Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6524.t1
Gene name
Locationscaffold_17:442397..444514
Strand+
Gene length (bp)2117
Transcript length (bp)1860
Coding sequence length (bp)1860
Protein length (aa) 620

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00641 zf-RanBP Zn-finger in Ran binding protein and others 7.8E-11 352 379
PF00641 zf-RanBP Zn-finger in Ran binding protein and others 4.1E-09 429 459
PF00076 RRM_1 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 1.9E-07 257 324
PF00929 RNase_T Exonuclease 1.0E-06 21 135

GO

GO Term Description Terminal node
GO:0003676 nucleic acid binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6524.t1
MAAVSAPTPKLDRYIVIHVATTCDEHGVYVTKDSAEVIELGWILLDTKTCEELHRESVLVKPVNTPITPLCTSLT
TLTWEHVRSAGTFRDAISRFDAFAQEHLISKHLEFAFVTLDSWDLRVQLPREARDKAVVLPAYLQHSRTFDLRTE
YQRWQTHHPESLPFGPSSLSNICAALEVEPVQSSAPIKHNLPFHLQALAPASPRRAMEESVTLARVLRGLIRKSQ
PPQEHPEILTRPMDAHADVRAFLAERSKVLHLSGLPHDTTQSELESWFTQFGGRPIAFWTLRTPDQHKPTGTGFA
VFSSHEEAAESLCMNGRALNEKAIEVSPSSSRVLDRAAEILTPFPPSKNRPRPGDWTCPSCGFSNFQRRTACFRC
SFPAMAAAPDPMNYGNYGYGPPSMMPPHMGHGGHGMGGGHSRGMGGNGGVVPFRAGDWKCGSEGCGYHNFAKNIN
CLRCGAPRSGAAVVADSAFPSPMDPPSQFNMGPNSMTSTPAPAPFASTAGGFGGFGQQFGGPPNNYALPSGGLGN
NTPGAYPPMGQMNSGYGSSGTSHSAASFANPATQAAFTGADHGVPSTSASNGAFYGTDGASDPFAFLSSGLGGLT
VSDDPHSRRNGSGANKSPA*
Coding >Pro_DTO377G3_2|g6524.t1
ATGGCGGCCGTTTCAGCACCAACCCCCAAGCTGGATCGATACATCGTCATCCACGTTGCAACCACCTGCGACGAA
CATGGCGTATATGTGACCAAGGACTCGGCTGAGGTCATTGAGTTAGGCTGGATCTTGTTGGACACCAAGACCTGC
GAGGAATTGCACCGCGAAAGTGTTCTCGTCAAACCCGTCAATACTCCAATCACCCCGCTTTGCACGAGCTTGACC
ACTTTGACATGGGAACACGTTCGCTCCGCAGGCACTTTCCGGGACGCCATCTCTCGATTCGACGCCTTCGCCCAA
GAACACCTCATTAGCAAACATCTCGAGTTTGCTTTTGTGACTTTGGACTCGTGGGATCTGCGGGTGCAGCTGCCC
CGCGAGGCCCGCGACAAGGCCGTCGTGCTTCCCGCATACCTGCAGCACTCCCGTACTTTCGACTTGCGAACAGAA
TATCAGCGCTGGCAGACGCACCACCCCGAGTCGCTTCCTTTCGGTCCCAGCTCGCTCTCCAACATCTGCGCTGCC
CTCGAGGTCGAGCCCGTTCAGTCGTCCGCCCCGATTAAGCACAACCTTCCTTTCCATTTGCAAGCTTTGGCCCCC
GCTTCGCCCCGCCGTGCCATGGAGGAATCTGTTACTCTCGCCCGTGTGCTTCGTGGTTTGATTCGCAAGTCGCAG
CCGCCCCAGGAACACCCTGAGATCCTCACTCGTCCTATGGATGCTCATGCCGACGTTCGGGCCTTTTTGGCGGAA
CGGAGCAAGGTCCTGCACCTTAGTGGTCTGCCCCACGATACCACTCAGTCTGAGTTGGAGAGCTGGTTCACTCAG
TTCGGCGGTCGTCCCATCGCATTCTGGACTCTGCGGACGCCAGACCAGCACAAGCCCACTGGAACTGGCTTTGCC
GTCTTCTCTTCACACGAGGAGGCTGCCGAAAGCCTGTGCATGAACGGCCGTGCGCTCAATGAAAAGGCGATTGAG
GTCTCTCCCTCTTCCAGCCGGGTTCTAGACCGGGCCGCCGAGATTCTCACTCCTTTCCCGCCCTCCAAGAACCGT
CCCCGTCCTGGTGACTGGACTTGCCCGTCTTGCGGCTTCTCTAACTTCCAGCGCCGCACAGCATGCTTCCGCTGC
TCGTTCCCCGCCATGGCGGCTGCACCCGACCCAATGAACTACGGAAACTACGGCTACGGTCCGCCATCAATGATG
CCTCCTCACATGGGCCACGGCGGTCACGGTATGGGTGGTGGTCACTCGCGTGGTATGGGTGGCAACGGCGGCGTT
GTCCCCTTCCGCGCAGGCGACTGGAAGTGTGGTTCTGAGGGCTGTGGCTATCACAACTTTGCGAAGAACATCAAC
TGTCTACGCTGCGGTGCCCCTCGCTCGGGCGCTGCCGTCGTGGCAGACTCGGCATTCCCGTCCCCGATGGATCCA
CCGTCGCAATTTAATATGGGGCCCAACTCGATGACTAGCACCCCTGCACCAGCTCCGTTCGCCTCGACCGCCGGT
GGATTCGGTGGATTCGGTCAGCAGTTTGGTGGCCCGCCTAACAACTACGCTCTGCCCTCGGGTGGCCTGGGTAAC
AACACCCCCGGTGCGTACCCTCCCATGGGTCAGATGAACTCGGGCTACGGCTCTTCCGGCACCTCGCACTCCGCC
GCCTCGTTCGCCAACCCGGCCACTCAGGCTGCTTTCACTGGTGCGGACCACGGTGTTCCATCCACCAGTGCTTCG
AACGGTGCCTTCTACGGTACCGATGGTGCTAGCGACCCTTTCGCCTTCTTGTCCAGTGGCCTCGGTGGTCTGACA
GTGTCTGACGACCCCCACTCTCGTCGCAACGGCTCCGGTGCCAACAAGTCGCCCGCTTAA
Transcript >Pro_DTO377G3_2|g6524.t1
ATGGCGGCCGTTTCAGCACCAACCCCCAAGCTGGATCGATACATCGTCATCCACGTTGCAACCACCTGCGACGAA
CATGGCGTATATGTGACCAAGGACTCGGCTGAGGTCATTGAGTTAGGCTGGATCTTGTTGGACACCAAGACCTGC
GAGGAATTGCACCGCGAAAGTGTTCTCGTCAAACCCGTCAATACTCCAATCACCCCGCTTTGCACGAGCTTGACC
ACTTTGACATGGGAACACGTTCGCTCCGCAGGCACTTTCCGGGACGCCATCTCTCGATTCGACGCCTTCGCCCAA
GAACACCTCATTAGCAAACATCTCGAGTTTGCTTTTGTGACTTTGGACTCGTGGGATCTGCGGGTGCAGCTGCCC
CGCGAGGCCCGCGACAAGGCCGTCGTGCTTCCCGCATACCTGCAGCACTCCCGTACTTTCGACTTGCGAACAGAA
