Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6499.t1
Gene name
Locationscaffold_17:379542..380907
Strand+
Gene length (bp)1365
Transcript length (bp)1200
Coding sequence length (bp)1200
Protein length (aa) 400

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00270 DEAD DEAD/DEAH box helicase 1.4E-40 50 212
PF00271 Helicase_C Helicase conserved C-terminal domain 6.6E-33 251 359

GO

GO Term Description Terminal node
GO:0005524 ATP binding Yes
GO:0003676 nucleic acid binding Yes
GO:0000166 nucleotide binding No
GO:0008144 drug binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0032553 ribonucleotide binding No
GO:0017076 purine nucleotide binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0097367 carbohydrate derivative binding No
GO:0030554 adenyl nucleotide binding No
GO:1901265 nucleoside phosphate binding No
GO:0005488 binding No
GO:1901363 heterocyclic compound binding No
GO:0032559 adenyl ribonucleotide binding No
GO:0043168 anion binding No
GO:0032555 purine ribonucleotide binding No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6499.t1
MADGIDRRAEERMEFNTSKEVTVAPTFEDMHLKESLLRGVYAYGYESPSAVQSRAIVQICKGRDTIAQAQSGTGK
TATFAISTLQIIDTVVRETQALVLSPTRELATQIQSVIMALGDYMNVQCHACIGGTNVGEDIRKLEYGQHVVSGT
PGRVADMIRRRNLRTRHIKMLVLDEADELLNRGFREQIYDVYRYLPPATQVVVVSATLPYDVLDMTTKFMTDPVR
VLVKRDELTLEGIKQYFIAVEKEEWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLADKMREANFTVSSMHGEMPQ
KERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPTNRENYIHRIGRSGRFGRKGVAINFVTTDDVRI
LRDIELYYSTQIDEMPMNVADLLS*
Coding >Pro_DTO377G3_2|g6499.t1
ATGGCGGATGGAATCGACAGACGCGCCGAGGAGCGCATGGAATTCAACACCTCCAAGGAGGTGACGGTCGCGCCG
ACCTTCGAGGACATGCATTTGAAGGAAAGCCTGCTTCGTGGAGTGTACGCTTATGGATACGAATCGCCTTCGGCT
GTGCAATCCCGTGCGATTGTTCAAATCTGCAAAGGTCGCGACACGATTGCCCAGGCCCAGTCCGGTACTGGTAAA
ACTGCCACATTCGCGATCAGTACTCTGCAGATCATTGATACTGTTGTGCGCGAGACCCAAGCTCTGGTCCTGTCC
CCGACTCGTGAACTCGCAACCCAAATTCAATCCGTCATTATGGCCCTTGGTGATTACATGAACGTTCAGTGTCAC
GCTTGTATCGGAGGAACCAATGTTGGCGAAGATATCCGCAAACTCGAGTACGGCCAACACGTTGTCTCTGGAACT
CCTGGTCGTGTAGCCGATATGATTCGTCGCCGAAACCTGCGCACACGTCATATCAAGATGCTCGTTCTCGATGAG
GCTGACGAGCTCCTTAATCGCGGTTTCCGTGAGCAGATTTACGATGTTTACCGTTACCTGCCCCCCGCGACGCAG
GTCGTCGTGGTCTCAGCCACCCTCCCATACGATGTCTTGGACATGACCACCAAGTTCATGACTGACCCCGTCCGT
GTCCTGGTCAAGCGTGACGAGTTGACACTAGAGGGCATCAAGCAATACTTCATCGCCGTCGAGAAAGAGGAATGG
AAGTTCGACACACTTTGTGATCTGTACGACACCTTGACTATCACCCAGGCCGTTATCTTCTGCAACACTCGCCGA
AAGGTCGACTGGCTTGCCGACAAGATGCGTGAGGCCAATTTCACCGTCTCTAGTATGCACGGCGAGATGCCTCAG
AAAGAGCGTGATAGTATTATGCAAGACTTCCGTCAGGGTAATTCCCGTGTCCTCATTTCTACTGATGTCTGGGCC
CGTGGTATCGATGTCCAACAAGTCTCTCTTGTTATCAACTACGATCTGCCTACCAACCGTGAGAACTACATTCAC
CGTATCGGTCGATCTGGACGATTCGGCCGCAAGGGTGTGGCCATCAACTTTGTCACCACCGATGATGTCCGCATT
CTTCGCGACATCGAGTTGTACTACTCGACTCAAATTGATGAGATGCCAATGAATGTTGCGGACTTGCTTTCATAA
