Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6512.t1
Gene name
Locationscaffold_17:416928..418047
Strand-
Gene length (bp)1119
Transcript length (bp)945
Coding sequence length (bp)945
Protein length (aa) 315

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04321 RmlD_sub_bind RmlD substrate binding domain 4.1E-56 4 294
PF01370 Epimerase NAD dependent epimerase/dehydratase family 2.6E-21 5 188
PF07993 NAD_binding_4 Male sterility protein 1.2E-08 50 180
PF01073 3Beta_HSD 3-beta hydroxysteroid dehydrogenase/isomerase family 4.4E-08 42 182
PF02719 Polysacc_synt_2 Polysaccharide biosynthesis protein 9.8E-07 45 113
PF16363 GDP_Man_Dehyd GDP-mannose 4,6 dehydratase 2.7E-07 41 159

GO

GO Term Description Terminal node
GO:0006694 steroid biosynthetic process Yes
GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity Yes
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Yes
GO:0009058 biosynthetic process No
GO:0003824 catalytic activity No
GO:0008202 steroid metabolic process No
GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor No
GO:0008150 biological_process No
GO:1901360 organic cyclic compound metabolic process No
GO:0071704 organic substance metabolic process No
GO:0008152 metabolic process No
GO:0006629 lipid metabolic process No
GO:0003674 molecular_function No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors No
GO:0016491 oxidoreductase activity No
GO:1901576 organic substance biosynthetic process No
GO:0016229 steroid dehydrogenase activity No
GO:0044238 primary metabolic process No
GO:0008610 lipid biosynthetic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 16 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6512.t1
MTSNVLVTGASGLLGRSVFNTFQHSGVLVVGQGFTRPAPPTILKADLEKEEDIRMLFDEVKPQIVIHCAANRSPD
LCDQHPDQARKVNVDATRALAKECQARGAFLIYISTDYVFPGTEGEAPYEANAETKPPNLYGQLKRDGEVAVLEE
TSASGMGVVLRVPVLYGTAKNNSESAINTLIDAVTKATDENAGVKMDDWGIRYPTNTEDVARVCRDIVIKYLREK
EKRKDFPHILQFTSEDRMTKYEICQKLAKVMGVAIPGMIPNKQGNDPNSSVVRPYDTHLSTKALTELGIDVRTVD
FIAWWRREMGAYRK*
Coding >Pro_DTO377G3_2|g6512.t1
ATGACATCTAACGTTCTTGTTACTGGAGCCAGTGGCTTGCTCGGCCGTTCTGTTTTCAACACCTTCCAGCACTCG
GGCGTGTTGGTTGTTGGCCAGGGATTCACCCGCCCTGCCCCGCCTACTATCTTGAAGGCCGACCTGGAGAAGGAG
GAGGATATCCGAATGCTGTTCGATGAAGTCAAGCCTCAGATTGTCATCCATTGCGCCGCAAACAGGTCCCCGGAC
CTATGTGACCAGCACCCAGATCAAGCCCGCAAGGTCAATGTCGATGCCACTCGAGCACTGGCTAAGGAATGCCAA
GCTCGCGGCGCCTTCCTCATCTACATCTCGACCGACTACGTCTTCCCCGGCACCGAAGGCGAGGCACCATACGAG
GCCAATGCCGAGACCAAGCCACCGAATCTGTACGGGCAATTGAAGCGTGATGGCGAGGTGGCCGTATTAGAAGAG
ACCAGTGCCTCAGGCATGGGCGTGGTGCTGCGCGTGCCGGTGCTGTACGGCACCGCCAAGAATAACTCGGAGAGC
GCGATCAACACCCTCATCGACGCAGTAACAAAGGCTACGGATGAAAACGCCGGCGTGAAAATGGACGACTGGGGC
