Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6455.t1
Gene name
Locationscaffold_17:243301..244235
Strand-
Gene length (bp)934
Transcript length (bp)885
Coding sequence length (bp)885
Protein length (aa) 295

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06148 COG2 COG (conserved oligomeric Golgi) complex component, COG2 4.0E-37 29 159
PF08700 Vps51 Vps51/Vps67 4.5E-05 35 93

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 28 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6455.t1
MNRFQFGDSDGSSSDFDEDPSGLPFPEPLSRTSFLAPDFDPANFLSSLTNRHQSLEDLRQELRGLEQFLNKELLD
LVNENYQDFLSLGSALRGGEEKVEGVKVGVLSFQRDVKAIRDKVEARRQEVEELLNEKRRLRKNTDIGKDLLDYA
DRVEELEHRLMIEDKSSQEHATSDESDTESDLYGGESEDSEDYELADGTPAISLKRMERHAQKFVYLTSIAARVG
EKHPFLLAQQPRVAKIKSTVLLDLKTALEQATAGGKQGKRDARTMAVLRLYELMGEDVSAVAALKNLKL*
Coding >Pro_DTO377G3_2|g6455.t1
ATGAATCGGTTCCAATTCGGCGACTCCGACGGGTCCTCCTCCGACTTCGATGAAGACCCATCTGGTCTCCCCTTC
CCGGAACCGCTATCTCGCACCTCATTCCTCGCCCCTGACTTCGATCCGGCCAATTTCCTCTCGTCATTGACAAAC
CGACATCAAAGCCTCGAGGATCTGCGACAGGAATTGCGGGGACTGGAGCAATTCTTGAACAAGGAGCTGTTGGAT
CTTGTCAATGAGAACTACCAGGACTTTCTCTCGTTGGGCAGCGCGCTCCGCGGAGGAGAGGAGAAAGTCGAAGGT
GTAAAAGTCGGCGTACTTTCTTTCCAGCGCGACGTCAAGGCTATACGGGACAAGGTCGAGGCGCGACGCCAGGAA
GTGGAAGAGCTGTTGAACGAAAAGCGGCGACTACGAAAGAACACCGACATTGGCAAAGACCTGCTGGACTATGCA
GATCGGGTGGAGGAGTTGGAACACCGTTTGATGATTGAGGACAAGTCATCGCAAGAACATGCCACATCGGACGAA
TCAGATACAGAGTCCGATTTGTACGGCGGCGAGAGTGAAGACAGCGAGGATTATGAGCTAGCAGATGGCACACCT
GCAATTTCATTAAAGAGGATGGAACGTCATGCGCAGAAATTTGTCTATTTGACCTCGATAGCTGCCCGGGTCGGC
GAGAAGCATCCCTTCCTGCTTGCGCAGCAACCACGAGTCGCAAAGATCAAGTCTACAGTGCTCCTGGATCTCAAA
ACTGCCTTGGAGCAGGCCACGGCAGGTGGTAAACAGGGCAAACGTGACGCTAGAACAATGGCAGTTCTGCGCCTC
TACGAGCTTATGGGTGAGGACGTCAGTGCCGTTGCCGCGCTGAAGAACCTCAAGCTGTAA
Transcript >Pro_DTO377G3_2|g6455.t1
ATGAATCGGTTCCAATTCGGCGACTCCGACGGGTCCTCCTCCGACTTCGATGAAGACCCATCTGGTCTCCCCTTC
CCGGAACCGCTATCTCGCACCTCATTCCTCGCCCCTGACTTCGATCCGGCCAATTTCCTCTCGTCATTGACAAAC
CGACATCAAAGCCTCGAGGATCTGCGACAGGAATTGCGGGGACTGGAGCAATTCTTGAACAAGGAGCTGTTGGAT
CTTGTCAATGAGAACTACCAGGACTTTCTCTCGTTGGGCAGCGCGCTCCGCGGAGGAGAGGAGAAAGTCGAAGGT
GTAAAAGTCGGCGTACTTTCTTTCCAGCGCGACGTCAAGGCTATACGGGACAAGGTCGAGGCGCGACGCCAGGAA
GTGGAAGAGCTGTTGAACGAAAAGCGGCGACTACGAAAGAACACCGACATTGGCAAAGACCTGCTGGACTATGCA
GATCGGGTGGAGGAGTTGGAACACCGTTTGATGATTGAGGACAAGTCATCGCAAGAACATGCCACATCGGACGAA
TCAGATACAGAGTCCGATTTGTACGGCGGCGAGAGTGAAGACAGCGAGGATTATGAGCTAGCAGATGGCACACCT
GCAATTTCATTAAAGAGGATGGAACGTCATGCGCAGAAATTTGTCTATTTGACCTCGATAGCTGCCCGGGTCGGC
GAGAAGCATCCCTTCCTGCTTGCGCAGCAACCACGAGTCGCAAAGATCAAGTCTACAGTGCTCCTGGATCTCAAA
ACTGCCTTGGAGCAGGCCACGGCAGGTGGTAAACAGGGCAAACGTGACGCTAGAACAATGGCAGTTCTGCGCCTC
TACGAGCTTATGGGTGAGGACGTCAGTGCCGTTGCCGCGCTGAAGAACCTCAAGCTGTAA
Gene >Pro_DTO377G3_2|g6455.t1
ATGAATCGGTTCCAAGTATGAACCCATGTGACTCAAATTGGTACCTCGTCTAACCGACCTATAGTTCGGCGACTC
CGACGGGTCCTCCTCCGACTTCGATGAAGACCCATCTGGTCTCCCCTTCCCGGAACCGCTATCTCGCACCTCATT
CCTCGCCCCTGACTTCGATCCGGCCAATTTCCTCTCGTCATTGACAAACCGACATCAAAGCCTCGAGGATCTGCG
ACAGGAATTGCGGGGACTGGAGCAATTCTTGAACAAGGAGCTGTTGGATCTTGTCAATGAGAACTACCAGGACTT
TCTCTCGTTGGGCAGCGCGCTCCGCGGAGGAGAGGAGAAAGTCGAAGGTGTAAAAGTCGGCGTACTTTCTTTCCA
GCGCGACGTCAAGGCTATACGGGACAAGGTCGAGGCGCGACGCCAGGAAGTGGAAGAGCTGTTGAACGAAAAGCG
GCGACTACGAAAGAACACCGACATTGGCAAAGACCTGCTGGACTATGCAGATCGGGTGGAGGAGTTGGAACACCG
TTTGATGATTGAGGACAAGTCATCGCAAGAACATGCCACATCGGACGAATCAGATACAGAGTCCGATTTGTACGG
CGGCGAGAGTGAAGACAGCGAGGATTATGAGCTAGCAGATGGCACACCTGCAATTTCATTAAAGAGGATGGAACG
TCATGCGCAGAAATTTGTCTATTTGACCTCGATAGCTGCCCGGGTCGGCGAGAAGCATCCCTTCCTGCTTGCGCA
GCAACCACGAGTCGCAAAGATCAAGTCTACAGTGCTCCTGGATCTCAAAACTGCCTTGGAGCAGGCCACGGCAGG
TGGTAAACAGGGCAAACGTGACGCTAGAACAATGGCAGTTCTGCGCCTCTACGAGCTTATGGGTGAGGACGTCAG
TGCCGTTGCCGCGCTGAAGAACCTCAAGCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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