Protein ID | Pro_DTO377G3_2|g6477.t1 |
Gene name | |
Location | scaffold_17:302408..305625 |
Strand | - |
Gene length (bp) | 3217 |
Transcript length (bp) | 2862 |
Coding sequence length (bp) | 2862 |
Protein length (aa) | 954 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03033 | Glyco_transf_28 | Glycosyltransferase family 28 N-terminal domain | 6.0E-17 | 109 | 272 |
PF00201 | UDPGT | UDP-glucoronosyl and UDP-glucosyl transferase | 6.0E-05 | 375 | 514 |
GO Term | Description | Terminal node |
---|---|---|
GO:0030259 | lipid glycosylation | Yes |
GO:0016758 | hexosyltransferase activity | Yes |
GO:0005975 | carbohydrate metabolic process | Yes |
GO:0008194 | UDP-glycosyltransferase activity | Yes |
GO:0071704 | organic substance metabolic process | No |
GO:0006629 | lipid metabolic process | No |
GO:0003824 | catalytic activity | No |
GO:0003674 | molecular_function | No |
GO:0016740 | transferase activity | No |
GO:0030258 | lipid modification | No |
GO:0044237 | cellular metabolic process | No |
GO:0008152 | metabolic process | No |
GO:0070085 | glycosylation | No |
GO:0044255 | cellular lipid metabolic process | No |
GO:0009987 | cellular process | No |
GO:0016757 | glycosyltransferase activity | No |
GO:0044238 | primary metabolic process | No |
GO:0008150 | biological_process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 39 | 0.45 |
Expression values
Label | Description | Expression (RPKM) | Confidence interval (low) | Confidence interval (high) |
---|---|---|---|---|
3d_25C | Three days - 25 degrees Celsius | 295.41 | 163.26 | 427.57 |
5d_25C | Five days - 25 degrees Celsius | 731.80 | 352.29 | 1111.31 |
7d_25C | Seven days - 25 degrees Celsius | 904.89 | 426.44 | 1383.35 |
10d_25C | Ten days - 25 degrees Celsius | 1669.58 | 623.93 | 2715.22 |
7d_15C | Seven days - 15 degrees Celsius | 909.10 | 385.17 | 1433.03 |
7d_30C | Seven days - 30 degrees Celsius | 745.61 | 348.28 | 1142.94 |
Differential expression
Label1 | Label2 | Q-value | Significant difference |
---|---|---|---|
3d_25C | 5d_25C | 0.000700 | yes |
3d_25C | 7d_25C | 0.000700 | yes |
3d_25C | 7d_15C | 0.000700 | yes |
