Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6533.t1
Gene name
Locationscaffold_17:462237..463223
Strand-
Gene length (bp)986
Transcript length (bp)885
Coding sequence length (bp)885
Protein length (aa) 295

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF05630 NPP1 Necrosis inducing protein (NPP1) 3.0E-04 115 192

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6533.t1
MQFKLGASLAVLAVSHVAVAALTQITNDEMSSLLDAGGLDLADRYAPIWFFGQAQNQPPCYPTWAYSGSPDTSDV
YDAAHKTPAAAQCDYPDVGCNCRNPGVGIRNEGPAFPVYYTYRQCNETEIRVVYNLFYEKDGANFAGINTGHDYD
WERVVIIHSRDSDNMWAPSRALLSAHSGYHNLAWGDIQNTLTTDEINAGDAKTPNGVKGNDHPKVYVSWSKHAHF
DTRNTGWNDPASQSLDTAFRSDDWWYSVNPQYYIRADDSTEAGKVIGAADWGSASSDPVSVQDGVCAAS*
Coding >Pro_DTO377G3_2|g6533.t1
ATGCAGTTCAAGCTAGGAGCTAGCTTGGCAGTCCTGGCCGTCAGCCATGTGGCAGTGGCAGCTCTCACACAGATA
ACAAATGATGAGATGAGCTCCCTCCTCGATGCCGGTGGTTTAGATCTAGCAGACCGCTACGCGCCCATCTGGTTC
TTTGGGCAAGCCCAGAACCAGCCACCCTGCTATCCAACCTGGGCGTACAGCGGCTCACCGGATACATCGGATGTC
TACGATGCTGCCCACAAGACACCGGCCGCGGCACAGTGTGATTACCCAGATGTCGGGTGCAATTGTCGCAACCCT
GGCGTTGGTATCCGAAATGAGGGACCTGCATTTCCCGTTTACTATACATACCGACAATGCAACGAAACCGAGATT
CGCGTCGTGTATAATCTCTTTTACGAGAAAGACGGCGCAAATTTTGCTGGCATCAACACTGGGCATGACTATGAC
TGGGAACGAGTGGTGATCATCCACTCTCGGGATAGCGACAACATGTGGGCACCATCACGCGCCCTGCTTTCTGCG
CATAGCGGGTACCACAACCTGGCCTGGGGCGATATCCAAAACACCCTTACGACCGACGAGATCAATGCCGGAGAT
GCCAAAACCCCGAACGGTGTAAAGGGGAATGATCACCCCAAGGTGTATGTGTCGTGGTCGAAGCATGCTCACTTC
GATACTCGCAATACCGGCTGGAACGATCCGGCGAGTCAATCACTGGATACTGCATTCCGGAGTGATGATTGGTGG
TACTCCGTCAATCCACAGTACTATATTCGAGCGGATGATAGTACGGAGGCTGGTAAGGTTATCGGCGCTGCTGAT
TGGGGTAGCGCAAGCAGTGATCCGGTGTCGGTGCAGGATGGTGTATGCGCGGCTTCATAG
Transcript >Pro_DTO377G3_2|g6533.t1
ATGCAGTTCAAGCTAGGAGCTAGCTTGGCAGTCCTGGCCGTCAGCCATGTGGCAGTGGCAGCTCTCACACAGATA
ACAAATGATGAGATGAGCTCCCTCCTCGATGCCGGTGGTTTAGATCTAGCAGACCGCTACGCGCCCATCTGGTTC
TTTGGGCAAGCCCAGAACCAGCCACCCTGCTATCCAACCTGGGCGTACAGCGGCTCACCGGATACATCGGATGTC
TACGATGCTGCCCACAAGACACCGGCCGCGGCACAGTGTGATTACCCAGATGTCGGGTGCAATTGTCGCAACCCT
GGCGTTGGTATCCGAAATGAGGGACCTGCATTTCCCGTTTACTATACATACCGACAATGCAACGAAACCGAGATT
CGCGTCGTGTATAATCTCTTTTACGAGAAAGACGGCGCAAATTTTGCTGGCATCAACACTGGGCATGACTATGAC
TGGGAACGAGTGGTGATCATCCACTCTCGGGATAGCGACAACATGTGGGCACCATCACGCGCCCTGCTTTCTGCG
CATAGCGGGTACCACAACCTGGCCTGGGGCGATATCCAAAACACCCTTACGACCGACGAGATCAATGCCGGAGAT
GCCAAAACCCCGAACGGTGTAAAGGGGAATGATCACCCCAAGGTGTATGTGTCGTGGTCGAAGCATGCTCACTTC
GATACTCGCAATACCGGCTGGAACGATCCGGCGAGTCAATCACTGGATACTGCATTCCGGAGTGATGATTGGTGG
TACTCCGTCAATCCACAGTACTATATTCGAGCGGATGATAGTACGGAGGCTGGTAAGGTTATCGGCGCTGCTGAT
TGGGGTAGCGCAAGCAGTGATCCGGTGTCGGTGCAGGATGGTGTATGCGCGGCTTCATAG
Gene >Pro_DTO377G3_2|g6533.t1
ATGCAGTTCAAGCTAGGAGCTAGCTTGGCAGTCCTGGCCGTCAGCCATGTGGCAGTGGCAGCTCTCACACAGATA
ACAAATGATGAGATGAGCTCCCTCCTCGATGCCGGTGGTTTAGATCTAGCAGACCGCTACGCGCCCATCTGGTTC
TTTGGGCAAGCCCAGAACCAGCCACCCTGCTATCCAACCTGGGCGTACAGCGGCTCACCGGATACATCGGATGTC
TACGATGCTGCCCACAAGACACCGGCCGCGGCACAGTGTGATTACCCAGATGTCGGGTGCAATTGTCGCAACCCT
GGCGTTGGTATCCGAAATGAGGGACCTGCATTTCCCGTTTACTATACATACCGACAATGCAACGAAACCGAGATT
CGCGTCGTGTATAATCTCTTTTACGAGAAAGACGGCGCAAATTTTGCTGGCATCAACACTGGGCATGACTAGTAG
GTGACCCTTTCTGGCCTTGTGGTTCAGCCCAACTCTAACATCGTTCCAGTGACTGGGAACGAGTGGTGATCATCC
ACTCTCGGGATAGCGACAACATGTGGGCACCATCACGCGCCCTGCTTTCTGCGCATAGCGGGTACCACAACCTGG
CCTGGGGCGATATCCAAAACACCCTTACGACCGACGAGATCAATGCCGGAGATGCCAAAACCCCGAACGGTGTAA
AGGGGAATGATCACCCCAAGGTGTATGTGTCGTGGTCGAAGCATGCTCACTTCGATACTCGCAATACCGGCTGGA
ACGATCCGGCGAGTCAATCACTGGATACTGCATTCCGGAGTGATGATTGGTGGTACTCCGTCAATCCACAGTACT
ATGTAAGTTTCTTGATTTGCAATGTGGAGCCAATGCTGATGTTTCGATAGATTCGAGCGGATGATAGTACGGAGG
CTGGTAAGGTTATCGGCGCTGCTGATTGGGGTAGCGCAAGCAGTGATCCGGTGTCGGTGCAGGATGGTGTATGCG
CGGCTTCATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail