© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g6528.t1 |
| Gene name | |
| Location | scaffold_17:452692..454328 |
| Strand | + |
| Gene length (bp) | 1636 |
| Transcript length (bp) | 1311 |
| Coding sequence length (bp) | 1311 |
| Protein length (aa) | 437 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF16499 | Melibiase_2 | Alpha galactosidase A | 3.0E-36 | 30 | 155 |
| PF16499 | Melibiase_2 | Alpha galactosidase A | 1.2E-19 | 196 | 331 |
| PF17801 | Melibiase_C | Alpha galactosidase C-terminal beta sandwich domain | 1.3E-11 | 355 | 431 |
| PF02065 | Melibiase | Melibiase | 6.0E-08 | 34 | 116 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | Yes |
| GO:0005975 | carbohydrate metabolic process | Yes |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0008150 | biological_process | No |
| GO:0044238 | primary metabolic process | No |
| GO:0008152 | metabolic process | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| GO:0016787 | hydrolase activity | No |
| GO:0071704 | organic substance metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 20 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g6528.t1 MLAPFTLAVALHLLPVANALVRESGVGRLPALGWNSWNAFGCDINSTKVLTAANEVVNLGLKDLGYEYINIDDCW SIQNTRDNSTNRIIPDPSKFPDGISGVAEQVHDLGLKIGIYSSAGDETCAHYPASLGYETVDAQSFADWGIDYLK YDNCGVPSNWTDSYHYCVPEGSGSHPNGTCPDLSDPAPEGYDWKTSNTYARYTAMRNALLSLDRTILYSLCDWGQ ADVNTWGNETGNSWRMSDDINANWARIAEIANENSFLMKYVDFWGHPDPDMLEVGNGALTLEENRAHFALWAIMK SPLIIGTALDSISDDHVAILKNKYLIDFNQDPVFGSPAHPYKWGYNPDWTFDAVHPAEYWSGTSSTLQGTLVLML NSENVTSTRTATWSEVPQLKSHDAYHVIDAWTSKDLGCVKTEYSTSLESHDVAVLVVKRRC* |
| Coding | >Pro_DTO377G3_2|g6528.t1 ATGCTAGCGCCATTCACTCTCGCTGTTGCATTGCATTTGCTACCAGTAGCAAATGCCCTGGTTAGGGAAAGTGGT GTTGGTAGATTGCCTGCTCTAGGATGGAATTCCTGGAATGCATTCGGATGTGATATCAATTCCACCAAGGTTCTA ACCGCTGCCAATGAGGTTGTTAATCTTGGACTGAAGGATCTGGGTTATGAGTATATCAACATCGATGACTGCTGG AGTATTCAGAACACCCGCGATAATAGCACAAATCGCATCATTCCAGATCCATCCAAGTTCCCCGATGGTATCTCC GGTGTTGCAGAGCAAGTCCATGATTTGGGACTGAAAATCGGCATTTACAGCAGTGCTGGTGATGAGACTTGTGCC CATTATCCCGCTAGTCTGGGATACGAGACAGTCGATGCGCAGTCTTTTGCTGACTGGGGTATTGATTACCTCAAA TATGACAACTGCGGTGTCCCCAGTAATTGGACGGATTCATACCATTACTGTGTTCCTGAGGGCTCTGGTAGCCAC CCTAATGGCACCTGTCCTGATCTTAGCGATCCCGCCCCAGAAGGATATGACTGGAAAACATCGAACACATATGCC CGGTATACTGCAATGCGTAATGCTTTACTCAGCCTTGACCGAACAATCTTATATTCTCTTTGTGACTGGGGCCAG GCTGACGTCAATACCTGGGGTAATGAAACCGGAAATTCATGGCGCATGTCTGACGATATCAACGCAAATTGGGCC CGTATTGCAGAAATTGCCAATGAGAATAGCTTCCTGATGAAATATGTCGATTTCTGGGGTCATCCTGACCCGGAC ATGTTGGAGGTTGGTAATGGAGCTCTTACTCTCGAGGAAAATAGGGCACACTTTGCCCTTTGGGCCATCATGAAG TCCCCTTTAATCATTGGCACGGCGCTTGATTCTATCAGCGATGACCACGTGGCCATTCTGAAGAACAAGTATCTT ATTGACTTCAACCAAGACCCTGTTTTTGGCAGTCCTGCCCATCCTTATAAGTGGGGTTACAATCCCGACTGGACT TTCGACGCCGTCCATCCAGCAGAGTATTGGTCTGGTACATCCTCCACTTTACAGGGCACTTTGGTGCTAATGCTG AATTCCGAGAATGTGACTTCTACTCGCACTGCGACATGGAGCGAGGTTCCCCAGCTCAAGAGCCATGATGCATAT CATGTCATTGATGCTTGGACTAGCAAGGATCTGGGCTGCGTGAAGACTGAGTATAGCACCTCCTTGGAGAGTCAT GATGTGGCTGTGCTGGTGGTCAAGAGACGATGCTAG |