TATCAGCGCTGGCAGACGCACCACCCCGAGTCGCTTCCTTTCGGTCCCAGCTCGCTCTCCAACATCTGCGCTGCC
CTCGAGGTCGAGCCCGTTCAGTCGTCCGCCCCGATTAAGCACAACCTTCCTTTCCATTTGCAAGCTTTGGCCCCC
GCTTCGCCCCGCCGTGCCATGGAGGAATCTGTTACTCTCGCCCGTGTGCTTCGTGGTTTGATTCGCAAGTCGCAG
CCGCCCCAGGAACACCCTGAGATCCTCACTCGTCCTATGGATGCTCATGCCGACGTTCGGGCCTTTTTGGCGGAA
CGGAGCAAGGTCCTGCACCTTAGTGGTCTGCCCCACGATACCACTCAGTCTGAGTTGGAGAGCTGGTTCACTCAG
TTCGGCGGTCGTCCCATCGCATTCTGGACTCTGCGGACGCCAGACCAGCACAAGCCCACTGGAACTGGCTTTGCC
GTCTTCTCTTCACACGAGGAGGCTGCCGAAAGCCTGTGCATGAACGGCCGTGCGCTCAATGAAAAGGCGATTGAG
GTCTCTCCCTCTTCCAGCCGGGTTCTAGACCGGGCCGCCGAGATTCTCACTCCTTTCCCGCCCTCCAAGAACCGT
CCCCGTCCTGGTGACTGGACTTGCCCGTCTTGCGGCTTCTCTAACTTCCAGCGCCGCACAGCATGCTTCCGCTGC
TCGTTCCCCGCCATGGCGGCTGCACCCGACCCAATGAACTACGGAAACTACGGCTACGGTCCGCCATCAATGATG
CCTCCTCACATGGGCCACGGCGGTCACGGTATGGGTGGTGGTCACTCGCGTGGTATGGGTGGCAACGGCGGCGTT
GTCCCCTTCCGCGCAGGCGACTGGAAGTGTGGTTCTGAGGGCTGTGGCTATCACAACTTTGCGAAGAACATCAAC
TGTCTACGCTGCGGTGCCCCTCGCTCGGGCGCTGCCGTCGTGGCAGACTCGGCATTCCCGTCCCCGATGGATCCA
CCGTCGCAATTTAATATGGGGCCCAACTCGATGACTAGCACCCCTGCACCAGCTCCGTTCGCCTCGACCGCCGGT
GGATTCGGTGGATTCGGTCAGCAGTTTGGTGGCCCGCCTAACAACTACGCTCTGCCCTCGGGTGGCCTGGGTAAC
AACACCCCCGGTGCGTACCCTCCCATGGGTCAGATGAACTCGGGCTACGGCTCTTCCGGCACCTCGCACTCCGCC
GCCTCGTTCGCCAACCCGGCCACTCAGGCTGCTTTCACTGGTGCGGACCACGGTGTTCCATCCACCAGTGCTTCG
AACGGTGCCTTCTACGGTACCGATGGTGCTAGCGACCCTTTCGCCTTCTTGTCCAGTGGCCTCGGTGGTCTGACA
GTGTCTGACGACCCCCACTCTCGTCGCAACGGCTCCGGTGCCAACAAGTCGCCCGCTTAA
Gene >Pro_DTO377G3_2|g6524.t1
ATGGCGGCCGTTTCAGCACCAACCCCCAAGCTGGATCGATACATCGTCATCCACGTTGCAACCACCTGCGACGAA
CATGGCGTATATGTGACCAAGGACTCGGCTGAGGTCATTGAGTTAGGCTGGATCTTGTTGGACACCAAGACCTGC
GAGGAAGTCCGTTCCCCCCAGTGTCTTCTACCCAACATACAACTTACTCCCGAGACCATGGAAGCTGACATATTT
TTTTCCCCAATTGTTTAGTTGCACCGCGAAAGTGTTCTCGTCAAACCCGTCAATACTCCAATCACCCCGCTTTGC
AGTAAGATCGCCTTGAAAACAACCTTGGATTGCATTGGGTTTTGCTAGGAATCCAATTTGTGGCTGACAATTCTC