3d_25C | 7d_30C | 0.001804 | yes |
3d_25C | 10d_25C | 0.000700 | yes |
5d_25C | 7d_25C | 0.528670 | no |
5d_25C | 7d_15C | 0.536742 | no |
5d_25C | 7d_30C | 0.968363 | no |
5d_25C | 10d_25C | 0.007437 | yes |
7d_25C | 7d_15C | 0.992511 | no |
7d_25C | 7d_30C | 0.587411 | no |
7d_25C | 10d_25C | 0.053684 | no |
7d_15C | 7d_30C | 0.586445 | no |
7d_15C | 10d_25C | 0.061973 | no |
7d_30C | 10d_25C | 0.008807 | yes |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g6477.t1 MATVLAPNPAEISFERMDINRSGDWASEGTKRASDDPDGVQFFEDGLNARILGDGRVDIHIDQHKPHLGGLLKHI QRADIHSERDSECAVSAERPYTNDEHFPLHLNLVIQVIGSRGDIQPFVALGKELKAHGHRVRLATHLAFRQFVLD TGLEFFNIGGDPEELMAYMVKNPGLLPGFKAIRSGDIQRRRREMKEIFNGCWKSCFEKGDGTYLHQIKEDPFSKT VDYRQRPFVADAIIANPPSLAHIHCAQRLGIPLHIIFTMPWSPTQSFPHPLANVHRRNCKPTIANFVSYNIVDMM VWEGLGDILNTLRKNTLALQPLDTMTAPSILHRLHVPHTYMWSPSLLPKPPDWADNIDVCGFGFLLSETSYTPPT EIAAFLDAGPKPIYIGFGSIVVDNANKLTKTIFEAVKNSGQRALISKGWGNLGADEVPDNILMIGNCPHDWLFGQ VSCVIHHGGAGTTAAGLALGRPTIIVPFFGDQQFWGNIVARAGAGPAPIPHKILNVQNLSSAIAKALEPSTLERA QTIALKMQEESGVRHGVNSFHRNLDPQSYRCSIVPNHPAAWHLKHTRINLSAFAATVLVRSGKISPDMLVLYRPI EYDTLLDPADPLTASAQVLFGVITSFVTGLVDAPREIVHDIVSAARSIRQPHEHFDRHAACQAVLSSPDHLSPEN NDGTETHIQNENEQLQIENEEQRDGEILEGESAQEDTTDADNETDINSIDRIRSTERKRNIQLEKAKTMSSSMTP TNPPKSTILHEAALHGSQMSKKILKIIIVVPTDLTLSMARGFHNAPKLYHDTTVTDTPQVVSLRSGFRAAGKEFR DGFYFGIKGLGTQPHHGLKHGGAKGLLKGVGKGIGGLFLKPTAGLWGLAGYPLSGIVREINDSLGRHQKCMIVMG RISQGLEEMRESTAQEREEVSRGWITIEHDLKKLKTHHHLHMSDSTHAVVLFE* |
Coding | >Pro_DTO377G3_2|g6477.t1 ATGGCAACTGTACTAGCACCAAATCCTGCAGAAATATCATTCGAGAGAATGGACATCAATCGCTCGGGTGATTGG GCGAGTGAAGGTACTAAGCGAGCATCAGATGACCCCGATGGAGTGCAATTCTTCGAGGATGGGTTGAACGCCCGT ATTCTAGGTGACGGCCGAGTGGATATCCATATCGATCAGCATAAACCGCACCTCGGAGGGCTATTAAAGCACATC CAACGCGCGGATATACATTCTGAGCGAGATTCCGAATGCGCTGTCAGCGCGGAACGGCCCTACACGAATGATGAG CATTTCCCACTGCACTTAAACCTGGTCATCCAAGTTATTGGTTCTCGAGGCGATATTCAACCATTTGTGGCACTA GGGAAAGAACTGAAAGCACACGGTCATCGAGTCAGATTGGCCACACATTTAGCTTTTCGGCAGTTTGTTCTCGAT ACCGGTCTAGAGTTCTTCAATATCGGAGGAGACCCAGAGGAGCTGATGGCTTATATGGTCAAAAATCCGGGCCTT TTACCGGGCTTCAAGGCAATACGCAGCGGAGATATCCAGAGGCGTCGCCGTGAGATGAAGGAAATCTTCAATGGA