Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6542.t1
Gene name
Locationscaffold_17:477909..478977
Strand-
Gene length (bp)1068
Transcript length (bp)885
Coding sequence length (bp)885
Protein length (aa) 295

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01764 Lipase_3 Lipase (class 3) 1.5E-36 104 234
PF03893 Lipase3_N Lipase 3 N-terminal region 2.3E-07 9 78
PF06259 Abhydrolase_8 Alpha/beta hydrolase 1.9E-04 146 233

GO

GO Term Description Terminal node
GO:0006629 lipid metabolic process Yes
GO:0016042 lipid catabolic process Yes
GO:0008150 biological_process No
GO:0044238 primary metabolic process No
GO:1901575 organic substance catabolic process No
GO:0009056 catabolic process No
GO:0008152 metabolic process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6542.t1
MLLLGRLWSIAALAALTVAAPSRSVPRDVSADVLGQLTLFSQWAAASYCTNNSNSTGDGVSCEQGNCPLVESADT
TTLYEFDETSSYGDVAGFLAVDKTNKLLVVSFRGSRTLSNWIANINFGFTDASSICSGCEAHGGFLEAWEAVAAD
LTSKIKAAKATYSGYTLVVTGHSYGGALATLGGIVLRNGGYEPSVYTYGQPRVGNKALAQYITDQGSLWRVTHTD
DLVPKVPPATVGFSHASPEYWITSGDNTTVTSSDIDVIVGVGSKSGNAGTLNPDTAAHNWYLGHIDACK*
Coding >Pro_DTO377G3_2|g6542.t1
ATGCTTCTTCTTGGTCGTCTTTGGAGTATCGCTGCTCTTGCGGCGCTGACGGTTGCTGCTCCTTCTCGTTCTGTT
CCTCGAGATGTGTCGGCTGATGTGCTCGGTCAATTGACCCTGTTCTCGCAGTGGGCTGCAGCATCATACTGCACG
AACAATAGCAACTCCACCGGCGATGGGGTATCTTGCGAGCAAGGCAACTGCCCCTTGGTGGAGTCCGCTGACACA
ACTACTCTATACGAGTTTGACGAGACCTCCAGCTATGGTGATGTTGCCGGCTTCCTCGCGGTTGACAAGACAAAC
AAGCTACTTGTTGTCTCATTCCGAGGCAGTCGCACACTGAGTAACTGGATCGCGAACATCAACTTTGGCTTCACC
GATGCTAGTAGTATCTGCAGCGGTTGCGAAGCCCACGGCGGGTTCTTGGAAGCCTGGGAGGCTGTCGCAGCTGAT
CTGACATCCAAGATCAAGGCCGCAAAGGCAACATACTCGGGCTACACTCTTGTCGTGACAGGCCACAGCTATGGC
GGAGCCCTTGCCACGTTGGGAGGTATTGTGCTTCGAAATGGCGGATATGAACCAAGTGTGTATACTTATGGCCAG
CCACGGGTGGGTAACAAGGCTCTAGCTCAATATATCACAGACCAGGGCAGTCTCTGGCGAGTGACACATACAGAC
GACTTGGTGCCTAAGGTGCCACCCGCGACTGTTGGCTTTAGCCACGCAAGTCCTGAGTACTGGATTACTAGTGGC
GACAATACGACGGTGACCTCGTCTGATATTGATGTCATTGTCGGCGTGGGCTCGAAGTCTGGAAATGCGGGGACG
TTGAATCCGGATACTGCAGCACACAACTGGTACTTGGGACATATTGATGCATGCAAATAG
Transcript >Pro_DTO377G3_2|g6542.t1
ATGCTTCTTCTTGGTCGTCTTTGGAGTATCGCTGCTCTTGCGGCGCTGACGGTTGCTGCTCCTTCTCGTTCTGTT
CCTCGAGATGTGTCGGCTGATGTGCTCGGTCAATTGACCCTGTTCTCGCAGTGGGCTGCAGCATCATACTGCACG
AACAATAGCAACTCCACCGGCGATGGGGTATCTTGCGAGCAAGGCAACTGCCCCTTGGTGGAGTCCGCTGACACA
ACTACTCTATACGAGTTTGACGAGACCTCCAGCTATGGTGATGTTGCCGGCTTCCTCGCGGTTGACAAGACAAAC
AAGCTACTTGTTGTCTCATTCCGAGGCAGTCGCACACTGAGTAACTGGATCGCGAACATCAACTTTGGCTTCACC
GATGCTAGTAGTATCTGCAGCGGTTGCGAAGCCCACGGCGGGTTCTTGGAAGCCTGGGAGGCTGTCGCAGCTGAT
CTGACATCCAAGATCAAGGCCGCAAAGGCAACATACTCGGGCTACACTCTTGTCGTGACAGGCCACAGCTATGGC
GGAGCCCTTGCCACGTTGGGAGGTATTGTGCTTCGAAATGGCGGATATGAACCAAGTGTGTATACTTATGGCCAG
CCACGGGTGGGTAACAAGGCTCTAGCTCAATATATCACAGACCAGGGCAGTCTCTGGCGAGTGACACATACAGAC
GACTTGGTGCCTAAGGTGCCACCCGCGACTGTTGGCTTTAGCCACGCAAGTCCTGAGTACTGGATTACTAGTGGC
GACAATACGACGGTGACCTCGTCTGATATTGATGTCATTGTCGGCGTGGGCTCGAAGTCTGGAAATGCGGGGACG
TTGAATCCGGATACTGCAGCACACAACTGGTACTTGGGACATATTGATGCATGCAAATAG
Gene >Pro_DTO377G3_2|g6542.t1
ATGCTTCTTCTTGGTCGTCTTTGGAGTATCGCTGCTCTTGCGGCGCTGACGGTTGCTGCTCCTTCTCGTTCTGTT
CCTCGAGGTATGAATGCGTTTGCCTTTTGTTCATGCCATCCGATGATTGACCAACTGACGCAAGCAATAGATGTG
TCGGCTGATGTGCTCGGTCAATTGACCCTGTTCTCGCAGTGGGCTGCAGCATCATACTGCACGAACAATAGCAAC
TCCACCGGCGATGGGGTATCTTGCGAGCAAGGCAACTGCCCCTTGGTGGAGTCCGCTGACACAACTACTCTATAC
GAGTTTGACGAGTATGAGACCAACTTCCAATGTCATTCACAAGTCGTTCGCTAATACAGTGACACCTTTCAGGAC
CTCCAGCTATGGTGATGTTGCCGGCTTCCTCGCGGTTGACAAGACAAACAAGCTACTTGTTGTCTCATTCCGAGG
CAGTCGCACACTGAGTAACTGGATCGCGAACATCAACTTTGGCTTCACCGATGCTAGTAGTATCTGCAGCGGTTG
CGAAGCCCACGGCGGGTTCTTGGAAGCCTGGGAGGCTGTCGCAGCTGATCTGACATCCAAGATCAAGGCCGCAAA
GGCAACATACTCGGGCTACACTCTTGTCGTGACAGGCCACAGCTATGGCGGAGCCCTTGCCACGTTGGGAGGTAT
TGTGCTTCGAAATGGCGGATATGAACCAAGTGTGGTAAGTACCATGTTTGGAAATCTGCCTTAATTGATAGTGTA
TACTCACAATGAGACTAGTATACTTATGGCCAGCCACGGGTGGGTAACAAGGCTCTAGCTCAATATATCACAGAC
CAGGGCAGTCTCTGGCGAGTGACACATACAGACGACTTGGTGCCTAAGGTGCCACCCGCGACTGTTGGCTTTAGC
CACGCAAGTCCTGAGTACTGGATTACTAGTGGCGACAATACGACGGTGACCTCGTCTGATATTGATGTCATTGTC
GGCGTGGGCTCGAAGTCTGGAAATGCGGGGACGTTGAATCCGGATACTGCAGCACACAACTGGTACTTGGGACAT
ATTGATGCATGCAAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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