| Transcript | >Pro_DTO377G3_2|g6528.t1 ATGCTAGCGCCATTCACTCTCGCTGTTGCATTGCATTTGCTACCAGTAGCAAATGCCCTGGTTAGGGAAAGTGGT GTTGGTAGATTGCCTGCTCTAGGATGGAATTCCTGGAATGCATTCGGATGTGATATCAATTCCACCAAGGTTCTA ACCGCTGCCAATGAGGTTGTTAATCTTGGACTGAAGGATCTGGGTTATGAGTATATCAACATCGATGACTGCTGG AGTATTCAGAACACCCGCGATAATAGCACAAATCGCATCATTCCAGATCCATCCAAGTTCCCCGATGGTATCTCC GGTGTTGCAGAGCAAGTCCATGATTTGGGACTGAAAATCGGCATTTACAGCAGTGCTGGTGATGAGACTTGTGCC CATTATCCCGCTAGTCTGGGATACGAGACAGTCGATGCGCAGTCTTTTGCTGACTGGGGTATTGATTACCTCAAA TATGACAACTGCGGTGTCCCCAGTAATTGGACGGATTCATACCATTACTGTGTTCCTGAGGGCTCTGGTAGCCAC CCTAATGGCACCTGTCCTGATCTTAGCGATCCCGCCCCAGAAGGATATGACTGGAAAACATCGAACACATATGCC CGGTATACTGCAATGCGTAATGCTTTACTCAGCCTTGACCGAACAATCTTATATTCTCTTTGTGACTGGGGCCAG GCTGACGTCAATACCTGGGGTAATGAAACCGGAAATTCATGGCGCATGTCTGACGATATCAACGCAAATTGGGCC CGTATTGCAGAAATTGCCAATGAGAATAGCTTCCTGATGAAATATGTCGATTTCTGGGGTCATCCTGACCCGGAC ATGTTGGAGGTTGGTAATGGAGCTCTTACTCTCGAGGAAAATAGGGCACACTTTGCCCTTTGGGCCATCATGAAG TCCCCTTTAATCATTGGCACGGCGCTTGATTCTATCAGCGATGACCACGTGGCCATTCTGAAGAACAAGTATCTT ATTGACTTCAACCAAGACCCTGTTTTTGGCAGTCCTGCCCATCCTTATAAGTGGGGTTACAATCCCGACTGGACT TTCGACGCCGTCCATCCAGCAGAGTATTGGTCTGGTACATCCTCCACTTTACAGGGCACTTTGGTGCTAATGCTG AATTCCGAGAATGTGACTTCTACTCGCACTGCGACATGGAGCGAGGTTCCCCAGCTCAAGAGCCATGATGCATAT CATGTCATTGATGCTTGGACTAGCAAGGATCTGGGCTGCGTGAAGACTGAGTATAGCACCTCCTTGGAGAGTCAT GATGTGGCTGTGCTGGTGGTCAAGAGACGATGCTAG |
| Gene | >Pro_DTO377G3_2|g6528.t1 ATGCTAGCGCCATTCACTCTCGCTGTTGCATTGCATTTGCTACCAGTAGCAAATGCCCTGGTTAGGGAAAGTGGT GTTGTATGTTTTCTTCTGTCATGAACTAATCACAGAGATACTGACTCAAATAAGGGTAGATTGCCTGCTCTAGGA TGGAATTCCTGGAATGCATTCGGATGTGATATCAATTCCACCAAGGTTCTAACCGCTGCCAATGAGGTTGTTAAT CTTGGACTGAAGGATCTGGGTTATGAGTATATCAACAGTATGAACCGAGCTTTGCATAAAATGGGTTGAATCACT GACCCTTTCTAGTCGATGACTGCTGGAGTATTCAGAACACCCGCGATAATAGCACAAATCGCATCATTCCAGATC CATCCAAGTTCCCCGATGGTATCTCCGGTGTTGCAGAGCAAGTCCATGATTTGGGACTGAAAATCGGCATTTACA GCAGTTAGTATCCCCTCCGTCTGTATACTGATCAGAAATCAAGACTGATATACGCCAGGTGCTGGTGATGAGACT TGTGCCCATTATCCCGCTAGTCTGGGATACGAGACAGTCGATGCGCAGTCTTTTGCTGACTGGGGTATTGATTGT AAGTTTTTTTGTATTCCCGTGAATCTGCTTTCACCTAAATGCTAAAACTCGTAGACCTCAAATATGACAACTGCG GTGTCCCCAGTAATTGGACGGATTCATACCATTACTGTGTTCCTGAGGGCTCTGGTAGCCACCCTAATGGCACCT GTCCTGATCTTAGCGATCCCGCCCCAGAAGGATATGACTGGAAAACATCGAACACATATGCCCGGTATACTGCAA TGCGTAATGCTTTACTCAGCCTTGACCGAACAATCTTATATTCTCTTTGTGACTGGGGCCAGGCTGACGTCAATA CCTGGGGTAATGAAACCGGAAATTCATGGCGCATGTCTGACGATATCAACGGTAAGTTGTTTGACTGATACGCAG TGGTAGATTTAGAAGCTGACTCTGTGTTCAGCAAATTGGGCCCGTATTGCAGAAATTGCCAATGAGAATAGCTTC CTGATGAAATATGTCGATTTCTGGGGTCATCCTGACCCGGACATGTTGGAGGTTGGTAATGGAGCTCTTACTCTC GAGGAAAATAGGGCACACTTTGCCCTTTGGGCCATCATGAAGTCCCCTTTAATCATTGGCACGGCGGTATGTGGT ATCTTTGGATGTCTTATGCTTATGGCAAGATATACTGACAACCCCAAAGCTTGATTCTATCAGCGATGACCACGT GGCCATTCTGAAGAACAAGTATCTTATTGACTTCAACCAAGACCCTGTTTTTGGCAGTCCTGCCCATCCTTATAA GTGGGGTTACAATCCCGACTGGACTTTCGACGCCGTCCATCCAGCAGAGTATTGGTCTGGTACATCCTCCACTTT ACAGGGCACTTTGGTGCTAATGCTGAATTCCGAGAATGTGACTTCTACTCGCACTGCGACATGGAGCGAGGTTCC CCAGCTCAAGAGCCATGATGCATATCATGTCATTGATGCTTGGACTAGCAAGGATCTGGGCTGCGTGAAGACTGA GTATAGCACCTCCTTGGAGAGTCATGATGTGGCTGTGCTGGTGGTCAAGAGACGATGCTAG |