Protein ID | Pro_DTO377G3_2|g6534.t1 |
Gene name | |
Location | scaffold_17:465867..467541 |
Strand | - |
Gene length (bp) | 1674 |
Transcript length (bp) | 1521 |
Coding sequence length (bp) | 1521 |
Protein length (aa) | 507 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00251 | Glyco_hydro_32N | Glycosyl hydrolases family 32 N-terminal domain | 8.4E-63 | 29 | 241 |
PF00251 | Glyco_hydro_32N | Glycosyl hydrolases family 32 N-terminal domain | 9.6E-20 | 243 | 337 |
PF08244 | Glyco_hydro_32C | Glycosyl hydrolases family 32 C terminal | 1.7E-31 | 348 | 498 |
SignalP signal predicted | Location | Score |
---|---|---|
Yes | 1 - 17 | 0.99977 |
CAZyme category | E-value | Start | End |
---|---|---|---|
GH32 | 4.0E-64 | 29 | 242 |
Orthofinder run ID | 2 |
Orthogroup | 6613 |
Change Orthofinder run |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g6534.t1 MGILLALALGLLGTASGLDYTEPYRPQYHFSPAENWMNDPNGLLYHDGTYHLFFQYNPAGVEWGNMSWGHATSSD LTHWEEHPIALLARGYPNEVTEMFFSGSAVADVNNTSGFGVDGKIPLVAMYTSSYPVSQDLPSGKSITAGQQSQS IAYSLDEGETWTTYDAENPVIHNPPSPYEAEFENFRDPFVFWHGDTQKWIAVTTLASLHKLLIWSSDNLKEWSLA SEFGPYNSVGGVWECPRTQYFIGDFDGTTFQADPASIYPGNSSANWMDWGPDFYAAASYNGLPNGDVVQIAWMNN WQYGTEIPTSPWRSAMSVPRQLSLQTINGKVTLVQQPQQNWQSVANHQTLQHSWKSVSKGSTKLNSPGKAFKIDL SFSDHDSKKSLASTFAIAVRASSDFKQETLIGYNFTSKEVFVDRRNSGDASFDDTFATLYHTSLSAGADKRINLQ IFVDWSSVEVFGGQGEVSLTAQIFPKEDATEARLVSTDGVTQNVKLQINGINSAWH* |
Coding | >Pro_DTO377G3_2|g6534.t1 ATGGGCATATTACTCGCATTGGCCCTGGGTCTGCTCGGGACAGCGTCCGGCCTGGACTATACCGAACCATACCGT CCTCAATACCATTTCTCCCCTGCCGAAAATTGGATGAACGATCCTAACGGACTACTATATCACGATGGCACTTAC CATCTTTTCTTTCAATATAACCCGGCTGGTGTTGAATGGGGGAATATGTCGTGGGGTCATGCAACGAGTAGCGAT TTGACCCACTGGGAAGAGCACCCGATTGCTCTACTTGCTCGCGGATATCCCAACGAGGTCACCGAGATGTTCTTC TCAGGAAGTGCGGTAGCAGATGTGAACAATACGAGTGGCTTCGGAGTGGATGGAAAGATTCCTTTGGTCGCCATG TATACTTCTTCGTATCCCGTGTCTCAAGACCTACCAAGCGGAAAATCTATTACCGCAGGGCAGCAATCCCAGTCA ATCGCCTATAGTCTCGACGAGGGAGAGACGTGGACAACATACGATGCCGAGAATCCTGTAATTCATAACCCACCC TCTCCATATGAAGCAGAATTCGAAAACTTCCGGGACCCCTTCGTATTCTGGCATGGCGATACACAGAAATGGATA GCCGTCACAACTCTGGCATCACTCCACAAGCTGCTGATATGGAGTTCTGACAACCTCAAAGAGTGGTCCTTGGCC AGCGAGTTCGGACCCTACAACTCTGTCGGCGGCGTATGGGAATGTCCCAGAACACAATACTTCATCGGCGACTTC GACGGAACAACTTTCCAGGCTGATCCTGCTAGCATCTATCCAGGAAACAGTTCTGCCAACTGGATGGATTGGGGT CCGGACTTTTATGCTGCTGCCAGTTATAACGGACTTCCTAATGGAGATGTGGTCCAGATTGCGTGGATGAATAAT TGGCAGTATGGCACGGAGATCCCGACAAGCCCTTGGCGAAGCGCCATGTCTGTTCCCCGTCAGTTGTCATTGCAG ACGATCAATGGGAAGGTGACCCTCGTTCAACAACCGCAACAGAACTGGCAGAGTGTTGCCAACCACCAGACCTTG CAACATTCCTGGAAATCCGTATCGAAAGGATCAACCAAACTGAACTCCCCCGGCAAGGCATTCAAGATCGACTTG AGCTTTTCCGATCATGACTCCAAAAAATCTCTTGCATCTACGTTTGCGATCGCTGTCCGTGCTAGCTCTGACTTT AAGCAAGAAACACTGATCGGCTACAACTTTACCAGCAAGGAGGTCTTCGTGGATCGGCGAAATTCAGGAGATGCA TCTTTTGACGACACTTTTGCAACCTTGTATCACACATCACTGTCAGCAGGCGCGGATAAACGTATCAACCTGCAG ATCTTCGTGGATTGGTCTAGTGTTGAGGTATTTGGGGGTCAAGGAGAGGTCTCTTTGACGGCTCAGATATTCCCT AAGGAAGATGCAACTGAAGCGCGACTTGTCTCGACGGATGGAGTGACCCAGAACGTCAAGCTTCAGATCAACGGG ATTAATTCAGCGTGGCACTAG |
Transcript | >Pro_DTO377G3_2|g6534.t1 ATGGGCATATTACTCGCATTGGCCCTGGGTCTGCTCGGGACAGCGTCCGGCCTGGACTATACCGAACCATACCGT CCTCAATACCATTTCTCCCCTGCCGAAAATTGGATGAACGATCCTAACGGACTACTATATCACGATGGCACTTAC CATCTTTTCTTTCAATATAACCCGGCTGGTGTTGAATGGGGGAATATGTCGTGGGGTCATGCAACGAGTAGCGAT TTGACCCACTGGGAAGAGCACCCGATTGCTCTACTTGCTCGCGGATATCCCAACGAGGTCACCGAGATGTTCTTC TCAGGAAGTGCGGTAGCAGATGTGAACAATACGAGTGGCTTCGGAGTGGATGGAAAGATTCCTTTGGTCGCCATG TATACTTCTTCGTATCCCGTGTCTCAAGACCTACCAAGCGGAAAATCTATTACCGCAGGGCAGCAATCCCAGTCA ATCGCCTATAGTCTCGACGAGGGAGAGACGTGGACAACATACGATGCCGAGAATCCTGTAATTCATAACCCACCC TCTCCATATGAAGCAGAATTCGAAAACTTCCGGGACCCCTTCGTATTCTGGCATGGCGATACACAGAAATGGATA GCCGTCACAACTCTGGCATCACTCCACAAGCTGCTGATATGGAGTTCTGACAACCTCAAAGAGTGGTCCTTGGCC AGCGAGTTCGGACCCTACAACTCTGTCGGCGGCGTATGGGAATGTCCCAGAACACAATACTTCATCGGCGACTTC GACGGAACAACTTTCCAGGCTGATCCTGCTAGCATCTATCCAGGAAACAGTTCTGCCAACTGGATGGATTGGGGT CCGGACTTTTATGCTGCTGCCAGTTATAACGGACTTCCTAATGGAGATGTGGTCCAGATTGCGTGGATGAATAAT TGGCAGTATGGCACGGAGATCCCGACAAGCCCTTGGCGAAGCGCCATGTCTGTTCCCCGTCAGTTGTCATTGCAG ACGATCAATGGGAAGGTGACCCTCGTTCAACAACCGCAACAGAACTGGCAGAGTGTTGCCAACCACCAGACCTTG CAACATTCCTGGAAATCCGTATCGAAAGGATCAACCAAACTGAACTCCCCCGGCAAGGCATTCAAGATCGACTTG AGCTTTTCCGATCATGACTCCAAAAAATCTCTTGCATCTACGTTTGCGATCGCTGTCCGTGCTAGCTCTGACTTT