Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6512.t1
Gene name
Locationscaffold_17:416928..418047
Strand-
Gene length (bp)1119
Transcript length (bp)945
Coding sequence length (bp)945
Protein length (aa) 315

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04321 RmlD_sub_bind RmlD substrate binding domain 4.1E-56 4 294
PF01370 Epimerase NAD dependent epimerase/dehydratase family 2.6E-21 5 188
PF07993 NAD_binding_4 Male sterility protein 1.2E-08 50 180
PF01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 4.4E-08 42 182
PF02719 Polysacc_synt_2 Polysaccharide biosynthesis protein 9.8E-07 45 113
PF16363 GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 2.7E-07 41 159

GO

GO Term Description Terminal node
GO:0006694 steroid biosynthetic process Yes
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0009058 biosynthetic process No
GO:0003824 catalytic activity No
GO:0008202 steroid metabolic process No
GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor No
GO:0008150 biological_process No
GO:1901360 organic cyclic compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0008152 metabolic process No
GO:0006629 lipid metabolic process No
GO:0003674 molecular_function No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0016491 oxidoreductase activity No
GO:1901576 organic substance biosynthetic process No
GO:0016229 steroid dehydrogenase activity No
GO:0044238 primary metabolic process No
GO:0008610 lipid biosynthetic process No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID2
Orthogroup6592
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g7231.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g8260.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g8382.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g8116.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g996.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g8445.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g9479.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g8503.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g1648.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g8904.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g8756.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g6123.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g10411.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g8042.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g5266.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g7695.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g3298.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g8118.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g7881.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g6613.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g7944.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g6640.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g2064.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g7417.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g8911.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g7085.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g6686.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g7250.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g9139.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g8854.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g7715.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g2550.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g7197.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g6512.t1 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6512.t1