TGTTGGAAATCTTGCTTTGAAAAGGGTGATGGGACTTACCTTCACCAGATTAAGGAAGACCCATTCAGTAAGACA GTGGATTACCGACAGCGGCCCTTTGTGGCGGATGCTATTATAGCAAACCCTCCTAGCCTTGCCCATATCCATTGC GCCCAACGACTGGGTATCCCTCTCCATATCATATTCACGATGCCCTGGTCACCAACCCAGTCTTTTCCCCACCCG TTAGCGAATGTCCACCGCCGGAACTGCAAGCCAACTATCGCAAATTTCGTGTCCTACAATATCGTCGATATGATG GTATGGGAAGGATTAGGAGATATTCTGAACACACTTCGCAAAAATACCTTGGCACTCCAACCCCTGGATACAATG ACTGCCCCAAGCATACTACACCGACTACATGTGCCACATACGTATATGTGGTCCCCTTCATTACTACCTAAGCCC CCTGATTGGGCTGATAACATCGATGTATGCGGCTTTGGCTTCCTCCTCTCAGAGACCAGCTACACACCACCAACG GAAATAGCTGCATTTCTCGACGCAGGACCAAAACCAATATACATTGGTTTTGGCTCGATCGTAGTTGATAATGCG AACAAACTGACAAAAACCATATTTGAAGCAGTCAAAAATTCCGGACAGCGGGCTCTTATCTCAAAAGGCTGGGGG AATTTGGGGGCAGACGAAGTGCCGGACAATATTCTGATGATTGGAAACTGCCCTCACGATTGGCTGTTTGGGCAG GTTTCATGTGTTATCCACCATGGTGGTGCTGGCACCACAGCGGCAGGGCTCGCGCTAGGTCGACCGACAATAATT GTCCCTTTCTTTGGAGACCAGCAATTCTGGGGAAACATCGTTGCGCGTGCTGGAGCTGGGCCAGCACCAATACCA CATAAAATTTTGAACGTGCAGAATCTCTCAAGCGCAATCGCGAAAGCGCTAGAGCCGAGTACTCTAGAGAGAGCA CAGACGATCGCGTTGAAAATGCAGGAAGAGTCTGGTGTGCGCCATGGGGTGAATAGCTTTCATCGAAATCTTGAC CCCCAGTCATACAGATGCTCTATAGTCCCGAATCATCCGGCGGCTTGGCATCTCAAACATACCAGAATCAACCTC AGTGCCTTTGCAGCAACGGTTCTAGTGAGATCAGGGAAGATCAGCCCAGATATGCTCGTGCTTTACCGTCCAATT GAGTATGATACATTACTGGACCCTGCCGACCCACTTACTGCTAGTGCTCAGGTGCTCTTTGGAGTCATTACGAGC TTCGTGACTGGGCTTGTCGATGCGCCCAGAGAGATTGTGCATGATATTGTTTCTGCTGCTCGCTCAATACGCCAA CCCCATGAACATTTTGATCGCCACGCAGCATGTCAGGCAGTACTTTCTTCACCAGATCATTTATCTCCAGAGAAT AATGATGGGACTGAAACACATATTCAAAATGAGAACGAGCAATTGCAGATTGAGAATGAGGAACAGCGAGATGGT GAAATCCTAGAAGGGGAGAGTGCACAGGAAGATACTACCGATGCGGACAATGAAACCGATATCAACAGCATTGAT CGAATTCGGAGCACAGAACGCAAAAGGAATATCCAGCTCGAAAAGGCCAAGACAATGAGCAGCTCGATGACACCG ACAAATCCACCTAAATCTACTATTTTACACGAAGCTGCGTTACACGGAAGTCAAATGTCCAAGAAAATATTGAAG ATAATCATAGTGGTACCGACCGATTTGACACTGAGCATGGCCAGAGGTTTCCACAACGCACCCAAATTATATCAC GACACGACAGTAACCGACACCCCCCAGGTGGTCAGTCTTCGAAGCGGGTTCAGGGCGGCAGGAAAGGAGTTCCGA GATGGATTTTACTTCGGTATTAAGGGCCTAGGAACACAGCCGCATCATGGTCTTAAGCACGGAGGTGCTAAGGGG CTTCTCAAAGGTGTCGGAAAAGGAATCGGTGGGTTGTTTCTCAAGCCGACAGCAGGGTTATGGGGTCTAGCAGGA TATCCCTTAAGCGGGATAGTCAGAGAGATCAATGACTCGCTAGGCAGACATCAAAAATGCATGATTGTAATGGGT CGAATTTCGCAAGGACTCGAAGAGATGCGAGAATCCACGGCCCAGGAAAGGGAAGAGGTATCCAGGGGATGGATT ACTATTGAACACGACTTGAAAAAGTTGAAAACGCACCACCATTTGCATATGTCGGACTCCACTCATGCTGTGGTG TTATTTGAGTGA |
