Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6457.t1
Gene name
Locationscaffold_17:246390..247625
Strand-
Gene length (bp)1235
Transcript length (bp)1029
Coding sequence length (bp)1029
Protein length (aa) 343

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF09084 NMT1 NMT1/THI5 like 8.4E-79 16 238

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6457.t1
MSTDKITFLTNWHATPYHAPLYLAQARGYFKDEGLKVALLEPNDPSDVTEIIGSGKVDMGFKAMIHTLAAKARNF
PVTSIGSLLDEPFTGVVYLKSSGITEDFRSLKGKRIGYVGEFGKIQIDELTKYYGMTADDYTAVRCGMNITKAII
QGTIDAGIGLENVQMVELEEWLAGQNRPRSDVQMLRIDQLAELGCCCFCSILYIANDAFIAANPEKVAAFMRAVK
RATDDVLADPAAAYAEYIDVKPIMGTDVNRKIFERSFAYFSRDLKNVQRDWTKVTNYGKRLRILDADFVANYTNK
FLSWGLDADSTDPIGDQKRMAALQQEVAADGGFKRLEVKASA*
Coding >Pro_DTO377G3_2|g6457.t1
ATGTCTACCGACAAGATCACTTTTTTGACCAACTGGCACGCGACCCCGTACCACGCCCCCCTCTACCTCGCCCAG
GCCAGAGGCTACTTCAAGGATGAAGGTCTCAAGGTCGCTCTGCTCGAGCCTAATGACCCCTCCGATGTCACCGAG
ATCATCGGAAGCGGCAAGGTCGACATGGGCTTCAAGGCCATGATTCACACCCTGGCGGCCAAGGCCCGCAACTTC
CCCGTGACCTCCATCGGCTCCCTCCTCGACGAGCCCTTCACCGGAGTCGTGTACCTGAAGTCCAGCGGTATCACC
GAGGACTTCCGCTCGCTGAAAGGCAAGCGAATCGGATACGTTGGCGAGTTCGGCAAGATCCAAATCGACGAACTC
ACCAAGTACTACGGCATGACCGCCGACGACTACACAGCCGTGCGGTGCGGAATGAACATAACCAAAGCCATCATC
CAAGGCACAATCGACGCCGGTATCGGTCTCGAGAACGTGCAGATGGTCGAACTGGAAGAATGGCTCGCCGGCCAG
AACCGACCCCGCAGCGACGTCCAGATGCTGCGCATCGACCAGCTCGCCGAGCTGGGCTGCTGCTGCTTCTGCTCG
ATCCTGTACATCGCGAACGACGCCTTCATCGCCGCGAACCCGGAGAAGGTGGCTGCATTCATGCGCGCCGTCAAG
CGCGCCACGGACGACGTCCTCGCTGATCCTGCGGCGGCGTACGCCGAGTACATTGACGTCAAGCCGATCATGGGC
ACGGATGTCAACCGCAAGATCTTTGAGCGGTCGTTTGCTTACTTCTCGCGCGATCTGAAGAATGTTCAGCGGGAC
TGGACTAAGGTTACCAACTATGGAAAGAGACTTCGCATCTTGGACGCGGACTTCGTCGCGAACTACACCAATAAG
TTCCTTTCTTGGGGTCTGGATGCTGACTCTACTGATCCTATTGGTGATCAGAAGCGCATGGCTGCACTTCAGCAG
GAGGTTGCTGCTGATGGTGGTTTCAAGCGTCTTGAGGTTAAGGCTTCCGCTTAA
Transcript >Pro_DTO377G3_2|g6457.t1
ATGTCTACCGACAAGATCACTTTTTTGACCAACTGGCACGCGACCCCGTACCACGCCCCCCTCTACCTCGCCCAG
GCCAGAGGCTACTTCAAGGATGAAGGTCTCAAGGTCGCTCTGCTCGAGCCTAATGACCCCTCCGATGTCACCGAG
ATCATCGGAAGCGGCAAGGTCGACATGGGCTTCAAGGCCATGATTCACACCCTGGCGGCCAAGGCCCGCAACTTC
CCCGTGACCTCCATCGGCTCCCTCCTCGACGAGCCCTTCACCGGAGTCGTGTACCTGAAGTCCAGCGGTATCACC
