Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6435.t1
Gene name
Locationscaffold_17:195666..196845
Strand+
Gene length (bp)1179
Transcript length (bp)1179
Coding sequence length (bp)1179
Protein length (aa) 393

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00291 PALP Pyridoxal-phosphate dependent enzyme 1.0E-34 34 380

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 69 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6435.t1
MSLPIQLPEAFTKIPRYNILYSTPSPIHPLSSIAPPRLSPHHPLITIHAKREDHSSPLACAGNKYRKLEYIVPDI
LSQTPLHHSHENNPTPPGPQQGGAATTLVTEGAIQSNHTVQVVALARKLGLKAVILLHRGTGGGLAAASDKEAFQ
HSGNVQINHLLGADVRVCEEGDPLAHDATPLLDELRASGQNPYWIPGGASLHPLGGLGYARAAFEIAAQEEEMGL
GGSGRFDYIFVACGSGSTVGGLVAGFKLLDKIRGLDVSRKVVGILNSPTKPRAYHEKRVLNFARRAGELIGLDGE
RDIGIEDVRLDDRFVGTAYGVLDDKSKETLENMARMEGMVLDPVYTAKVARGMMHWVDEGEVVDSAKPLEQVNIL
FIHTGGQAALGAYVDVK*
Coding >Pro_DTO377G3_2|g6435.t1
ATGTCTCTCCCGATACAGCTGCCAGAGGCGTTCACCAAAATCCCACGCTATAATATTTTATACTCTACTCCCTCT
CCCATCCACCCCTTATCCTCAATTGCACCCCCAAGACTCTCCCCGCACCACCCCCTCATCACCATCCACGCCAAA
CGAGAAGACCACTCCTCCCCACTAGCCTGCGCAGGCAACAAATATCGCAAGCTAGAATACATAGTCCCAGACATT
CTATCTCAAACACCCCTCCATCACAGCCATGAGAACAACCCAACACCCCCAGGCCCGCAGCAAGGCGGTGCAGCA
ACAACCCTCGTAACAGAGGGCGCAATCCAAAGCAACCACACTGTGCAAGTTGTCGCTCTCGCACGGAAACTCGGC
CTGAAGGCTGTAATTCTTCTGCACCGCGGCACAGGCGGCGGACTTGCAGCAGCCAGCGACAAGGAAGCCTTCCAA
CACAGCGGAAACGTGCAAATCAATCACCTTCTCGGTGCCGACGTTCGCGTCTGCGAAGAAGGGGATCCGCTAGCG
CATGATGCGACGCCTCTTCTCGATGAGTTGAGGGCGTCCGGACAGAATCCGTATTGGATCCCTGGTGGCGCGAGC
TTGCATCCGCTTGGTGGGCTGGGGTATGCGCGCGCGGCCTTTGAGATTGCTGCACAGGAGGAGGAGATGGGGCTT
GGAGGTTCGGGGAGGTTTGATTACATCTTTGTTGCGTGTGGAAGTGGGAGTACGGTTGGTGGGTTGGTGGCTGGG
TTTAAGCTGCTAGACAAGATAAGGGGATTAGATGTGTCGAGGAAGGTTGTCGGGATTCTTAATTCGCCAACTAAG
CCGCGCGCATATCATGAAAAGCGCGTGCTTAATTTTGCGCGGAGGGCGGGAGAGTTGATTGGGCTTGATGGGGAG
CGGGATATTGGGATTGAGGATGTGCGGCTTGATGATCGCTTTGTTGGGACTGCATACGGCGTGCTCGATGATAAG
AGTAAAGAGACTCTAGAGAATATGGCACGGATGGAGGGTATGGTGCTCGATCCTGTTTATACAGCCAAGGTTGCG
AGAGGCATGATGCATTGGGTGGACGAGGGAGAAGTTGTAGATTCTGCTAAACCCTTAGAGCAGGTCAATATATTG
TTCATTCATACAGGTGGACAGGCTGCTCTAGGGGCTTATGTGGATGTTAAATAA
Transcript >Pro_DTO377G3_2|g6435.t1
ATGTCTCTCCCGATACAGCTGCCAGAGGCGTTCACCAAAATCCCACGCTATAATATTTTATACTCTACTCCCTCT
CCCATCCACCCCTTATCCTCAATTGCACCCCCAAGACTCTCCCCGCACCACCCCCTCATCACCATCCACGCCAAA
CGAGAAGACCACTCCTCCCCACTAGCCTGCGCAGGCAACAAATATCGCAAGCTAGAATACATAGTCCCAGACATT
