© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g651.t1 |
| Gene name | |
| Location | scaffold_01:1668449..1670222 |
| Strand | - |
| Gene length (bp) | 1773 |
| Transcript length (bp) | 1650 |
| Coding sequence length (bp) | 1650 |
| Protein length (aa) | 550 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.8E-109 | 11 | 495 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 6.4E-22 | 22 | 369 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 19 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 12 | 34 | 22 |
| 2 | 93 | 112 | 19 |
| 3 | 158 | 180 | 22 |
| 4 | 195 | 214 | 19 |
| 5 | 286 | 308 | 22 |
| 6 | 318 | 340 | 22 |
| 7 | 349 | 368 | 19 |
| 8 | 396 | 418 | 22 |
| 9 | 431 | 453 | 22 |
| 10 | 457 | 479 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g651.t1 MFVVGNLYAITAVSVIGGALFGFDISSMSAIIGTPAYKCYFNHGPRGPPFNDDDVCSGLSTLAQGGVTAAMPGGS WLGALISGFISDRLGRKYAIMVGCVLWVIGSVIVCASQNMGMLIAGRVINGLSVGIESAQVPVYISELSPPSKRG RLVGSQQWAITWGILIMYYISFGCSFIGHGNSSTSHNYSESVFRIPWGVQAVPAVLLFFGMMVLPESPRWLARKD RWDECQAVLTLVHGKGDMNSPFVLAEMQEIRDICEFERENKDVSYLELFEPRMIHRTMTGIWTQIWSQLTGMNVM MYYITYVFTMAGYKGDATLLASSIQYIINVVMTMPALIWVDRWGRRPTLLIGAVFMMIWMFANAGIMAKYGVIVP GGIDGVAEASMLLSGAPAKGLIACTYLFVASYAPTWGPVSWVYPSELYPLRVRGKAVALATSFNWAFNTALGLFV PTAFATIRWQTYIIFGVFLFAMTIHVFFLFPETSGKTLEEIEQIFEDPNGIPYIGTPAWKTTHDTKRTMAAESGD IEILGEKLAGADKRAATHAEVVDA* |
| Coding | >Pro_DTO377G3_2|g651.t1 ATGTTTGTCGTGGGGAATCTCTACGCCATCACGGCGGTGTCCGTCATTGGCGGTGCACTGTTCGGTTTCGATATC TCGTCCATGTCGGCCATTATCGGGACGCCGGCTTATAAGTGTTATTTCAATCATGGGCCTCGGGGCCCTCCATTC AACGACGACGATGTATGTAGTGGTCTTAGCACCCTGGCTCAAGGTGGTGTTACCGCTGCCATGCCCGGTGGCTCT TGGCTCGGTGCTCTTATCTCTGGTTTCATTTCGGATCGTCTTGGTCGCAAGTATGCTATCATGGTTGGTTGTGTT CTTTGGGTTATCGGCTCCGTCATCGTATGCGCTTCCCAGAACATGGGTATGCTCATTGCCGGACGAGTCATCAAC GGTCTCAGCGTCGGAATTGAGTCCGCCCAGGTTCCTGTCTATATCTCGGAGCTTTCTCCTCCCTCCAAGCGTGGT CGTCTCGTCGGCTCTCAGCAGTGGGCCATCACCTGGGGTATCCTGATCATGTACTATATCTCCTTCGGTTGCTCA TTCATCGGACATGGCAACAGCTCCACCTCCCACAACTACAGCGAGTCCGTCTTCCGTATCCCATGGGGTGTACAG GCAGTTCCCGCTGTTCTCCTCTTCTTCGGAATGATGGTCTTGCCCGAGTCCCCTCGTTGGTTGGCCCGCAAGGAC CGCTGGGACGAGTGTCAGGCGGTGCTGACCCTGGTCCACGGCAAGGGCGACATGAACAGCCCCTTCGTTCTAGCC GAGATGCAAGAGATCCGCGACATTTGCGAGTTCGAGCGCGAGAACAAGGACGTTAGCTACCTCGAGTTGTTCGAG