Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6473.t1
Gene name
Locationscaffold_17:284217..285554
Strand+
Gene length (bp)1337
Transcript length (bp)1278
Coding sequence length (bp)1278
Protein length (aa) 426

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF11991 Trp_DMAT Tryptophan dimethylallyltransferase 3.4E-94 38 387

GO

GO Term Description Terminal node
GO:0009820 alkaloid metabolic process Yes
GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups Yes
GO:0008150 biological_process No
GO:1901564 organonitrogen compound metabolic process No
GO:0008152 metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0016740 transferase activity No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6473.t1
MTVSSTVQPLKASVPAVAQMADMPHRTLSKSMTFANLDQYQYWHAVGPMLGRMLSNGNYSIHQQYEYLCLFAHII
IPKLGPFPGGRDIYKCLLGGTGSVELSQNVQKSGLTARIAFEPTSYIASTGVDPLNRHTVHATLAELRAIGSATI
DMELHQMLVSELTLTDREERLMSPGQISGTAWKTQILLALDLGQSGGITVKEYFYPALKASVTGQSVAKLCFSAI
RKVDKEGIFESPSKVIETYMQTQTQTDLYFLSCDLVDPAQTRIKLYLMELDMRLAKVEEHWTIGGKLNDEETLLG
LQMLRELWVEFGIIEGLRNEPERPSLPGDPDTIVPFIMNYEMNPGEVLPKPKFYFPLVGISELKIANVLTAFFER
YDMPEQAAVYRDNLQTYYPSKDLAVATDHQAWLSFSYTKKKGPYLTMYYH*
Coding >Pro_DTO377G3_2|g6473.t1
ATGACAGTCTCTTCCACTGTCCAGCCTCTCAAGGCCTCTGTGCCAGCGGTTGCACAAATGGCAGATATGCCTCAT
CGTACACTCAGCAAGTCGATGACCTTTGCCAATCTAGACCAATACCAATATTGGCATGCCGTCGGTCCTATGCTG
GGGAGGATGCTTTCCAACGGCAACTACAGCATCCATCAGCAGTATGAATATCTGTGTCTCTTCGCACATATCATA
ATCCCAAAGCTGGGACCATTCCCAGGCGGGAGAGACATATACAAATGTCTGCTCGGAGGCACCGGCTCCGTGGAG
CTCAGTCAGAATGTCCAGAAATCAGGCTTGACTGCACGCATTGCTTTCGAGCCCACAAGCTACATTGCTAGCACC
GGAGTCGACCCGCTCAACCGGCACACGGTGCACGCTACCCTGGCCGAATTGAGGGCTATCGGGTCTGCCACCATC
GACATGGAGCTGCATCAAATGCTCGTCTCCGAGCTGACGTTGACGGACCGCGAGGAAAGGCTTATGTCCCCGGGA
CAGATCTCCGGAACTGCGTGGAAGACGCAAATTCTGCTTGCTTTAGATTTGGGACAGTCCGGCGGCATCACGGTC
AAGGAGTATTTCTACCCAGCACTCAAAGCCTCCGTGACCGGGCAAAGCGTGGCCAAGTTGTGCTTTTCTGCTATT
CGGAAAGTGGACAAGGAGGGAATTTTCGAATCTCCGAGTAAGGTCATCGAGACCTATATGCAAACTCAAACCCAG
ACAGATCTCTACTTTTTGTCCTGTGATCTAGTCGATCCAGCGCAAACTAGGATTAAGCTTTACCTCATGGAGCTC
GACATGAGGCTGGCAAAGGTTGAGGAGCACTGGACAATTGGCGGCAAGCTCAACGACGAAGAGACTTTACTTGGG
CTGCAAATGCTGCGAGAGTTGTGGGTGGAGTTTGGGATTATTGAGGGCTTGCGCAATGAGCCGGAGCGGCCATCG
CTGCCCGGGGATCCCGACACTATTGTTCCATTCATCATGAACTACGAGATGAATCCCGGCGAGGTATTGCCCAAG
CCCAAATTCTACTTCCCCTTGGTTGGCATTTCGGAGCTGAAAATTGCCAACGTGCTCACTGCATTCTTCGAACGC
TACGATATGCCTGAGCAGGCCGCAGTCTATCGCGATAATTTGCAGACATACTACCCCAGCAAGGACTTGGCTGTC
GCAACGGATCATCAGGCTTGGCTGTCCTTTTCATACACTAAGAAGAAAGGACCGTACCTGACTATGTACTATCAC
TAG
Transcript >Pro_DTO377G3_2|g6473.t1
ATGACAGTCTCTTCCACTGTCCAGCCTCTCAAGGCCTCTGTGCCAGCGGTTGCACAAATGGCAGATATGCCTCAT
CGTACACTCAGCAAGTCGATGACCTTTGCCAATCTAGACCAATACCAATATTGGCATGCCGTCGGTCCTATGCTG