CTATCTCAAACACCCCTCCATCACAGCCATGAGAACAACCCAACACCCCCAGGCCCGCAGCAAGGCGGTGCAGCA
ACAACCCTCGTAACAGAGGGCGCAATCCAAAGCAACCACACTGTGCAAGTTGTCGCTCTCGCACGGAAACTCGGC
CTGAAGGCTGTAATTCTTCTGCACCGCGGCACAGGCGGCGGACTTGCAGCAGCCAGCGACAAGGAAGCCTTCCAA
CACAGCGGAAACGTGCAAATCAATCACCTTCTCGGTGCCGACGTTCGCGTCTGCGAAGAAGGGGATCCGCTAGCG
CATGATGCGACGCCTCTTCTCGATGAGTTGAGGGCGTCCGGACAGAATCCGTATTGGATCCCTGGTGGCGCGAGC
TTGCATCCGCTTGGTGGGCTGGGGTATGCGCGCGCGGCCTTTGAGATTGCTGCACAGGAGGAGGAGATGGGGCTT
GGAGGTTCGGGGAGGTTTGATTACATCTTTGTTGCGTGTGGAAGTGGGAGTACGGTTGGTGGGTTGGTGGCTGGG
TTTAAGCTGCTAGACAAGATAAGGGGATTAGATGTGTCGAGGAAGGTTGTCGGGATTCTTAATTCGCCAACTAAG
CCGCGCGCATATCATGAAAAGCGCGTGCTTAATTTTGCGCGGAGGGCGGGAGAGTTGATTGGGCTTGATGGGGAG
CGGGATATTGGGATTGAGGATGTGCGGCTTGATGATCGCTTTGTTGGGACTGCATACGGCGTGCTCGATGATAAG
AGTAAAGAGACTCTAGAGAATATGGCACGGATGGAGGGTATGGTGCTCGATCCTGTTTATACAGCCAAGGTTGCG
AGAGGCATGATGCATTGGGTGGACGAGGGAGAAGTTGTAGATTCTGCTAAACCCTTAGAGCAGGTCAATATATTG
TTCATTCATACAGGTGGACAGGCTGCTCTAGGGGCTTATGTGGATGTTAAATAA
Gene >Pro_DTO377G3_2|g6435.t1
ATGTCTCTCCCGATACAGCTGCCAGAGGCGTTCACCAAAATCCCACGCTATAATATTTTATACTCTACTCCCTCT
CCCATCCACCCCTTATCCTCAATTGCACCCCCAAGACTCTCCCCGCACCACCCCCTCATCACCATCCACGCCAAA
CGAGAAGACCACTCCTCCCCACTAGCCTGCGCAGGCAACAAATATCGCAAGCTAGAATACATAGTCCCAGACATT
CTATCTCAAACACCCCTCCATCACAGCCATGAGAACAACCCAACACCCCCAGGCCCGCAGCAAGGCGGTGCAGCA
ACAACCCTCGTAACAGAGGGCGCAATCCAAAGCAACCACACTGTGCAAGTTGTCGCTCTCGCACGGAAACTCGGC
CTGAAGGCTGTAATTCTTCTGCACCGCGGCACAGGCGGCGGACTTGCAGCAGCCAGCGACAAGGAAGCCTTCCAA
CACAGCGGAAACGTGCAAATCAATCACCTTCTCGGTGCCGACGTTCGCGTCTGCGAAGAAGGGGATCCGCTAGCG
CATGATGCGACGCCTCTTCTCGATGAGTTGAGGGCGTCCGGACAGAATCCGTATTGGATCCCTGGTGGCGCGAGC
TTGCATCCGCTTGGTGGGCTGGGGTATGCGCGCGCGGCCTTTGAGATTGCTGCACAGGAGGAGGAGATGGGGCTT
GGAGGTTCGGGGAGGTTTGATTACATCTTTGTTGCGTGTGGAAGTGGGAGTACGGTTGGTGGGTTGGTGGCTGGG
TTTAAGCTGCTAGACAAGATAAGGGGATTAGATGTGTCGAGGAAGGTTGTCGGGATTCTTAATTCGCCAACTAAG
CCGCGCGCATATCATGAAAAGCGCGTGCTTAATTTTGCGCGGAGGGCGGGAGAGTTGATTGGGCTTGATGGGGAG
CGGGATATTGGGATTGAGGATGTGCGGCTTGATGATCGCTTTGTTGGGACTGCATACGGCGTGCTCGATGATAAG
AGTAAAGAGACTCTAGAGAATATGGCACGGATGGAGGGTATGGTGCTCGATCCTGTTTATACAGCCAAGGTTGCG
AGAGGCATGATGCATTGGGTGGACGAGGGAGAAGTTGTAGATTCTGCTAAACCCTTAGAGCAGGTCAATATATTG
TTCATTCATACAGGTGGACAGGCTGCTCTAGGGGCTTATGTGGATGTTAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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