Transcript | >Pro_DTO377G3_2|g6477.t1 ATGGCAACTGTACTAGCACCAAATCCTGCAGAAATATCATTCGAGAGAATGGACATCAATCGCTCGGGTGATTGG GCGAGTGAAGGTACTAAGCGAGCATCAGATGACCCCGATGGAGTGCAATTCTTCGAGGATGGGTTGAACGCCCGT ATTCTAGGTGACGGCCGAGTGGATATCCATATCGATCAGCATAAACCGCACCTCGGAGGGCTATTAAAGCACATC CAACGCGCGGATATACATTCTGAGCGAGATTCCGAATGCGCTGTCAGCGCGGAACGGCCCTACACGAATGATGAG CATTTCCCACTGCACTTAAACCTGGTCATCCAAGTTATTGGTTCTCGAGGCGATATTCAACCATTTGTGGCACTA GGGAAAGAACTGAAAGCACACGGTCATCGAGTCAGATTGGCCACACATTTAGCTTTTCGGCAGTTTGTTCTCGAT ACCGGTCTAGAGTTCTTCAATATCGGAGGAGACCCAGAGGAGCTGATGGCTTATATGGTCAAAAATCCGGGCCTT TTACCGGGCTTCAAGGCAATACGCAGCGGAGATATCCAGAGGCGTCGCCGTGAGATGAAGGAAATCTTCAATGGA TGTTGGAAATCTTGCTTTGAAAAGGGTGATGGGACTTACCTTCACCAGATTAAGGAAGACCCATTCAGTAAGACA GTGGATTACCGACAGCGGCCCTTTGTGGCGGATGCTATTATAGCAAACCCTCCTAGCCTTGCCCATATCCATTGC GCCCAACGACTGGGTATCCCTCTCCATATCATATTCACGATGCCCTGGTCACCAACCCAGTCTTTTCCCCACCCG TTAGCGAATGTCCACCGCCGGAACTGCAAGCCAACTATCGCAAATTTCGTGTCCTACAATATCGTCGATATGATG GTATGGGAAGGATTAGGAGATATTCTGAACACACTTCGCAAAAATACCTTGGCACTCCAACCCCTGGATACAATG ACTGCCCCAAGCATACTACACCGACTACATGTGCCACATACGTATATGTGGTCCCCTTCATTACTACCTAAGCCC CCTGATTGGGCTGATAACATCGATGTATGCGGCTTTGGCTTCCTCCTCTCAGAGACCAGCTACACACCACCAACG GAAATAGCTGCATTTCTCGACGCAGGACCAAAACCAATATACATTGGTTTTGGCTCGATCGTAGTTGATAATGCG AACAAACTGACAAAAACCATATTTGAAGCAGTCAAAAATTCCGGACAGCGGGCTCTTATCTCAAAAGGCTGGGGG AATTTGGGGGCAGACGAAGTGCCGGACAATATTCTGATGATTGGAAACTGCCCTCACGATTGGCTGTTTGGGCAG GTTTCATGTGTTATCCACCATGGTGGTGCTGGCACCACAGCGGCAGGGCTCGCGCTAGGTCGACCGACAATAATT GTCCCTTTCTTTGGAGACCAGCAATTCTGGGGAAACATCGTTGCGCGTGCTGGAGCTGGGCCAGCACCAATACCA CATAAAATTTTGAACGTGCAGAATCTCTCAAGCGCAATCGCGAAAGCGCTAGAGCCGAGTACTCTAGAGAGAGCA CAGACGATCGCGTTGAAAATGCAGGAAGAGTCTGGTGTGCGCCATGGGGTGAATAGCTTTCATCGAAATCTTGAC CCCCAGTCATACAGATGCTCTATAGTCCCGAATCATCCGGCGGCTTGGCATCTCAAACATACCAGAATCAACCTC AGTGCCTTTGCAGCAACGGTTCTAGTGAGATCAGGGAAGATCAGCCCAGATATGCTCGTGCTTTACCGTCCAATT GAGTATGATACATTACTGGACCCTGCCGACCCACTTACTGCTAGTGCTCAGGTGCTCTTTGGAGTCATTACGAGC TTCGTGACTGGGCTTGTCGATGCGCCCAGAGAGATTGTGCATGATATTGTTTCTGCTGCTCGCTCAATACGCCAA