TGAAGCGAGCTTGACCACTTTGACATGGGAACACGTTCGCTCCGCAGGCACTTTCCGGGACGCCATCTCTCGATT
CGACGCCTTCGCCCAAGAACACCTCATTAGCAAACATCTCGAGTTTGCTTTTGTGACTTTGGACTCGTGGGATCT
GCGGGTGCAGCTGCCCCGCGAGGCCCGCGACAAGGCCGTCGTGCTTCCCGCATACCTGCAGCACTCCCGTACTTT
CGACTTGCGAACAGAATATCAGCGCTGGCAGACGCACCACCCCGAGTCGCTTCCTTTCGGTCCCAGCTCGCTCTC
CAACATCTGCGCTGCCCTCGAGGTCGAGCCCGTTCAGTCGTCCGCCCCGATTAAGCACAACCTTCCTTTCCATTT
GCAAGCTTTGGCCCCCGCTTCGCCCCGCCGTGCCATGGAGGAATCTGTTACTCTCGCCCGTGTGCTTCGTGGTTT
GATTCGCAAGTCGCAGCCGCCCCAGGAACACCCTGAGATCCTCACTCGTCCTATGGATGCTCATGCCGACGTTCG
GGCCTTTTTGGCGGAACGGAGCAAGGTCCTGCACCTTAGTGGTCTGCCCCACGATACCACTCAGTCTGAGTTGGA
GAGCTGGTTCACTCAGTTCGGCGGTCGTCCCATCGCATTCTGGACTCTGCGGACGCCAGACCAGCACAAGCCCAC
TGGAACTGGCTTTGCCGTCTTCTCTTCACACGAGGAGGTGAGTTTGCATCTTGGTATTCATTTGGCTGTTCTACG
CTACAGAACTTCCTGTGTTTTATCCTTAGTCTTGCCTACTAACTGTTTACTAGGCTGCCGAAAGCCTGTGCATGA
ACGGCCGTGCGCTCAATGAAAAGGCGATTGAGGTCTCTCCCTCTTCCAGCCGGGTTCTAGACCGGGCCGCCGAGA
TTCTCACTCCTTTCCCGCCCTCCAAGAACCGTCCCCGTCCTGGTGACTGGACTTGCCCGTCTTGCGGCTTCTCTA
ACTTCCAGCGCCGCACAGCATGCTTCCGCTGCTCGTTCCCCGCCATGGCGGCTGCACCCGACCCAATGAACTACG
GAAACTACGGCTACGGTCCGCCATCAATGATGCCTCCTCACATGGGCCACGGCGGTCACGGTATGGGTGGTGGTC
ACTCGCGTGGTATGGGTGGCAACGGCGGCGTTGTCCCCTTCCGCGCAGGCGACTGGAAGTGTGGTTCTGAGGGCT
GTGGCTATCACAACTTTGCGAAGAACATCAACTGTCTACGCTGCGGTGCCCCTCGCTCGGGCGCTGCCGTCGTGG
CAGACTCGGCATTCCCGTCCCCGATGGATCCACCGTCGCAATTTAATATGGGGCCCAACTCGATGACTAGCACCC
CTGCACCAGCTCCGTTCGCCTCGACCGCCGGTGGATTCGGTGGATTCGGTCAGCAGTTTGGTGGCCCGCCTAACA
ACTACGCTCTGCCCTCGGGTGGCCTGGGTAACAACACCCCCGGTGCGTACCCTCCCATGGGTCAGATGAACTCGG
GCTACGGCTCTTCCGGCACCTCGCACTCCGCCGCCTCGTTCGCCAACCCGGCCACTCAGGCTGCTTTCACTGGTG
CGGACCACGGTGTTCCATCCACCAGTGCTTCGAACGGTGCCTTCTACGGTACCGATGGTGCTAGCGACCCTTTCG
CCTTCTTGTCCAGTGGCCTCGGTGGTCTGACAGTGTCTGACGACCCCCACTCTCGTCGCAACGGCTCCGGTGCCA
ACAAGTCGCCCGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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