAGGCGGGGGAGTTCGAAGACGAGTACGAGGATGAATTTGAGAGTGAAGATGAGATTCTAGAGGCC
GGAGTGGATGGTCGCCCAGATGCTGAGCGCGAGGAGGAAGAGAAGGAAGCTATGGATGTCGACAAGGAGACTTTC
ATTCCTGGGCGAACAAAATTGGCTCCCGGAGAGACACTATCGCCCGATCCCTCCACTTACGATATGCTCCACACA
CTCAGCACACCATGGCCATGCCTTTCCTTCGATATTGTGCGCGATTCACTCGGTGATAACCGCAAGACCTACCCC
GCTACTGTCTACGCTGTTACTGGTACACAAGCTGAGGGCTCGAAATCCAAGGAAAATGAACTCATGGTGCTCAAG
ATGAGCGGACTGAGCAAGATGGAGAGGGGAGGTGAGGATTCAGAAAGCGACTCGGACGACGACGACATGGGCGAG
CCCATTCTGGAGAGCAAGTCGATCCCGCTTGGCTCAACGACGAACCGCATTCGTACCCACCAGACCCCCTCCCAG
TCCGGTGATTACTCCAAGCCCCCGCAGACCCTTACCGCGACCTGGCTCGAGAACTCGCAAGTCGTCATTCACGAT
GTTACCGCCCACCTTTCTAGCTTCGATGTTCCCGGCACTATTCTTCCTCCTTCGGCATCTAAGCCTCTTTCCACC
CTGCGCATGCACAAGACTGAAGGATATGCATTGGATTGGTCTCCGCTCCAGCCTCTTGGAAAGCTGTTGACCGGT
GACAATAACGGATTGATCTATGCCACCACTCGCACAGAAGGTGGCGGCTGGGTTACCGACACCCGGCCGTTCACA
GGCCATGCTTCCTCAATTGAGGAATTGCAGTGGTCTCCTAACGAGCGCAACGTGTTTGCATCCGCTAGCAGTGAC
GGTAGCGTAAAGGTTTGGGATGTGCGATCCAAGTCGCGCAAGCCCGCCGTGGACGTCCAGGTCTCCAAAACCGAC
GTGAACGTTATGAGCTGGTCTAACCAGGCCGCTCACCTTTTGGCCACTGGAGCCGACGATGGACAGTGGGCAGTC
TGGGATTTGCGTCACTGGAAGCCCAATGCCGCGGCGCCTTCTGCCCAGATCACCTCTACCCCCGTTGCATCATTC
GACTTCCACAAGGAGCCGATCACCACTATCGAATGGCACCCCTCAGACGACAGTGTGGTGGCCGTTGGCTCGGCA
GACAACACTGTCACACTTTGGGATCTTGCTGTCGAGCTGGACGACGAAGAAAGCCGCCAGGCCAACATGGTGGAC
ATTCCTTCGCAACTGCTGTTCGTGCACTATATGGAGTCTGTCAAGGAACTCCACTGGCAGGCACAGATGCCCGGT
ACGCTCATGGCGACCGGCAGCAGTGGATTCAGTGTTTTCAAGACGATCAGTGTCTAG
Transcript >Pro_DTO377G3_2|g655.t1
ATGTCCAAGAGAAGCGCTGAAGCGGACGAGCACACTGCCGCCCTCAAGGCTGGCGAGCGGCCAATTGCAGATGCC
CCAATGGACGAGGCGGGGGAGTTCGAAGACGAGTACGAGGATGAATTTGAGAGTGAAGATGAGATTCTAGAGGCC
GGAGTGGATGGTCGCCCAGATGCTGAGCGCGAGGAGGAAGAGAAGGAAGCTATGGATGTCGACAAGGAGACTTTC
ATTCCTGGGCGAACAAAATTGGCTCCCGGAGAGACACTATCGCCCGATCCCTCCACTTACGATATGCTCCACACA
CTCAGCACACCATGGCCATGCCTTTCCTTCGATATTGTGCGCGATTCACTCGGTGATAACCGCAAGACCTACCCC
GCTACTGTCTACGCTGTTACTGGTACACAAGCTGAGGGCTCGAAATCCAAGGAAAATGAACTCATGGTGCTCAAG
ATGAGCGGACTGAGCAAGATGGAGAGGGGAGGTGAGGATTCAGAAAGCGACTCGGACGACGACGACATGGGCGAG
CCCATTCTGGAGAGCAAGTCGATCCCGCTTGGCTCAACGACGAACCGCATTCGTACCCACCAGACCCCCTCCCAG
TCCGGTGATTACTCCAAGCCCCCGCAGACCCTTACCGCGACCTGGCTCGAGAACTCGCAAGTCGTCATTCACGAT
GTTACCGCCCACCTTTCTAGCTTCGATGTTCCCGGCACTATTCTTCCTCCTTCGGCATCTAAGCCTCTTTCCACC
CTGCGCATGCACAAGACTGAAGGATATGCATTGGATTGGTCTCCGCTCCAGCCTCTTGGAAAGCTGTTGACCGGT
GACAATAACGGATTGATCTATGCCACCACTCGCACAGAAGGTGGCGGCTGGGTTACCGACACCCGGCCGTTCACA
