Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6474.t1
Gene name
Locationscaffold_17:286661..288296
Strand-
Gene length (bp)1635
Transcript length (bp)1533
Coding sequence length (bp)1533
Protein length (aa) 511

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00067 p450 Cytochrome P450 2.0E-43 79 488

GO

GO Term Description Terminal node
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen Yes
GO:0004497 monooxygenase activity Yes
GO:0020037 heme binding Yes
GO:0005506 iron ion binding Yes
GO:0046914 transition metal ion binding No
GO:0016491 oxidoreductase activity No
GO:0046906 tetrapyrrole binding No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0046872 metal ion binding No
GO:1901363 heterocyclic compound binding No
GO:0043169 cation binding No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 2 24 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 15.25 7.47 23.03
5d_25C Five days - 25 degrees Celsius 16.99 8.50 25.49
7d_25C Seven days - 25 degrees Celsius 20.69 10.47 30.92
10d_25C Ten days - 25 degrees Celsius 11.39 4.92 17.85
7d_15C Seven days - 15 degrees Celsius 18.11 8.64 27.58
7d_30C Seven days - 30 degrees Celsius 96.80 56.21 137.40

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.781870 no
3d_25C 7d_25C 0.310862 no
3d_25C 7d_15C 0.639312 no
3d_25C 7d_30C 0.000700 yes
3d_25C 10d_25C 0.392296 no
5d_25C 7d_25C 0.554714 no
5d_25C 7d_15C 0.882438 no
5d_25C 7d_30C 0.000700 yes
5d_25C 10d_25C 0.207685 no
7d_25C 7d_15C 0.716180 no
7d_25C 7d_30C 0.000700 yes
7d_25C 10d_25C 0.035449 yes
7d_15C 7d_30C 0.000700 yes
7d_15C 10d_25C 0.132659 no
7d_30C 10d_25C 0.000700 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6474.t1
MSGYILLTLQLAVVSLLVILWHSFQPNTWSNRVVSCIINKFLLWWYPIYSTDGSTPIPTCPYRFPDGGGSIKFLE
GENVSRQWAEKYGPVYRIWVGLTPEIILTRADEIKTVFKDSGNHHKASNLNGGWVMGDLVGDGVGLISQGHWKRV
HAVVSPPFTQKPTTYVPFVHSRISRHFSELYKQYEGGKTLRIKPAEDLKLLPFWVISDLLYGNLSPEMTEELLHI
TDLRTDVFQYAFKGGLSLFSISKIFYPAIRNKLHVFHARWANFNRKAYQYAMNRDDASACAIVGLYRAVEQGQIT
PTELMHTLDEALFANIDVTIGSFSWIPQFLAEDPGLQTELRAEISQTRSDTTPESWVKYIASNTTLLASCINESA
RLKPVTNYTYAQSMPTDRDVGGYRIPRGTFMVVDTNALNIWDDAWGSDKMTFRPRRFLEESRASFRYRFWRFGFG
PRQCIAQALADTILKVLVAYTVENYELKSAGKSAVNEEDARKRGEAWFKVAEQEIILEAI*
Coding >Pro_DTO377G3_2|g6474.t1
ATGTCAGGTTACATTCTTCTTACGCTGCAACTGGCAGTTGTATCACTCCTAGTCATTTTGTGGCACTCCTTTCAA
CCAAATACTTGGTCAAATCGAGTAGTGTCCTGCATAATCAATAAATTTTTACTCTGGTGGTATCCAATATATTCA