GGGAGGATGCTTTCCAACGGCAACTACAGCATCCATCAGCAGTATGAATATCTGTGTCTCTTCGCACATATCATA
ATCCCAAAGCTGGGACCATTCCCAGGCGGGAGAGACATATACAAATGTCTGCTCGGAGGCACCGGCTCCGTGGAG
CTCAGTCAGAATGTCCAGAAATCAGGCTTGACTGCACGCATTGCTTTCGAGCCCACAAGCTACATTGCTAGCACC
GGAGTCGACCCGCTCAACCGGCACACGGTGCACGCTACCCTGGCCGAATTGAGGGCTATCGGGTCTGCCACCATC
GACATGGAGCTGCATCAAATGCTCGTCTCCGAGCTGACGTTGACGGACCGCGAGGAAAGGCTTATGTCCCCGGGA
CAGATCTCCGGAACTGCGTGGAAGACGCAAATTCTGCTTGCTTTAGATTTGGGACAGTCCGGCGGCATCACGGTC
AAGGAGTATTTCTACCCAGCACTCAAAGCCTCCGTGACCGGGCAAAGCGTGGCCAAGTTGTGCTTTTCTGCTATT
CGGAAAGTGGACAAGGAGGGAATTTTCGAATCTCCGAGTAAGGTCATCGAGACCTATATGCAAACTCAAACCCAG
ACAGATCTCTACTTTTTGTCCTGTGATCTAGTCGATCCAGCGCAAACTAGGATTAAGCTTTACCTCATGGAGCTC
GACATGAGGCTGGCAAAGGTTGAGGAGCACTGGACAATTGGCGGCAAGCTCAACGACGAAGAGACTTTACTTGGG
CTGCAAATGCTGCGAGAGTTGTGGGTGGAGTTTGGGATTATTGAGGGCTTGCGCAATGAGCCGGAGCGGCCATCG
CTGCCCGGGGATCCCGACACTATTGTTCCATTCATCATGAACTACGAGATGAATCCCGGCGAGGTATTGCCCAAG
CCCAAATTCTACTTCCCCTTGGTTGGCATTTCGGAGCTGAAAATTGCCAACGTGCTCACTGCATTCTTCGAACGC
TACGATATGCCTGAGCAGGCCGCAGTCTATCGCGATAATTTGCAGACATACTACCCCAGCAAGGACTTGGCTGTC
GCAACGGATCATCAGGCTTGGCTGTCCTTTTCATACACTAAGAAGAAAGGACCGTACCTGACTATGTACTATCAC
TAG
Gene >Pro_DTO377G3_2|g6473.t1
ATGACAGTCTCTTCCACTGTCCAGCCTCTCAAGGCCTCTGTGCCAGCGGTTGCACAAATGGCAGATATGCCTCAT
CGTACACTCAGCAAGTCGATGACCTTTGCCAATCTAGACCAATACCAATATTGGCATGCCGTCGGTCCTATGCTG
GGGAGGATGCTTTCCAACGGCAACTACAGCATCCATCAGCAGTATGAATATCTGTGTCTCTTCGCACATATCATA
ATCCCAAAGCTGGGACCATTCCCAGGCGGGAGAGACATATACAAATGTCTGCTCGGAGGCACCGGCTCCGTGGAG
CTCAGTCAGAATGTCCAGAAATCAGGCTTGACTGCACGCATTGCTTTCGAGCCCACAAGCTACATTGCTAGCACC
GGAGTCGACCCGCTCAACCGGCACACGGTGCACGCTACCCTGGCCGAATTGAGGGCTATCGGGTCTGCCACCATC
GACATGGAGCTGCATCAAATGCTCGTCTCCGAGCTGACGTTGACGGACCGCGAGGAAAGGCTTATGTCCCCGGGA
CAGATCTCCGGAACTGCGTGGAAGACGCAAATTCTGCTTGCTTTAGATTTGGGACAGTCCGGCGGCATCACGGTC
AAGGAGTATTTCTACCCAGCACTCAAAGCCTCCGTGACCGGGCAAAGCGTGGCCAAGTTGTGCTTTTCTGCTATT
CGGAAAGTGGACAAGGAGGGAATTTTCGAATCTCCGAGTAAGGTCATCGAGACCTATATGCAAACTCAAACCCAG
ACAGATCTCTACTTTTTGTCCTGTGATCTAGTCGATCCAGCGCAAACTAGGATTAAGCTTTACCTCATGGAGCTC
GACATGAGGCTGGCAAAGGTTGAGGAGCACTGGACAATTGGCGGCAAGCTCAACGACGAAGAGACTTTACTTGGG
CTGCAAATGCTGCGAGAGTTGTGGGTGGAGTTTGGGATTATTGAGGGCTTGCGCAATGAGCCGGAGCGGCCATCG
CTGCCCGGGGATCCCGACACTATTGTTCCATTCATCATGAACTACGAGATGAATCCCGGCGAGGTATTGCCCAAG
CCCAAATTCTACTTCCCCTTGGTTGGCATTTCGGAGCTGAAAATTGCCAACGTGCTCACTGCATTCTTCGAACGC
TACGATATGCCTGAGCAGGCCGCAGTCTATCGCGATAATTTGCAGACATACTAGTAAGTTTATTCTGCTGCTACA
TATCGCAATGCTTCTTGCTAACCTCGTGTTATATCAGCCCCAGCAAGGACTTGGCTGTCGCAACGGATCATCAGG
CTTGGCTGTCCTTTTCATACACTAAGAAGAAAGGACCGTACCTGACTATGTACTATCACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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