AAGCAAGAAACACTGATCGGCTACAACTTTACCAGCAAGGAGGTCTTCGTGGATCGGCGAAATTCAGGAGATGCA TCTTTTGACGACACTTTTGCAACCTTGTATCACACATCACTGTCAGCAGGCGCGGATAAACGTATCAACCTGCAG ATCTTCGTGGATTGGTCTAGTGTTGAGGTATTTGGGGGTCAAGGAGAGGTCTCTTTGACGGCTCAGATATTCCCT AAGGAAGATGCAACTGAAGCGCGACTTGTCTCGACGGATGGAGTGACCCAGAACGTCAAGCTTCAGATCAACGGG ATTAATTCAGCGTGGCACTAG |
Gene | >Pro_DTO377G3_2|g6534.t1 ATGGGCATATTACTCGCATTGGCCCTGGGTCTGCTCGGGACAGCGTCCGGCCTGGACTATACCGAACCATACCGT CCTCAATACCATTTCTCCCCTGCCGAAAATTGGATGAACGATCCTAACGGACTACTATATCACGATGGCACTTAC CATCTTTTCTTTCAATATAACCCGGCTGGTGTTGAATGGGGGAATATGTCGTGGGGTCATGCAACGAGTAGCGAT TTGACCCACTGGGAAGAGCACCCGATTGCTCTACTTGCTCGCGGATATCCCAACGAGGTCACCGAGATGTTCTTC TCAGGAAGTGCGGTAGCAGATGTGAACAATACGAGTGGCTTCGGAGTGGATGGAAAGATTCCTTTGGTCGCCATG TATACTTCTTCGGTACGCGTGGCTATTTCACTTGATCACTGATGGAGACTGACAAGATTCATAAAGTATCCCGTG TCTCAAGACCTACCAAGCGGAAAATCTATTACCGCAGGGCAGCAATCCCAGTCAATCGCCTATAGTCTCGACGAG GGAGAGACGTGGACAACATACGATGCCGAGAATCCTGTAATTCATAACCCACCCTCTCCATATGAAGCAGAATTC GAAAACTTCCGGGACCCCTTCGTATTCTGGCATGGCGATACACAGAAATGGATAGCCGTCACAACTCTGGCATCA CTCCACAAGCTGCTGATATGGAGTTCTGACAACCTCAAAGAGTGGTCCTTGGCCAGCGAGTTCGGACCCTACAAC TCTGTCGGCGGCGTATGGGAATGTCCCAGTTTGATTCAACTGCCCGTCAAAGGAAAGAAATCAATCAAGAAATGA GTAATTGTTCTTGGGCTCAATCCTGGTGGACCACCTGGCACGGTCGGATCAGGAACACAATACTTCATCGGCGAC TTCGACGGAACAACTTTCCAGGCTGATCCTGCTAGCATCTATCCAGGAAACAGTTCTGCCAACTGGATGGATTGG GGTCCGGACTTTTATGCTGCTGCCAGTTATAACGGACTTCCTAATGGAGATGTGGTCCAGATTGCGTGGATGAAT AATTGGCAGTATGGCACGGAGATCCCGACAAGCCCTTGGCGAAGCGCCATGTCTGTTCCCCGTCAGTTGTCATTG CAGACGATCAATGGGAAGGTGACCCTCGTTCAACAACCGCAACAGAACTGGCAGAGTGTTGCCAACCACCAGACC TTGCAACATTCCTGGAAATCCGTATCGAAAGGATCAACCAAACTGAACTCCCCCGGCAAGGCATTCAAGATCGAC TTGAGCTTTTCCGATCATGACTCCAAAAAATCTCTTGCATCTACGTTTGCGATCGCTGTCCGTGCTAGCTCTGAC TTTAAGCAAGAAACACTGATCGGCTACAACTTTACCAGCAAGGAGGTCTTCGTGGATCGGCGAAATTCAGGAGAT GCATCTTTTGACGACACTTTTGCAACCTTGTATCACACATCACTGTCAGCAGGCGCGGATAAACGTATCAACCTG CAGATCTTCGTGGATTGGTCTAGTGTTGAGGTATTTGGGGGTCAAGGAGAGGTCTCTTTGACGGCTCAGATATTC CCTAAGGAAGATGCAACTGAAGCGCGACTTGTCTCGACGGATGGAGTGACCCAGAACGTCAAGCTTCAGATCAAC GGGATTAATTCAGCGTGGCACTAG |