© 2023 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g6540.t1 |
| Gene name | |
| Location | scaffold_17:475101..475914 |
| Strand | - |
| Gene length (bp) | 813 |
| Transcript length (bp) | 813 |
| Coding sequence length (bp) | 813 |
| Protein length (aa) | 271 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01121 | CoaE | Dephospho-CoA kinase | 6.8E-42 | 2 | 190 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004140 | dephospho-CoA kinase activity | Yes |
| GO:0005524 | ATP binding | Yes |
| GO:0015937 | coenzyme A biosynthetic process | Yes |
| GO:0006793 | phosphorus metabolic process | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:1901360 | organic cyclic compound metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:0016740 | transferase activity | No |
| GO:0090407 | organophosphate biosynthetic process | No |
| GO:0019438 | aromatic compound biosynthetic process | No |
| GO:0000166 | nucleotide binding | No |
| GO:0008152 | metabolic process | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:0009152 | purine ribonucleotide biosynthetic process | No |
| GO:0006796 | phosphate-containing compound metabolic process | No |
| GO:0005488 | binding | No |
| GO:0006753 | nucleoside phosphate metabolic process | No |
| GO:0046390 | ribose phosphate biosynthetic process | No |
| GO:0055086 | nucleobase-containing small molecule metabolic process | No |
| GO:0009058 | biosynthetic process | No |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups | No |
| GO:0009260 | ribonucleotide biosynthetic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044271 | cellular nitrogen compound biosynthetic process | No |
| GO:0035639 | purine ribonucleoside triphosphate binding | No |
| GO:0034033 | purine nucleoside bisphosphate biosynthetic process | No |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0019693 | ribose phosphate metabolic process | No |
| GO:0015936 | coenzyme A metabolic process | No |
| GO:0009117 | nucleotide metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0033875 | ribonucleoside bisphosphate metabolic process | No |
| GO:0043167 | ion binding | No |
| GO:0072522 | purine-containing compound biosynthetic process | No |
| GO:1901566 | organonitrogen compound biosynthetic process | No |
| GO:0006163 | purine nucleotide metabolic process | No |
| GO:0006725 | cellular aromatic compound metabolic process | No |
| GO:0034654 | nucleobase-containing compound biosynthetic process | No |
| GO:0044237 | cellular metabolic process | No |
| GO:0018130 | heterocycle biosynthetic process | No |
| GO:0033865 | nucleoside bisphosphate metabolic process | No |
| GO:1901137 | carbohydrate derivative biosynthetic process | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0043168 | anion binding | No |
| GO:1901135 | carbohydrate derivative metabolic process | No |
| GO:0006164 | purine nucleotide biosynthetic process | No |
| GO:1901293 | nucleoside phosphate biosynthetic process | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:0034032 | purine nucleoside bisphosphate metabolic process | No |
| GO:1901564 | organonitrogen compound metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:1901576 | organic substance biosynthetic process | No |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor | No |
| GO:0044238 | primary metabolic process | No |
| GO:0072521 | purine-containing compound metabolic process | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0044281 | small molecule metabolic process | No |
| GO:0034641 | cellular nitrogen compound metabolic process | No |
| GO:0036094 | small molecule binding | No |
| GO:0046483 | heterocycle metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:1901362 | organic cyclic compound biosynthetic process | No |