CCCAGGATGATCCACCGCACCATGACTGGAATCTGGACGCAAATCTGGTCCCAGCTGACCGGTATGAACGTCATG ATGTACTACATCACGTATGTTTTCACCATGGCCGGGTACAAGGGTGATGCCACCCTCCTCGCTTCCTCCATCCAG TACATCATCAACGTGGTCATGACCATGCCCGCCTTGATCTGGGTTGACCGCTGGGGCCGTCGTCCCACTCTCCTG ATCGGCGCTGTTTTCATGATGATCTGGATGTTTGCCAACGCGGGTATCATGGCCAAGTACGGCGTGATTGTCCCC GGCGGTATTGACGGCGTGGCGGAGGCATCAATGCTTCTGAGTGGCGCCCCTGCCAAGGGACTAATTGCCTGCACA TACCTGTTCGTGGCTTCGTACGCTCCGACCTGGGGTCCCGTATCGTGGGTGTACCCTTCAGAGCTGTACCCTCTA CGTGTGCGTGGTAAAGCCGTTGCTTTGGCTACCTCGTTCAACTGGGCGTTCAACACGGCGCTTGGTCTGTTCGTG CCCACTGCTTTTGCCACGATCCGCTGGCAGACGTACATCATTTTCGGTGTTTTCTTGTTCGCCATGACCATTCAC GTCTTCTTCTTGTTCCCTGAGACTTCTGGTAAGACTCTAGAGGAAATCGAGCAGATCTTTGAGGATCCCAACGGT ATCCCTTATATCGGTACCCCGGCCTGGAAGACTACCCACGATACCAAGCGCACTATGGCTGCCGAGTCGGGTGAT ATTGAGATCCTTGGTGAAAAACTGGCTGGTGCTGACAAGCGCGCTGCCACTCACGCTGAGGTTGTCGACGCATAG |
| Transcript | >Pro_DTO377G3_2|g651.t1 ATGTTTGTCGTGGGGAATCTCTACGCCATCACGGCGGTGTCCGTCATTGGCGGTGCACTGTTCGGTTTCGATATC TCGTCCATGTCGGCCATTATCGGGACGCCGGCTTATAAGTGTTATTTCAATCATGGGCCTCGGGGCCCTCCATTC AACGACGACGATGTATGTAGTGGTCTTAGCACCCTGGCTCAAGGTGGTGTTACCGCTGCCATGCCCGGTGGCTCT TGGCTCGGTGCTCTTATCTCTGGTTTCATTTCGGATCGTCTTGGTCGCAAGTATGCTATCATGGTTGGTTGTGTT CTTTGGGTTATCGGCTCCGTCATCGTATGCGCTTCCCAGAACATGGGTATGCTCATTGCCGGACGAGTCATCAAC GGTCTCAGCGTCGGAATTGAGTCCGCCCAGGTTCCTGTCTATATCTCGGAGCTTTCTCCTCCCTCCAAGCGTGGT CGTCTCGTCGGCTCTCAGCAGTGGGCCATCACCTGGGGTATCCTGATCATGTACTATATCTCCTTCGGTTGCTCA TTCATCGGACATGGCAACAGCTCCACCTCCCACAACTACAGCGAGTCCGTCTTCCGTATCCCATGGGGTGTACAG GCAGTTCCCGCTGTTCTCCTCTTCTTCGGAATGATGGTCTTGCCCGAGTCCCCTCGTTGGTTGGCCCGCAAGGAC CGCTGGGACGAGTGTCAGGCGGTGCTGACCCTGGTCCACGGCAAGGGCGACATGAACAGCCCCTTCGTTCTAGCC GAGATGCAAGAGATCCGCGACATTTGCGAGTTCGAGCGCGAGAACAAGGACGTTAGCTACCTCGAGTTGTTCGAG CCCAGGATGATCCACCGCACCATGACTGGAATCTGGACGCAAATCTGGTCCCAGCTGACCGGTATGAACGTCATG ATGTACTACATCACGTATGTTTTCACCATGGCCGGGTACAAGGGTGATGCCACCCTCCTCGCTTCCTCCATCCAG TACATCATCAACGTGGTCATGACCATGCCCGCCTTGATCTGGGTTGACCGCTGGGGCCGTCGTCCCACTCTCCTG ATCGGCGCTGTTTTCATGATGATCTGGATGTTTGCCAACGCGGGTATCATGGCCAAGTACGGCGTGATTGTCCCC GGCGGTATTGACGGCGTGGCGGAGGCATCAATGCTTCTGAGTGGCGCCCCTGCCAAGGGACTAATTGCCTGCACA TACCTGTTCGTGGCTTCGTACGCTCCGACCTGGGGTCCCGTATCGTGGGTGTACCCTTCAGAGCTGTACCCTCTA CGTGTGCGTGGTAAAGCCGTTGCTTTGGCTACCTCGTTCAACTGGGCGTTCAACACGGCGCTTGGTCTGTTCGTG CCCACTGCTTTTGCCACGATCCGCTGGCAGACGTACATCATTTTCGGTGTTTTCTTGTTCGCCATGACCATTCAC GTCTTCTTCTTGTTCCCTGAGACTTCTGGTAAGACTCTAGAGGAAATCGAGCAGATCTTTGAGGATCCCAACGGT ATCCCTTATATCGGTACCCCGGCCTGGAAGACTACCCACGATACCAAGCGCACTATGGCTGCCGAGTCGGGTGAT ATTGAGATCCTTGGTGAAAAACTGGCTGGTGCTGACAAGCGCGCTGCCACTCACGCTGAGGTTGTCGACGCATAG |
| Gene | >Pro_DTO377G3_2|g651.t1 ATGTTTGTCGTGGGGAATCTCTACGCCATCACGGCGGTGTCCGTCATTGGCGGTGCACTGTTCGGTTTCGATATC TCGTCCATGTCGGCCATTATCGGGACGCCGGCTTATAAGTGTTATTTCAATCATGGGCCTCGGGGCCCTCCATTC AACGACGACGATGTATGTAGTGGTCTTAGCACCCTGGCTCAAGGTGGTGTTACCGCTGCCATGCCCGGTGGCTCT TGGCTCGGTGCTCTTATCTCTGGTTTCATTTCGGATCGTCTTGGTCGCAAGTATGCTATCATGGTTGGTTGTGTT CTTTGGTAAGTGGTCATGGTTAGGGTGGAGTTGCCATTGAGCTGTTGTGGTTAACATCCTGTTAGGGTTATCGGC TCCGTCATCGTATGCGCTTCCCAGAACATGGGTATGCTCATTGCCGGACGAGTCATCAACGGTCTCAGCGTCGGA ATTGAGTCCGCCCAGGTTCCTGTCTATATCTCGGAGCTTTCTCCTCCCTCCAAGCGTGGTCGTCTCGTCGGCTCT CAGCAGTGGGCCATCACCTGGGGTATCCTGATCATGTACTAGTATGTGGTAACACCTGGTTTGAGATTCGAAAAG TGACTCAGTAGCTGACTCTTGTTCCACAGTATCTCCTTCGGTTGCTCATTCATCGGACATGGCAACAGCTCCACC TCCCACAACTACAGCGAGTCCGTCTTCCGTATCCCATGGGGTGTACAGGCAGTTCCCGCTGTTCTCCTCTTCTTC GGAATGATGGTCTTGCCCGAGTCCCCTCGTTGGTTGGCCCGCAAGGACCGCTGGGACGAGTGTCAGGCGGTGCTG ACCCTGGTCCACGGCAAGGGCGACATGAACAGCCCCTTCGTTCTAGCCGAGATGCAAGAGATCCGCGACATTTGC GAGTTCGAGCGCGAGAACAAGGACGTTAGCTACCTCGAGTTGTTCGAGCCCAGGATGATCCACCGCACCATGACT GGAATCTGGACGCAAATCTGGTCCCAGCTGACCGGTATGAACGTCATGATGTACTACATCACGTATGTTTTCACC ATGGCCGGGTACAAGGGTGATGCCACCCTCCTCGCTTCCTCCATCCAGTACATCATCAACGTGGTCATGACCATG CCCGCCTTGATCTGGGTTGACCGCTGGGGCCGTCGTCCCACTCTCCTGATCGGCGCTGTTTTCATGATGATCTGG ATGTTTGCCAACGCGGGTATCATGGCCAAGTACGGCGTGATTGTCCCCGGCGGTATTGACGGCGTGGCGGAGGCA TCAATGCTTCTGAGTGGCGCCCCTGCCAAGGGACTAATTGCCTGCACATACCTGTTCGTGGCTTCGTACGCTCCG ACCTGGGGTCCCGTATCGTGGGTGTACCCTTCAGAGCTGTACCCTCTACGTGTGCGTGGTAAAGCCGTTGCTTTG GCTACCTCGTTCAACTGGGCGTTCAACACGGCGCTTGGTCTGTTCGTGCCCACTGCTTTTGCCACGATCCGCTGG CAGACGTACATCATTTTCGGTGTTTTCTTGTTCGCCATGACCATTCACGTCTTCTTCTTGTTCCCTGAGACTTCT GGTAAGACTCTAGAGGAAATCGAGCAGATCTTTGAGGATCCCAACGGTATCCCTTATATCGGTACCCCGGCCTGG AAGACTACCCACGATACCAAGCGCACTATGGCTGCCGAGTCGGGTGATATTGAGATCCTTGGTGAAAAACTGGCT GGTGCTGACAAGCGCGCTGCCACTCACGCTGAGGTTGTCGACGCATAG |