ACAGATGGCTCAACGCCTATTCCAACTTGTCCCTACCGATTTCCAGATGGCGGGGGGAGTATCAAGTTCCTGGAA
GGAGAGAATGTCTCTCGCCAGTGGGCCGAGAAATATGGCCCGGTGTATCGCATCTGGGTTGGACTCACGCCAGAA
ATCATTTTGACCCGCGCGGATGAGATCAAGACGGTCTTTAAAGACTCTGGTAACCACCACAAGGCTTCAAACCTA
AATGGTGGATGGGTAATGGGAGATCTAGTCGGCGATGGTGTCGGTCTGATCAGTCAAGGACACTGGAAACGAGTC
CATGCTGTAGTTTCACCACCCTTTACCCAGAAGCCCACGACATACGTTCCATTTGTCCATTCCCGTATTTCTCGC
CATTTTTCCGAGTTATACAAGCAGTATGAAGGCGGGAAAACGCTGCGAATCAAGCCCGCCGAGGATCTCAAGCTT
CTGCCCTTCTGGGTCATTAGCGACCTCTTATATGGAAACTTGTCCCCGGAGATGACAGAGGAGCTGTTGCACATT
ACCGATTTGCGCACCGATGTGTTTCAATATGCCTTCAAGGGTGGTCTGTCACTCTTTTCCATCAGCAAGATATTT
TACCCGGCTATAAGGAACAAGCTTCACGTCTTCCACGCTCGCTGGGCTAACTTCAATCGGAAGGCGTATCAATAT
GCAATGAACCGTGACGATGCCTCTGCTTGTGCTATTGTTGGCTTGTATAGGGCCGTGGAACAAGGTCAGATTACG
CCAACCGAGCTGATGCATACATTGGACGAAGCACTATTTGCCAACATCGATGTGACGATTGGCAGCTTCTCTTGG
ATCCCACAATTCCTGGCTGAGGATCCCGGATTACAGACCGAGCTTAGAGCAGAGATCTCACAGACCAGATCCGAC
ACAACTCCAGAGTCTTGGGTCAAATACATTGCCAGCAACACCACTCTGCTGGCAAGTTGTATCAATGAATCTGCG
AGGCTGAAGCCAGTCACCAACTACACCTATGCGCAATCGATGCCCACTGACCGGGATGTGGGTGGATACCGCATT
CCTCGTGGGACCTTCATGGTGGTTGACACCAATGCGCTGAATATCTGGGATGACGCGTGGGGCTCCGATAAAATG
ACCTTCCGGCCCCGGCGGTTCCTGGAGGAATCTAGGGCCAGCTTTCGGTATCGCTTTTGGCGTTTTGGCTTCGGG
CCCCGCCAGTGTATTGCGCAAGCCTTGGCAGATACGATCCTCAAGGTGCTGGTTGCGTACACCGTCGAAAATTAC
GAGTTAAAGTCCGCTGGAAAGTCTGCTGTGAATGAGGAGGACGCCCGGAAACGAGGCGAAGCGTGGTTCAAGGTT
GCCGAGCAGGAGATTATCCTGGAAGCGATATAG
Transcript >Pro_DTO377G3_2|g6474.t1
ATGTCAGGTTACATTCTTCTTACGCTGCAACTGGCAGTTGTATCACTCCTAGTCATTTTGTGGCACTCCTTTCAA
CCAAATACTTGGTCAAATCGAGTAGTGTCCTGCATAATCAATAAATTTTTACTCTGGTGGTATCCAATATATTCA
ACAGATGGCTCAACGCCTATTCCAACTTGTCCCTACCGATTTCCAGATGGCGGGGGGAGTATCAAGTTCCTGGAA
GGAGAGAATGTCTCTCGCCAGTGGGCCGAGAAATATGGCCCGGTGTATCGCATCTGGGTTGGACTCACGCCAGAA
ATCATTTTGACCCGCGCGGATGAGATCAAGACGGTCTTTAAAGACTCTGGTAACCACCACAAGGCTTCAAACCTA
AATGGTGGATGGGTAATGGGAGATCTAGTCGGCGATGGTGTCGGTCTGATCAGTCAAGGACACTGGAAACGAGTC
CATGCTGTAGTTTCACCACCCTTTACCCAGAAGCCCACGACATACGTTCCATTTGTCCATTCCCGTATTTCTCGC
CATTTTTCCGAGTTATACAAGCAGTATGAAGGCGGGAAAACGCTGCGAATCAAGCCCGCCGAGGATCTCAAGCTT
CTGCCCTTCTGGGTCATTAGCGACCTCTTATATGGAAACTTGTCCCCGGAGATGACAGAGGAGCTGTTGCACATT
ACCGATTTGCGCACCGATGTGTTTCAATATGCCTTCAAGGGTGGTCTGTCACTCTTTTCCATCAGCAAGATATTT
TACCCGGCTATAAGGAACAAGCTTCACGTCTTCCACGCTCGCTGGGCTAACTTCAATCGGAAGGCGTATCAATAT
GCAATGAACCGTGACGATGCCTCTGCTTGTGCTATTGTTGGCTTGTATAGGGCCGTGGAACAAGGTCAGATTACG
CCAACCGAGCTGATGCATACATTGGACGAAGCACTATTTGCCAACATCGATGTGACGATTGGCAGCTTCTCTTGG
