Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6502.t1
Gene name
Locationscaffold_17:388357..389549
Strand+
Gene length (bp)1192
Transcript length (bp)813
Coding sequence length (bp)813
Protein length (aa) 271

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03328 HpcH_HpaI HpcH/HpaI aldolase/citrate lyase family 1.3E-36 41 245

GO

GO Term Description Terminal node
GO:0003824 catalytic activity Yes
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6502.t1
MSSIILRSALETTPVAYGFWLTLPSAAVAKTILRRSPEFSEGGFSWVLVDAEHGLITDTHYYELTNAVGHEGASP
IIRVPWPEEWMIKRALDAGAHGVMTPMCHSAEDAAKVVSYCKYPPVGVRGYGPMFTPHSFPGVKPADYDDKTHGE
VLVIVQIESRPGVENVEEIAKVEGLDVLFIGPFDLAKQMRVTRGGEEHEAAIQRVLNAARAAGKKAAIFCSDGDD
ALRRTQQGFDMVSITTDVAVFGDGMLNELEKAKGTSKVQGKRDGY*
Coding >Pro_DTO377G3_2|g6502.t1
ATGTCTTCCATCATACTCCGCTCAGCTTTGGAAACCACGCCAGTGGCATACGGCTTCTGGTTAACCCTCCCCAGT
GCCGCCGTCGCAAAGACAATTCTCCGCCGCAGTCCCGAGTTCTCGGAAGGTGGATTCAGCTGGGTTCTAGTTGAC
GCTGAACATGGATTGATTACCGACACCCACTATTATGAGCTCACTAATGCCGTCGGCCACGAGGGTGCTAGTCCT
ATTATCCGTGTGCCCTGGCCCGAAGAGTGGATGATCAAGCGTGCTCTCGATGCCGGCGCCCACGGAGTCATGACT
CCTATGTGTCACTCTGCAGAGGACGCTGCCAAGGTCGTTAGCTACTGCAAGTACCCGCCTGTCGGAGTCCGTGGA
TACGGGCCTATGTTTACGCCGCATTCATTTCCCGGCGTGAAGCCCGCCGACTATGACGACAAGACGCACGGTGAA
GTCCTCGTTATTGTGCAGATTGAGTCGCGGCCGGGTGTTGAGAATGTAGAGGAGATTGCTAAAGTCGAGGGACTT
GATGTTTTGTTTATTGGACCCTTCGACCTTGCTAAGCAGATGCGTGTCACCCGCGGTGGCGAGGAGCACGAGGCT
GCTATCCAACGTGTCTTGAATGCTGCTAGAGCTGCAGGAAAAAAGGCTGCTATCTTCTGCTCCGATGGTGATGAT
GCTCTTCGCCGCACACAGCAGGGCTTTGATATGGTTTCCATTACCACCGATGTTGCTGTCTTCGGTGACGGGATG
CTCAACGAATTAGAGAAGGCTAAGGGCACTTCTAAGGTCCAAGGAAAGCGGGACGGGTATTGA
Transcript >Pro_DTO377G3_2|g6502.t1
ATGTCTTCCATCATACTCCGCTCAGCTTTGGAAACCACGCCAGTGGCATACGGCTTCTGGTTAACCCTCCCCAGT
GCCGCCGTCGCAAAGACAATTCTCCGCCGCAGTCCCGAGTTCTCGGAAGGTGGATTCAGCTGGGTTCTAGTTGAC
GCTGAACATGGATTGATTACCGACACCCACTATTATGAGCTCACTAATGCCGTCGGCCACGAGGGTGCTAGTCCT
ATTATCCGTGTGCCCTGGCCCGAAGAGTGGATGATCAAGCGTGCTCTCGATGCCGGCGCCCACGGAGTCATGACT
CCTATGTGTCACTCTGCAGAGGACGCTGCCAAGGTCGTTAGCTACTGCAAGTACCCGCCTGTCGGAGTCCGTGGA
TACGGGCCTATGTTTACGCCGCATTCATTTCCCGGCGTGAAGCCCGCCGACTATGACGACAAGACGCACGGTGAA
GTCCTCGTTATTGTGCAGATTGAGTCGCGGCCGGGTGTTGAGAATGTAGAGGAGATTGCTAAAGTCGAGGGACTT
GATGTTTTGTTTATTGGACCCTTCGACCTTGCTAAGCAGATGCGTGTCACCCGCGGTGGCGAGGAGCACGAGGCT
GCTATCCAACGTGTCTTGAATGCTGCTAGAGCTGCAGGAAAAAAGGCTGCTATCTTCTGCTCCGATGGTGATGAT
GCTCTTCGCCGCACACAGCAGGGCTTTGATATGGTTTCCATTACCACCGATGTTGCTGTCTTCGGTGACGGGATG
CTCAACGAATTAGAGAAGGCTAAGGGCACTTCTAAGGTCCAAGGAAAGCGGGACGGGTATTGA
Gene >Pro_DTO377G3_2|g6502.t1
ATGTCTTCCATCATACTCCGCTCAGCTTTGGAAACCACGCCAGTGGCATACGGCTTCTGGTTAACGTATGTTTAC
ACCCCGCATTTGGAGAGGGGCATCACCATCCCCCGCTGCTCTTCTCAACCTCAAAGCTGTATCCAACAAGAGGAG
AAGGAATCAAGCTAACTGGCCTTCTACCACAGCCTCCCCAGTGCCGCCGTCGCAAAGACAATTCTCCGCCGCAGT
CCCGAGTTCTCGGAAGGTGGATTCAGCTGGGTTCTAGTTGACGCTGAACATGGATTGATTACCGACACCCACTAT
TATGAGGTTTGTCATTCGAGTGAATTGAACTCGAGAATTTATTATTGACAATCACATCTAGCTCACTAATGCCGT
CGGCCACGAGGGTGCTAGTCCTATTATCCGTGTGCCCTGGCCCGAAGAGTGGATGATCAAGCGTGCTCTCGATGC
CGGCGCCCACGGAGTCATGACTCCTATGTGTCACTCTGCAGTATGTGTAACCCGGACCGCTGCGTTCGCACTTTT
CTCTTTATCTGTCGGATCTGTATCTCAAATGCTAACACCCGCTTTTCTGCGTCTAATAGGAGGACGCTGCCAAGG
TCGTTAGCTACTGCAAGTACCCGCCTGTCGGAGTCCGTGGATACGGGCCTATGTTTACGCCGCATTCATTTCCCG
GCGTGAAGCCCGCCGACTATGACGACAAGACGCACGGTGAAGTCCTCGTTATTGTGCAGATTGAGTCGCGGCCGG
GTGTTGAGAATGTAGAGGAGATTGCTAAAGTCGAGGGACTTGATGTTTTGTTTATTGGTGAGATTGGACCTTTCT
GTTTATGGTTTGTGGAATTGGCTAACGGGTTTTTCCTAGGACCCTTCGACCTTGCTAAGCAGATGCGTGTCACCC
GCGGTGGCGAGGAGCACGAGGCTGCTATCCAACGTGTCTTGAATGCTGCTAGAGCTGCAGGAAAAAAGGCTGCTA
TCTTCTGTATGTGTTCTCATTTCCGATGTTCCATGGCTCATGTCTAATATTGCGTTTTTTAGGCTCCGATGGTGA
TGATGCTCTTCGCCGCACACAGCAGGGCTTTGATATGGTTTCCATTACCACCGATGTTGCTGTCTTCGGTGACGG
GATGCTCAACGAATTAGAGAAGGCTAAGGGCACTTCTAAGGTCCAAGGAAAGCGGGACGGGTATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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