MTSNVLVTGASGLLGRSVFNTFQHSGVLVVGQGFTRPAPPTILKADLEKEEDIRMLFDEVKPQIVIHCAANRSPD
LCDQHPDQARKVNVDATRALAKECQARGAFLIYISTDYVFPGTEGEAPYEANAETKPPNLYGQLKRDGEVAVLEE
TSASGMGVVLRVPVLYGTAKNNSESAINTLIDAVTKATDENAGVKMDDWGIRYPTNTEDVARVCRDIVIKYLREK
EKRKDFPHILQFTSEDRMTKYEICQKLAKVMGVAIPGMIPNKQGNDPNSSVVRPYDTHLSTKALTELGIDVRTVD
FIAWWRREMGAYRK*
Coding >Pro_DTO377G3_2|g6512.t1
ATGACATCTAACGTTCTTGTTACTGGAGCCAGTGGCTTGCTCGGCCGTTCTGTTTTCAACACCTTCCAGCACTCG
GGCGTGTTGGTTGTTGGCCAGGGATTCACCCGCCCTGCCCCGCCTACTATCTTGAAGGCCGACCTGGAGAAGGAG
GAGGATATCCGAATGCTGTTCGATGAAGTCAAGCCTCAGATTGTCATCCATTGCGCCGCAAACAGGTCCCCGGAC
CTATGTGACCAGCACCCAGATCAAGCCCGCAAGGTCAATGTCGATGCCACTCGAGCACTGGCTAAGGAATGCCAA
GCTCGCGGCGCCTTCCTCATCTACATCTCGACCGACTACGTCTTCCCCGGCACCGAAGGCGAGGCACCATACGAG
GCCAATGCCGAGACCAAGCCACCGAATCTGTACGGGCAATTGAAGCGTGATGGCGAGGTGGCCGTATTAGAAGAG
ACCAGTGCCTCAGGCATGGGCGTGGTGCTGCGCGTGCCGGTGCTGTACGGCACCGCCAAGAATAACTCGGAGAGC
GCGATCAACACCCTCATCGACGCAGTAACAAAGGCTACGGATGAAAACGCCGGCGTGAAAATGGACGACTGGGGC
ATACGGTACCCAACCAACACCGAGGACGTGGCGCGCGTGTGTCGGGACATTGTCATCAAGTACCTGCGCGAGAAG
GAGAAGCGGAAGGACTTCCCTCACATCCTGCAATTTACGTCCGAGGACCGTATGACCAAGTATGAGATTTGTCAG
AAGTTGGCCAAGGTGATGGGTGTGGCCATTCCCGGAATGATCCCCAATAAGCAGGGCAATGATCCCAATTCGAGT
GTCGTACGGCCTTATGATACACATCTGTCTACCAAGGCATTGACTGAGCTTGGGATTGATGTGCGAACAGTGGAC
TTCATTGCGTGGTGGCGCCGGGAAATGGGTGCTTATAGGAAATAA
Transcript >Pro_DTO377G3_2|g6512.t1
ATGACATCTAACGTTCTTGTTACTGGAGCCAGTGGCTTGCTCGGCCGTTCTGTTTTCAACACCTTCCAGCACTCG
GGCGTGTTGGTTGTTGGCCAGGGATTCACCCGCCCTGCCCCGCCTACTATCTTGAAGGCCGACCTGGAGAAGGAG
GAGGATATCCGAATGCTGTTCGATGAAGTCAAGCCTCAGATTGTCATCCATTGCGCCGCAAACAGGTCCCCGGAC
CTATGTGACCAGCACCCAGATCAAGCCCGCAAGGTCAATGTCGATGCCACTCGAGCACTGGCTAAGGAATGCCAA
GCTCGCGGCGCCTTCCTCATCTACATCTCGACCGACTACGTCTTCCCCGGCACCGAAGGCGAGGCACCATACGAG
GCCAATGCCGAGACCAAGCCACCGAATCTGTACGGGCAATTGAAGCGTGATGGCGAGGTGGCCGTATTAGAAGAG
ACCAGTGCCTCAGGCATGGGCGTGGTGCTGCGCGTGCCGGTGCTGTACGGCACCGCCAAGAATAACTCGGAGAGC
GCGATCAACACCCTCATCGACGCAGTAACAAAGGCTACGGATGAAAACGCCGGCGTGAAAATGGACGACTGGGGC
ATACGGTACCCAACCAACACCGAGGACGTGGCGCGCGTGTGTCGGGACATTGTCATCAAGTACCTGCGCGAGAAG
GAGAAGCGGAAGGACTTCCCTCACATCCTGCAATTTACGTCCGAGGACCGTATGACCAAGTATGAGATTTGTCAG
AAGTTGGCCAAGGTGATGGGTGTGGCCATTCCCGGAATGATCCCCAATAAGCAGGGCAATGATCCCAATTCGAGT
GTCGTACGGCCTTATGATACACATCTGTCTACCAAGGCATTGACTGAGCTTGGGATTGATGTGCGAACAGTGGAC
TTCATTGCGTGGTGGCGCCGGGAAATGGGTGCTTATAGGAAATAA
Gene >Pro_DTO377G3_2|g6512.t1
ATGACATCTAACGTTCTTGTTACTGGAGCCAGTGGCTTGCTCGGCCGTTCTGTTTTCAACACCTTCCAGCACTCG
GGCGTGTTGGTTGTTGGCCAGGGATTCACCCGCCCTGCCCCGCCTACTATCTTGAAGGCCGACCTGGAGAAGGAG
GAGGATATCCGAATGCTGTTCGATGAAGTCAAGTATGTATATTCCATTTAGATCTTGATTATAGACATTAATCAC
CTTTGAACTATGCCTAGGCCTCAGATTGTCATCCATTGTAAGCTAGTTAATTGGCTGACTTGATACCCCATCATA
GACTGACAGCTCACAGGCGCCGCAAACAGGTCCCCGGACCTATGTGACCAGCACCCAGATCAAGCCCGCAAGGTC
AATGTCGATGCCACTCGAGCACTGGCTAAGGAATGCCAAGCTCGCGGCGCCTTCCTCATCTACATCTCGACCGAC
TACGTCTTCCCCGGCACCGAAGGCGAGGCACCATACGAGGCCAATGCCGAGACCAAGCCACCGAATCTGTACGGG
CAATTGAAGCGTGATGGCGAGGTGGCCGTATTAGAAGAGACCAGTGCCTCAGGCATGGGCGTGGTGCTGCGCGTG
CCGGTGCTGTACGGCACCGCCAAGAATAACTCGGAGAGCGCGATCAACACCCTCATCGACGCAGTAACAAAGGCT
ACGGATGAAAACGCCGGCGTGAAAATGGACGACTGGGGCATACGGTACCCAACCAACACCGAGGACGTGGCGCGC
GTGTGTCGGGACATTGTCATCAAGTACCTGCGCGAGAAGGAGAAGCGGAAGGACTTCCCTCACATCCTGCAATTT
ACGTCCGAGGACCGTATGACCAAGTATGAGATTTGTCAGAAGTTGGCCAAGGTGATGGGTGTGGCCATTCCCGGA
ATGATCCCCAATAAGCAGGGCAATGATCCCAATTCGAGTGTCGTACGGCCTTATGATACACATCTGTCTACCAAG
GCATTGACTGAGCTTGGGATTGATGTGCGAACAGTGGACTTCATTGCGTGGTGGTAAGTTCTCCCCGGGGTGTAC
CTATACCTTGTTTGTATGTCTATGCTAACAACCCATAGGCGCCGGGAAATGGGTGCTTATAGGAAATAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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