| GO:0009165 | nucleotide biosynthetic process | No |
| GO:0009150 | purine ribonucleotide metabolic process | No |
| GO:0009259 | ribonucleotide metabolic process | No |
| GO:0016301 | kinase activity | No |
| GO:0006807 | nitrogen compound metabolic process | No |
| GO:0044249 | cellular biosynthetic process | No |
| GO:0006139 | nucleobase-containing compound metabolic process | No |
| GO:0034030 | ribonucleoside bisphosphate biosynthetic process | No |
| GO:0033866 | nucleoside bisphosphate biosynthetic process | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0019637 | organophosphate metabolic process | No |
| GO:0032553 | ribonucleotide binding | No |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 229 | 251 | 22 |
| Orthofinder run ID | 2 |
| Orthogroup | 6619 |
| Change Orthofinder run |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g6540.t1 MLIIGLTGSIATGKSTVSSILSTPPYSLPIIDADLLARKVVEPGTAGYKAIVNYFGPSTPDLLLDDAPTNPNGKP LNRPALGRRIFGSTEERKRDRQVLNGIVHPAVRWEVYKALIYHYLRGQWAVVLDVPLLFESGMDLICGTVIVVGV HDPEIQTARLRARDAHLTAEDAANRVQSQGDVRTKATQAEFRGTTTGRGVVVWNDADKAQLEVAVRGAMASIAAS SPKWWAWTLLAVPPVGVGVAAWNLIVNFATQKGWEKKKQEEKAKL* |
| Coding | >Pro_DTO377G3_2|g6540.t1 ATGCTGATCATCGGGCTCACCGGCTCAATAGCAACGGGCAAGTCTACTGTCTCGTCCATCCTCTCCACACCACCC TACTCCCTCCCAATAATCGACGCCGATCTCCTCGCCCGCAAAGTAGTCGAACCCGGCACCGCAGGCTACAAAGCT ATCGTCAACTACTTCGGCCCTAGTACACCAGATCTACTATTGGACGATGCGCCTACAAATCCAAACGGGAAGCCA CTGAATCGGCCAGCGTTAGGGCGGCGCATTTTCGGCAGCACAGAAGAACGCAAACGGGATCGACAAGTCCTCAAC GGCATCGTCCACCCCGCCGTACGGTGGGAAGTCTACAAAGCCCTAATCTACCACTACCTGCGTGGCCAATGGGCG GTTGTCCTGGATGTACCGCTCCTCTTCGAGAGCGGGATGGATCTCATCTGCGGAACCGTAATCGTGGTCGGGGTT CACGATCCTGAAATCCAAACGGCGCGGTTGCGCGCCCGCGATGCACATCTCACAGCCGAGGATGCAGCGAACCGG GTCCAGAGTCAGGGAGATGTGCGGACGAAAGCGACGCAGGCGGAGTTCCGGGGGACGACGACGGGGCGCGGGGTA GTGGTTTGGAATGATGCTGATAAAGCACAGCTGGAGGTTGCTGTTAGGGGGGCTATGGCTAGTATTGCAGCTTCC AGTCCGAAATGGTGGGCTTGGACCTTGTTGGCTGTGCCGCCGGTTGGGGTTGGGGTTGCTGCTTGGAATTTGATT GTGAATTTCGCGACGCAGAAGGGGTGGGAGAAAAAGAAGCAGGAGGAGAAGGCGAAGCTTTGA |
| Transcript | >Pro_DTO377G3_2|g6540.t1 ATGCTGATCATCGGGCTCACCGGCTCAATAGCAACGGGCAAGTCTACTGTCTCGTCCATCCTCTCCACACCACCC TACTCCCTCCCAATAATCGACGCCGATCTCCTCGCCCGCAAAGTAGTCGAACCCGGCACCGCAGGCTACAAAGCT ATCGTCAACTACTTCGGCCCTAGTACACCAGATCTACTATTGGACGATGCGCCTACAAATCCAAACGGGAAGCCA CTGAATCGGCCAGCGTTAGGGCGGCGCATTTTCGGCAGCACAGAAGAACGCAAACGGGATCGACAAGTCCTCAAC GGCATCGTCCACCCCGCCGTACGGTGGGAAGTCTACAAAGCCCTAATCTACCACTACCTGCGTGGCCAATGGGCG GTTGTCCTGGATGTACCGCTCCTCTTCGAGAGCGGGATGGATCTCATCTGCGGAACCGTAATCGTGGTCGGGGTT CACGATCCTGAAATCCAAACGGCGCGGTTGCGCGCCCGCGATGCACATCTCACAGCCGAGGATGCAGCGAACCGG GTCCAGAGTCAGGGAGATGTGCGGACGAAAGCGACGCAGGCGGAGTTCCGGGGGACGACGACGGGGCGCGGGGTA GTGGTTTGGAATGATGCTGATAAAGCACAGCTGGAGGTTGCTGTTAGGGGGGCTATGGCTAGTATTGCAGCTTCC AGTCCGAAATGGTGGGCTTGGACCTTGTTGGCTGTGCCGCCGGTTGGGGTTGGGGTTGCTGCTTGGAATTTGATT GTGAATTTCGCGACGCAGAAGGGGTGGGAGAAAAAGAAGCAGGAGGAGAAGGCGAAGCTTTGA |
| Gene | >Pro_DTO377G3_2|g6540.t1 ATGCTGATCATCGGGCTCACCGGCTCAATAGCAACGGGCAAGTCTACTGTCTCGTCCATCCTCTCCACACCACCC TACTCCCTCCCAATAATCGACGCCGATCTCCTCGCCCGCAAAGTAGTCGAACCCGGCACCGCAGGCTACAAAGCT ATCGTCAACTACTTCGGCCCTAGTACACCAGATCTACTATTGGACGATGCGCCTACAAATCCAAACGGGAAGCCA CTGAATCGGCCAGCGTTAGGGCGGCGCATTTTCGGCAGCACAGAAGAACGCAAACGGGATCGACAAGTCCTCAAC GGCATCGTCCACCCCGCCGTACGGTGGGAAGTCTACAAAGCCCTAATCTACCACTACCTGCGTGGCCAATGGGCG GTTGTCCTGGATGTACCGCTCCTCTTCGAGAGCGGGATGGATCTCATCTGCGGAACCGTAATCGTGGTCGGGGTT CACGATCCTGAAATCCAAACGGCGCGGTTGCGCGCCCGCGATGCACATCTCACAGCCGAGGATGCAGCGAACCGG GTCCAGAGTCAGGGAGATGTGCGGACGAAAGCGACGCAGGCGGAGTTCCGGGGGACGACGACGGGGCGCGGGGTA GTGGTTTGGAATGATGCTGATAAAGCACAGCTGGAGGTTGCTGTTAGGGGGGCTATGGCTAGTATTGCAGCTTCC AGTCCGAAATGGTGGGCTTGGACCTTGTTGGCTGTGCCGCCGGTTGGGGTTGGGGTTGCTGCTTGGAATTTGATT GTGAATTTCGCGACGCAGAAGGGGTGGGAGAAAAAGAAGCAGGAGGAGAAGGCGAAGCTTTGA |