ATCCCACAATTCCTGGCTGAGGATCCCGGATTACAGACCGAGCTTAGAGCAGAGATCTCACAGACCAGATCCGAC
ACAACTCCAGAGTCTTGGGTCAAATACATTGCCAGCAACACCACTCTGCTGGCAAGTTGTATCAATGAATCTGCG
AGGCTGAAGCCAGTCACCAACTACACCTATGCGCAATCGATGCCCACTGACCGGGATGTGGGTGGATACCGCATT
CCTCGTGGGACCTTCATGGTGGTTGACACCAATGCGCTGAATATCTGGGATGACGCGTGGGGCTCCGATAAAATG
ACCTTCCGGCCCCGGCGGTTCCTGGAGGAATCTAGGGCCAGCTTTCGGTATCGCTTTTGGCGTTTTGGCTTCGGG
CCCCGCCAGTGTATTGCGCAAGCCTTGGCAGATACGATCCTCAAGGTGCTGGTTGCGTACACCGTCGAAAATTAC
GAGTTAAAGTCCGCTGGAAAGTCTGCTGTGAATGAGGAGGACGCCCGGAAACGAGGCGAAGCGTGGTTCAAGGTT
GCCGAGCAGGAGATTATCCTGGAAGCGATATAG
Gene >Pro_DTO377G3_2|g6474.t1
ATGTCAGGTTACATTCTTCTTACGCTGCAACTGGCAGTTGTATCACTCCTAGTCATTTTGTGGCACTCCTTTCAA
CCAAATACTTGGTCAAATCGAGTAGTGTCCTGCATAATCAATGTCGGTAATACCCCGAAAGTACATCAACAGAAC
TCTGCTGACTGCCAACGTAGAAATTTTTACTCTGGTGGTATCCAATATATTCAACAGATGGCTCAACGCCTATTC
CAACTTGTCCCTACCGATTTCCAGATGGCGGGGGGAGTATCAAGTTCCTGGAAGGAGAGAATGTCTCTCGCCAGT
GGGCCGAGAAATATGGCCCGGTGTATCGCATCTGGGTTGGACTCACGCCAGAAATGTAAGTTTGCTCTCTTCAAG
ATGAACTGCTCAGGCTAAATGAAGTCTAGCATTTTGACCCGCGCGGATGAGATCAAGACGGTCTTTAAAGACTCT
GGTAACCACCACAAGGCTTCAAACCTAAATGGTGGATGGGTAATGGGAGATCTAGTCGGCGATGGTGTCGGTCTG
ATCAGTCAAGGACACTGGAAACGAGTCCATGCTGTAGTTTCACCACCCTTTACCCAGAAGCCCACGACATACGTT
CCATTTGTCCATTCCCGTATTTCTCGCCATTTTTCCGAGTTATACAAGCAGTATGAAGGCGGGAAAACGCTGCGA
ATCAAGCCCGCCGAGGATCTCAAGCTTCTGCCCTTCTGGGTCATTAGCGACCTCTTATATGGAAACTTGTCCCCG
GAGATGACAGAGGAGCTGTTGCACATTACCGATTTGCGCACCGATGTGTTTCAATATGCCTTCAAGGGTGGTCTG
TCACTCTTTTCCATCAGCAAGATATTTTACCCGGCTATAAGGAACAAGCTTCACGTCTTCCACGCTCGCTGGGCT
AACTTCAATCGGAAGGCGTATCAATATGCAATGAACCGTGACGATGCCTCTGCTTGTGCTATTGTTGGCTTGTAT
AGGGCCGTGGAACAAGGTCAGATTACGCCAACCGAGCTGATGCATACATTGGACGAAGCACTATTTGCCAACATC
GATGTGACGATTGGCAGCTTCTCTTGGATCCCACAATTCCTGGCTGAGGATCCCGGATTACAGACCGAGCTTAGA
GCAGAGATCTCACAGACCAGATCCGACACAACTCCAGAGTCTTGGGTCAAATACATTGCCAGCAACACCACTCTG
CTGGCAAGTTGTATCAATGAATCTGCGAGGCTGAAGCCAGTCACCAACTACACCTATGCGCAATCGATGCCCACT
GACCGGGATGTGGGTGGATACCGCATTCCTCGTGGGACCTTCATGGTGGTTGACACCAATGCGCTGAATATCTGG
GATGACGCGTGGGGCTCCGATAAAATGACCTTCCGGCCCCGGCGGTTCCTGGAGGAATCTAGGGCCAGCTTTCGG
TATCGCTTTTGGCGTTTTGGCTTCGGGCCCCGCCAGTGTATTGCGCAAGCCTTGGCAGATACGATCCTCAAGGTG
CTGGTTGCGTACACCGTCGAAAATTACGAGTTAAAGTCCGCTGGAAAGTCTGCTGTGAATGAGGAGGACGCCCGG
AAACGAGGCGAAGCGTGGTTCAAGGTTGCCGAGCAGGAGATTATCCTGGAAGCGATATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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