Transcript >Pro_DTO377G3_2|g6499.t1
ATGGCGGATGGAATCGACAGACGCGCCGAGGAGCGCATGGAATTCAACACCTCCAAGGAGGTGACGGTCGCGCCG
ACCTTCGAGGACATGCATTTGAAGGAAAGCCTGCTTCGTGGAGTGTACGCTTATGGATACGAATCGCCTTCGGCT
GTGCAATCCCGTGCGATTGTTCAAATCTGCAAAGGTCGCGACACGATTGCCCAGGCCCAGTCCGGTACTGGTAAA
ACTGCCACATTCGCGATCAGTACTCTGCAGATCATTGATACTGTTGTGCGCGAGACCCAAGCTCTGGTCCTGTCC
CCGACTCGTGAACTCGCAACCCAAATTCAATCCGTCATTATGGCCCTTGGTGATTACATGAACGTTCAGTGTCAC
GCTTGTATCGGAGGAACCAATGTTGGCGAAGATATCCGCAAACTCGAGTACGGCCAACACGTTGTCTCTGGAACT
CCTGGTCGTGTAGCCGATATGATTCGTCGCCGAAACCTGCGCACACGTCATATCAAGATGCTCGTTCTCGATGAG
GCTGACGAGCTCCTTAATCGCGGTTTCCGTGAGCAGATTTACGATGTTTACCGTTACCTGCCCCCCGCGACGCAG
GTCGTCGTGGTCTCAGCCACCCTCCCATACGATGTCTTGGACATGACCACCAAGTTCATGACTGACCCCGTCCGT
GTCCTGGTCAAGCGTGACGAGTTGACACTAGAGGGCATCAAGCAATACTTCATCGCCGTCGAGAAAGAGGAATGG
AAGTTCGACACACTTTGTGATCTGTACGACACCTTGACTATCACCCAGGCCGTTATCTTCTGCAACACTCGCCGA
AAGGTCGACTGGCTTGCCGACAAGATGCGTGAGGCCAATTTCACCGTCTCTAGTATGCACGGCGAGATGCCTCAG
AAAGAGCGTGATAGTATTATGCAAGACTTCCGTCAGGGTAATTCCCGTGTCCTCATTTCTACTGATGTCTGGGCC
CGTGGTATCGATGTCCAACAAGTCTCTCTTGTTATCAACTACGATCTGCCTACCAACCGTGAGAACTACATTCAC
CGTATCGGTCGATCTGGACGATTCGGCCGCAAGGGTGTGGCCATCAACTTTGTCACCACCGATGATGTCCGCATT
CTTCGCGACATCGAGTTGTACTACTCGACTCAAATTGATGAGATGCCAATGAATGTTGCGGACTTGCTTTCATAA
Gene >Pro_DTO377G3_2|g6499.t1
ATGGCGGATGGAATCGACAGACGCGCCGAGGGTATGTGGTTCTAACATTGGGACAACATGAAGCATGCTAACAGC
AACTAGAGCGCATGGAATTCAACACCTCCAAGGAGGTGACGGTCGCGCCGACCTTCGAGGACATGCATTTGAAGG
AAAGCCTGCTTCGTGGAGTGTACGCTTATGGATACGAATCGCCTTCGGCTGTGCAATCCCGTGCGATTGTTCAAA
TCTGCAAAGGTCGCGACACGATTGCCCAGGCCCAGTCCGGTACTGGTAAAACTGCCACATTCGCGATCAGTACTC
TGCAGATCATTGATACTGTTGTGCGCGAGACCCAAGGTATGTACCACTCTGTCTAATCTGATCAGATCCAGGCCT
AACCACGCTCCGGTTTGTAACAGCTCTGGTCCTGTCCCCGACTCGTGAACTCGCAACCCAAATTCAATCCGTCAT
TATGGCCCTTGGTGATTACATGAACGTTCAGTGTCACGCTTGTATCGGAGGAACCAATGTTGGCGAAGATATCCG
CAAACTCGAGTACGGCCAACACGTTGTCTCTGGAACTCCTGGTCGTGTAGCCGATATGATTCGTCGCCGAAACCT
GCGCACACGTCATATCAAGATGCTCGTTCTCGATGAGGCTGACGAGCTCCTTAATCGCGGTTTCCGTGAGCAGAT
TTACGATGTTTACCGTTACCTGCCCCCCGCGACGCAGGTCGTCGTGGTCTCAGCCACCCTCCCATACGATGTCTT
GGACATGACCACCAAGTTCATGACTGACCCCGTCCGTGTCCTGGTCAAGCGTGACGAGTTGACACTAGAGGGCAT
CAAGCAATACTTCATCGCCGTCGAGAAAGAGGAATGGAAGTTCGACACACTTTGTGATCTGTACGACACCTTGAC
TATCACCCAGGCCGTTATCTTCTGCAACACTCGCCGAAAGGTCGACTGGCTTGCCGACAAGATGCGTGAGGCCAA
TTTCACCGTCTCTAGTATGCACGGCGAGATGCCTCAGAAAGAGCGTGATAGTATTATGCAAGACTTCCGTCAGGG
TAATTCCCGTGTCCTCATTTCTACTGATGTCTGGGCCCGTGGTATCGATGTCCAACAAGTCTCTCTTGTTATCAA
CTACGATCTGCCTACCAACCGTGAGAACTACATTCACCGTATCGGTCGATCTGGACGATTCGGCCGCAAGGGTGT
GGCCATCAACTTTGTCACCACCGATGATGTCCGCATTCTTCGCGACATCGAGTTGTACTACTCGACTCAAATTGA
TGAGATGCCAATGAATGGTAAGCCACGCAGCTATAATATTTCTATTGCTATGCTAACAATGTTATTGCAGTTGCG
GACTTGCTTTCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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