CCCCATGAACATTTTGATCGCCACGCAGCATGTCAGGCAGTACTTTCTTCACCAGATCATTTATCTCCAGAGAAT AATGATGGGACTGAAACACATATTCAAAATGAGAACGAGCAATTGCAGATTGAGAATGAGGAACAGCGAGATGGT GAAATCCTAGAAGGGGAGAGTGCACAGGAAGATACTACCGATGCGGACAATGAAACCGATATCAACAGCATTGAT CGAATTCGGAGCACAGAACGCAAAAGGAATATCCAGCTCGAAAAGGCCAAGACAATGAGCAGCTCGATGACACCG ACAAATCCACCTAAATCTACTATTTTACACGAAGCTGCGTTACACGGAAGTCAAATGTCCAAGAAAATATTGAAG ATAATCATAGTGGTACCGACCGATTTGACACTGAGCATGGCCAGAGGTTTCCACAACGCACCCAAATTATATCAC GACACGACAGTAACCGACACCCCCCAGGTGGTCAGTCTTCGAAGCGGGTTCAGGGCGGCAGGAAAGGAGTTCCGA GATGGATTTTACTTCGGTATTAAGGGCCTAGGAACACAGCCGCATCATGGTCTTAAGCACGGAGGTGCTAAGGGG CTTCTCAAAGGTGTCGGAAAAGGAATCGGTGGGTTGTTTCTCAAGCCGACAGCAGGGTTATGGGGTCTAGCAGGA TATCCCTTAAGCGGGATAGTCAGAGAGATCAATGACTCGCTAGGCAGACATCAAAAATGCATGATTGTAATGGGT CGAATTTCGCAAGGACTCGAAGAGATGCGAGAATCCACGGCCCAGGAAAGGGAAGAGGTATCCAGGGGATGGATT ACTATTGAACACGACTTGAAAAAGTTGAAAACGCACCACCATTTGCATATGTCGGACTCCACTCATGCTGTGGTG TTATTTGAGTGA |
Gene | >Pro_DTO377G3_2|g6477.t1 ATGGCAACTGTACTAGCACCAAATCCTGCAGAAATATCATTCGAGAGAATGGACATCAATCGCTCGGGTGATTGG GCGAGTGAAGGTACTAAGCGAGCATCAGATGACCCCGATGGAGTGCAATTCTTCGAGGATGGGTTGAACGCCCGT ATTCTAGGTAAAAAATGTTCCGGCAATGATCGCTGACTTTGACTAACGGGATCACGTTTTGTTGTAGGTGACGGC CGAGTGGATATCCATATCGATCAGCATAAACCGCACCTCGGAGGGCTATTAAAGCACATCCAACGCGCGGATATA CATTCTGAGCGAGATTCCGAATGCGCTGTCAGCGCGGAACGGCCCTACACGAATGATGAGCATTTCCCACTGCAC TTAAACCTGGTCATCCAAGTTATTGGTTCTCGAGGCGATATTCAACCATTTGTGGCACTAGGGAAAGAACTGAAA GCACACGGTCATCGAGTCAGATTGGCCACACATTTAGCTTTTCGGCAGTTTGTTCTCGATACCGGTCTAGAGTTC TTCAATATCGGAGGAGACCCAGAGGAGCTGATGGCTTATATGGTCAAAAATCCGGGCCTTTTACCGGGCTTCAAG GCAATACGCAGCGGAGATATCCAGAGGCGTCGCCGTGAGATGAAGGAAATCTTCAATGGATGTTGGAAATCTTGC TTTGAAAAGGGTGATGGGACTTACCTTCACCAGATTAAGGAAGACCCATTCAGTAAGACAGTGGATTACCGACAG CGGCCCTTTGTGGCGGATGCTATTATAGCAAACCCTCCTAGCCTTGCCCATATCCATTGCGCCCAACGACTGGGT ATCCCTCTCCATATCATATTCACGTGAGCTGACTCTCTTATATAGTAATCTCTATGCACCTTTCGTATACTGAAC ACCTAATCAATAATAGGATGCCCTGGTCACCAACCCAGTCTTTTCCCCACCCGTTAGCGAATGTCCACCGCCGGA ACTGCAAGCCAACTATCGCAAATTTCGTGTCCTACAATATCGTCGATATGATGGTATGGGAAGGATTAGGAGATA TTCTGAACACACTTCGCAAAAATACCTTGGCACTCCAACCCCTGGATACAATGACTGCCCCAAGCATACTACACC GACTACATGTGCCACATACGTATATGTGGTTAGTAACATATTCCTGGTTGGCAAAAGTAGTTTAATATTTGAAAC AGGTCCCCTTCATTACTACCTAAGCCCCCTGATTGGGCTGATAACATCGATGTATGCGGCTTTGGCTTCCTCCTC TCAGAGACCAGCTACACACCACCAACGGAAATAGCTGCATTTCTCGACGCAGGACCAAAACCAATATACATTGGT TTTGGCTCGATCGTAGTTGATAATGCGAACAAACTGACAAAAACCATATTTGAAGCAGTCAAAAATTCCGGACAG CGGGCTCTTATCTCAAAAGGCTGGGGGAATTTGGGGGCAGACGAAGTGCCGGACAATATTCTGATGATTGGAAAC TGCCCTCACGATTGGCTGTTTGGGCAGGTTTCATGTGTTATCCACCATGGTGGTGCTGGCACCACAGCGGCAGGG CTCGCGCTAGGTCGACCGACAATAATTGTCCCTTTCTTTGGAGACCAGCAATTCTGGGGAAACATCGTTGCGCGT GCTGGAGCTGGGCCAGCACCAATACCACATAAAATTTTGAACGTGCAGAATCTCTCAAGCGCAATCGCGAAAGCG CTAGAGCCGAGTACTCTAGAGAGAGCACAGACGATCGCGTTGAAAATGCAGGAAGAGTCTGGTGTGCGCCATGGG GTGAATAGCTTTCATCGAAATCTTGACCCCCAGTCATACAGATGCTCTATAGTCCCGAATCATCCGGCGGCTTGG CATCTCAAACATACCAGAATCAACCTCAGTGCCTTTGCAGCAACGGTTCTAGTGAGATCAGGGAAGATCAGCCCA GATATGCTCGTGCTGTAAGTCTTGCTCCACATAGTCACCACAGCTGTGAGAGTTTCTTGCTGATTCGCCTACAGT TACCGTCCAATTGAGTATGATACATTACTGGACCCTGCCGACCCACTTACTGCTAGTGCTCAGGTGCTCTTTGGA GTCATTACGAGCTTCGTGACTGGGCTTGTCGATGCGCCCAGAGAGATTGTGCATGATATTGTTTCTGCTGCTCGC TCAATACGCCAACCCCATGAACATTTTGATCGCCACGCAGCATGTCAGGCAGTACTTTCTTCACCAGATCATTTA TCTCCAGAGAATAATGATGGGACTGAAACACATATTCAAAATGAGAACGAGCAATTGCAGATTGAGAATGAGGAA CAGCGAGATGGTGAAATCCTAGAAGGGGAGAGTGCACAGGAAGATACTACCGATGCGGACAATGAAACCGATATC AACAGCATTGATCGAATTCGGAGCACAGAACGCAAAAGGAATATCCAGCTCGAAAAGGCCAAGACAATGAGCAGC TCGATGACACCGACAAATCCACCTAAATCTACTATTTTACACGAAGCTGCGTTACACGGAAGTCAAATGTCCAAG AAAATATTGAAGATAATCATAGTGGTACCGACCGATTTGACACTGAGCATGGCCAGAGGTTTCCACAACGCACCC AAATTATATCACGACACGACAGTAACCGACACCCCCCAGGTGGTCAGTCTTCGAAGCGGGTTCAGGGCGGCAGGA AAGGTAGTAACAGCCATACCAGCGCCAGTCTAGGGCCAAATATTCTAACATATGTACAGGAGTTCCGAGATGGAT TTTACTTCGGTATTAAGGGCCTAGGAACACAGCCGCATCATGGTCTTAAGCACGGAGGTGCTAAGGGGCTTCTCA AAGGTGTCGGAAAAGGAATCGGTGGGTTGTTTCTCAAGCCGACAGCAGGTATGTGGAACATGCAGGCAATGTTTC TGTGATCTTATTGTTTACAAGCTAATCTTAATCAGGGTTATGGGGTCTAGCAGGATATCCCTTAAGCGGGATAGT CAGAGAGATCAATGACTCGCTAGGCAGACATCAAAAATGCATGATTGTAATGGGTCGAATTTCGCAAGGACTCGA AGAGATGCGAGAATCCACGGCCCAGGAAAGGGAAGAGGTATCCAGGGGATGGATTACTATTGAACACGACTTGAA AAAGTTGAAAACGCACCACCATTTGCATATGTCGGACTCCACTCATGCTGTGGTGTTATTTGAGTGA |