ATACGGTACCCAACCAACACCGAGGACGTGGCGCGCGTGTGTCGGGACATTGTCATCAAGTACCTGCGCGAGAAG
GAGAAGCGGAAGGACTTCCCTCACATCCTGCAATTTACGTCCGAGGACCGTATGACCAAGTATGAGATTTGTCAG
AAGTTGGCCAAGGTGATGGGTGTGGCCATTCCCGGAATGATCCCCAATAAGCAGGGCAATGATCCCAATTCGAGT
GTCGTACGGCCTTATGATACACATCTGTCTACCAAGGCATTGACTGAGCTTGGGATTGATGTGCGAACAGTGGAC
TTCATTGCGTGGTGGCGCCGGGAAATGGGTGCTTATAGGAAATAA
Transcript >Pro_DTO377G3_2|g6512.t1
ATGACATCTAACGTTCTTGTTACTGGAGCCAGTGGCTTGCTCGGCCGTTCTGTTTTCAACACCTTCCAGCACTCG
GGCGTGTTGGTTGTTGGCCAGGGATTCACCCGCCCTGCCCCGCCTACTATCTTGAAGGCCGACCTGGAGAAGGAG
GAGGATATCCGAATGCTGTTCGATGAAGTCAAGCCTCAGATTGTCATCCATTGCGCCGCAAACAGGTCCCCGGAC
CTATGTGACCAGCACCCAGATCAAGCCCGCAAGGTCAATGTCGATGCCACTCGAGCACTGGCTAAGGAATGCCAA
GCTCGCGGCGCCTTCCTCATCTACATCTCGACCGACTACGTCTTCCCCGGCACCGAAGGCGAGGCACCATACGAG
GCCAATGCCGAGACCAAGCCACCGAATCTGTACGGGCAATTGAAGCGTGATGGCGAGGTGGCCGTATTAGAAGAG
ACCAGTGCCTCAGGCATGGGCGTGGTGCTGCGCGTGCCGGTGCTGTACGGCACCGCCAAGAATAACTCGGAGAGC
GCGATCAACACCCTCATCGACGCAGTAACAAAGGCTACGGATGAAAACGCCGGCGTGAAAATGGACGACTGGGGC
ATACGGTACCCAACCAACACCGAGGACGTGGCGCGCGTGTGTCGGGACATTGTCATCAAGTACCTGCGCGAGAAG
GAGAAGCGGAAGGACTTCCCTCACATCCTGCAATTTACGTCCGAGGACCGTATGACCAAGTATGAGATTTGTCAG
AAGTTGGCCAAGGTGATGGGTGTGGCCATTCCCGGAATGATCCCCAATAAGCAGGGCAATGATCCCAATTCGAGT
GTCGTACGGCCTTATGATACACATCTGTCTACCAAGGCATTGACTGAGCTTGGGATTGATGTGCGAACAGTGGAC
TTCATTGCGTGGTGGCGCCGGGAAATGGGTGCTTATAGGAAATAA
Gene >Pro_DTO377G3_2|g6512.t1
ATGACATCTAACGTTCTTGTTACTGGAGCCAGTGGCTTGCTCGGCCGTTCTGTTTTCAACACCTTCCAGCACTCG
GGCGTGTTGGTTGTTGGCCAGGGATTCACCCGCCCTGCCCCGCCTACTATCTTGAAGGCCGACCTGGAGAAGGAG
GAGGATATCCGAATGCTGTTCGATGAAGTCAAGTATGTATATTCCATTTAGATCTTGATTATAGACATTAATCAC
CTTTGAACTATGCCTAGGCCTCAGATTGTCATCCATTGTAAGCTAGTTAATTGGCTGACTTGATACCCCATCATA
GACTGACAGCTCACAGGCGCCGCAAACAGGTCCCCGGACCTATGTGACCAGCACCCAGATCAAGCCCGCAAGGTC
AATGTCGATGCCACTCGAGCACTGGCTAAGGAATGCCAAGCTCGCGGCGCCTTCCTCATCTACATCTCGACCGAC
TACGTCTTCCCCGGCACCGAAGGCGAGGCACCATACGAGGCCAATGCCGAGACCAAGCCACCGAATCTGTACGGG
CAATTGAAGCGTGATGGCGAGGTGGCCGTATTAGAAGAGACCAGTGCCTCAGGCATGGGCGTGGTGCTGCGCGTG
CCGGTGCTGTACGGCACCGCCAAGAATAACTCGGAGAGCGCGATCAACACCCTCATCGACGCAGTAACAAAGGCT
ACGGATGAAAACGCCGGCGTGAAAATGGACGACTGGGGCATACGGTACCCAACCAACACCGAGGACGTGGCGCGC
GTGTGTCGGGACATTGTCATCAAGTACCTGCGCGAGAAGGAGAAGCGGAAGGACTTCCCTCACATCCTGCAATTT
ACGTCCGAGGACCGTATGACCAAGTATGAGATTTGTCAGAAGTTGGCCAAGGTGATGGGTGTGGCCATTCCCGGA
ATGATCCCCAATAAGCAGGGCAATGATCCCAATTCGAGTGTCGTACGGCCTTATGATACACATCTGTCTACCAAG
GCATTGACTGAGCTTGGGATTGATGTGCGAACAGTGGACTTCATTGCGTGGTGGTAAGTTCTCCCCGGGGTGTAC
CTATACCTTGTTTGTATGTCTATGCTAACAACCCATAGGCGCCGGGAAATGGGTGCTTATAGGAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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