GGCCATGCTTCCTCAATTGAGGAATTGCAGTGGTCTCCTAACGAGCGCAACGTGTTTGCATCCGCTAGCAGTGAC
GGTAGCGTAAAGGTTTGGGATGTGCGATCCAAGTCGCGCAAGCCCGCCGTGGACGTCCAGGTCTCCAAAACCGAC
GTGAACGTTATGAGCTGGTCTAACCAGGCCGCTCACCTTTTGGCCACTGGAGCCGACGATGGACAGTGGGCAGTC
TGGGATTTGCGTCACTGGAAGCCCAATGCCGCGGCGCCTTCTGCCCAGATCACCTCTACCCCCGTTGCATCATTC
GACTTCCACAAGGAGCCGATCACCACTATCGAATGGCACCCCTCAGACGACAGTGTGGTGGCCGTTGGCTCGGCA
GACAACACTGTCACACTTTGGGATCTTGCTGTCGAGCTGGACGACGAAGAAAGCCGCCAGGCCAACATGGTGGAC
ATTCCTTCGCAACTGCTGTTCGTGCACTATATGGAGTCTGTCAAGGAACTCCACTGGCAGGCACAGATGCCCGGT
ACGCTCATGGCGACCGGCAGCAGTGGATTCAGTGTTTTCAAGACGATCAGTGTCTAG
Gene >Pro_DTO377G3_2|g655.t1
ATGTCCAAGAGAAGCGCTGAAGCGGACGAGCACACTGCCGCCCTCAAGGCTGGCGAGCGGCCAATTGCAGATGCC
CCAATGGACGAGGCGGGGGAGTTCGAAGACGAGTACGAGGATGAATTTGAGAGTGAAGATGAGATTCTAGAGGCC
GGAGTGGATGGTCGCCCAGATGCTGAGCGCGAGGAGGAAGAGAAGGGTGCGCATTCTTCAATCCTCAGCCTGTTC
AACTGAACTAACCTTGTTTAAATCTTATAGAAGCTATGGATGTCGACAAGGAGACTTTCATTCCTGGGCGAACAA
AATTGGCTCCCGGAGAGACACTATCGCCCGATCCCTCCACTTACGATATGCTCCACACACTCAGCACACCATGGC
CATGCCTTTCCTTCGATATTGTGCGCGATTCACTCGGTGATAACCGCAAGACCTACCCCGCTACTGTCTACGCTG
TTACTGGTACACAAGCTGAGGGCTCGAAATCCAAGGAAAATGAACTCATGGTGCTCAAGATGAGCGGACTGAGCA
AGATGGAGAGGGGAGGTGAGGATTCAGAAAGCGACTCGGACGACGACGACATGGGCGAGCCCATTCTGGAGAGCA
AGTCGATCCCGCTTGGCTCAACGACGAACCGCATTCGTACCCACCAGACCCCCTCCCAGTCCGGTGATTACTCCA
AGCCCCCGCAGACCCTTACCGCGACCTGGCTCGAGAACTCGCAAGTCGTCATTCACGATGTTACCGCCCACCTTT
CTAGCTTCGATGTTCCCGGCACTATTCTTCCTCCTTCGGCATCTAAGCCTCTTTCCACCCTGCGCATGCACAAGA
CTGAAGGATATGCATTGGATTGGTCTCCGCTCCAGCCTCTTGGAAAGCTGTTGACCGGTGACAATAACGGATTGA
TCTATGCCACCACTCGCACAGAAGGTGGCGGCTGGGTTACCGACACCCGGCCGTTCACAGGCCATGCTTCCTCAA
TTGAGGAATTGCAGTGGTCTCCTAACGAGCGCAACGTGTTTGCATCCGCTAGCAGTGACGGTAGCGTAAAGGTTT
GGGATGTGCGATCCAAGTCGCGCAAGCCCGCCGTGGACGTCCAGGTCTCCAAAACCGACGTGAACGTTATGAGCT
GGTCTAACCAGGCCGCTCACCTTTTGGCCACTGGAGCCGACGATGGACAGTGGGCAGTCTGGGATTTGCGTCACT
GGAAGCCCAATGCCGCGGCGCCTTCTGCCCAGATCACCTCTACCCCCGTTGCATCATTCGACTTCCACAAGGAGC
CGATCACCACTATCGAATGGCACCCCTCAGACGACAGTGTGGTGGCCGTTGGCTCGGCAGACAACACTGTCACAC
TTTGGGATCTTGCTGTCGAGCTGGACGACGAAGAAAGCCGCCAGGCCAACATGGTGGACATTCCTTCGCAACTGC
TGTTCGTGCACTATATGGAGTCTGTCAAGGAACTCCACTGGCAGGCACAGATGCCCGGTACGCTCATGGCGACCG
GCAGCAGTGGATTCAGGTATGTTATATTCGTTATCATGCGGTTGAGCCAAGCTAACCAGTTCCTTTTAATAGTGT
TTTCAAGACGATCAGTGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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