GAGGACTTCCGCTCGCTGAAAGGCAAGCGAATCGGATACGTTGGCGAGTTCGGCAAGATCCAAATCGACGAACTC
ACCAAGTACTACGGCATGACCGCCGACGACTACACAGCCGTGCGGTGCGGAATGAACATAACCAAAGCCATCATC
CAAGGCACAATCGACGCCGGTATCGGTCTCGAGAACGTGCAGATGGTCGAACTGGAAGAATGGCTCGCCGGCCAG
AACCGACCCCGCAGCGACGTCCAGATGCTGCGCATCGACCAGCTCGCCGAGCTGGGCTGCTGCTGCTTCTGCTCG
ATCCTGTACATCGCGAACGACGCCTTCATCGCCGCGAACCCGGAGAAGGTGGCTGCATTCATGCGCGCCGTCAAG
CGCGCCACGGACGACGTCCTCGCTGATCCTGCGGCGGCGTACGCCGAGTACATTGACGTCAAGCCGATCATGGGC
ACGGATGTCAACCGCAAGATCTTTGAGCGGTCGTTTGCTTACTTCTCGCGCGATCTGAAGAATGTTCAGCGGGAC
TGGACTAAGGTTACCAACTATGGAAAGAGACTTCGCATCTTGGACGCGGACTTCGTCGCGAACTACACCAATAAG
TTCCTTTCTTGGGGTCTGGATGCTGACTCTACTGATCCTATTGGTGATCAGAAGCGCATGGCTGCACTTCAGCAG
GAGGTTGCTGCTGATGGTGGTTTCAAGCGTCTTGAGGTTAAGGCTTCCGCTTAA
Gene >Pro_DTO377G3_2|g6457.t1
ATGTCTACCGACAAGATCACTTTTTTGACCAACTGGTACGCTGACATTGTTCCAGAATCCGAGCTTCCGGGCTTC
CCGTGCTCGATCTTGTAGTTCGACTTGGCTAAGTTTTTTTTTTTTCTCAAAGGCACGCGACCCCGTACCACGCCC
CCCTCTACCTCGCCCAGGCCAGAGGCTACTTCAAGGATGAAGGTCTCAAGGTCGCTCTGCTCGAGCCTAATGACC
CCTCCGATGTCACCGAGATCATCGGAAGCGGCAAGGTCGACATGGGCTTCAAGGCCATGATTCACACCCTGGCGG
TTCGTATACATTCCCCGCAGATGATAGTCACCCCAACCATACTAATACCACGTTCAGGCCAAGGCCCGCAACTTC
CCCGTGACCTCCATCGGCTCCCTCCTCGACGAGCCCTTCACCGGAGTCGTGTACCTGAAGTCCAGCGGTATCACC
GAGGACTTCCGCTCGCTGAAAGGCAAGCGAATCGGATACGTTGGCGAGTTCGGCAAGGTATGAATTCCCTCCCTC
ACACTCAATTCCAAACAAACCCTAACAATCAACCCCAGATCCAAATCGACGAACTCACCAAGTACTACGGCATGA
CCGCCGACGACTACACAGCCGTGCGGTGCGGAATGAACATAACCAAAGCCATCATCCAAGGCACAATCGACGCCG
GTATCGGTCTCGAGAACGTGCAGATGGTCGAACTGGAAGAATGGCTCGCCGGCCAGAACCGACCCCGCAGCGACG
TCCAGATGCTGCGCATCGACCAGCTCGCCGAGCTGGGCTGCTGCTGCTTCTGCTCGATCCTGTACATCGCGAACG
ACGCCTTCATCGCCGCGAACCCGGAGAAGGTGGCTGCATTCATGCGCGCCGTCAAGCGCGCCACGGACGACGTCC
TCGCTGATCCTGCGGCGGCGTACGCCGAGTACATTGACGTCAAGCCGATCATGGGCACGGATGTCAACCGCAAGA
TCTTTGAGCGGTCGTTTGCTTACTTCTCGCGCGATCTGAAGAATGTTCAGCGGGACTGGACTAAGGTTACCAACT
ATGGAAAGAGACTTCGCATCTTGGACGCGGACTTCGTCGCGAACTACACCAATAAGTTCCTTTCTTGGGGTCTGG
ATGCTGACTCTACTGATCCTATTGGTGATCAGAAGCGCATGGCTGCACTTCAGCAGGAGGTTGCTGCTGATGGTG
GTTTCAAGCGTCTTGAGGTTAAGGCTTCCGCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail