Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g6422.t1
Gene name
Location	scaffold_17:151070..153638
Strand	+
Gene length (bp)	2568
Transcript length (bp)	2460
Coding sequence length (bp)	2460
Protein length (aa)	820

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF16203	ERCC3_RAD25_C	ERCC3/RAD25/XPB C-terminal helicase	8.5E-127	510	749
PF13625	Helicase_C_3	Helicase conserved C-terminal domain	8.5E-37	89	212
PF04851	ResIII	Type III restriction enzyme, res subunit	1.0E-15	329	484
PF00271	Helicase_C	Helicase conserved C-terminal domain	4.5E-13	559	660
PF00176	SNF2-rel_dom	SNF2-related domain	5.6E-11	346	493

GO

GO Term	Description	Terminal node
GO:0140658	ATP-dependent chromatin remodeler activity	Yes
GO:0016787	hydrolase activity	Yes
GO:0005524	ATP binding	Yes
GO:0003677	DNA binding	Yes
GO:0000166	nucleotide binding	No
GO:0032553	ribonucleotide binding	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0043167	ion binding	No
GO:0008094	ATP-dependent activity, acting on DNA	No
GO:0017076	purine nucleotide binding	No
GO:0097367	carbohydrate derivative binding	No
GO:0140657	ATP-dependent activity	No
GO:0030554	adenyl nucleotide binding	No
GO:0003676	nucleic acid binding	No
GO:0003824	catalytic activity	No
GO:0005488	binding	No
GO:0036094	small molecule binding	No
GO:0003674	molecular_function	No
GO:0097159	organic cyclic compound binding	No
GO:0032555	purine ribonucleotide binding	No
GO:1901363	heterocyclic compound binding	No
GO:0043168	anion binding	No
GO:0140097	catalytic activity, acting on DNA	No
GO:0140640	catalytic activity, acting on a nucleic acid	No
GO:1901265	nucleoside phosphate binding	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g6422.t1 MPPKRKAADTGRSSGASKRATPVPDISSDDDYSDQEELPDETNLKAVVNKFSLEAFSKKNHAEKTDPRFGYKDLS SLPLKRDHYNRPLWIEPLKGTITLESFSPLAPQAQDFLTTIAEPLSRPTHLHEYRLTGHSLYAAVSVGLKPQDIV EFLDRLSKTPLPESIRTFIIEFTKSYGKIKMVLRHNRYYVETTDPEMLQRLLKDEVIGPQRMDNTEGIIERAAPK MGGLVIPGTKDAAGVRETTQQEAAAAVARDGTEEGGAVNYGIDDIGEDDTEEATTYSFEIPAAGVEVVKARCQSI GCPALEEYDFQGDTVNPNLDMDLKPAARIRSYQEKSLSKMFGNGRAKSGIIVLPCGAGKTLVGITAAATIKKGTI VLCTSSMSVVQWRNEFLRWTTIDPGDIAIFTSDHKEKFKRSTGIIVSTYSMVSQTRARSYDAQKMMDWLQSREWG MMILDEVHVVPASMFRKVTSAIAAQSKLGLTATLLREDDKIKDLNFLIGPKLYEANWMELAAQGHIAKVQCAEVW CPMTTEFYSEYLRESSRKQALLYIMNPRKFQACQFLIDFHEKRGDKIIVFSDNVYALERYALKLNKAYIYGGTPQ NERMRILENFQHNEQVNTIFLSKIGDTSLDLPEATCLIQISSHYGSRRQEAQRLGRILRAKRRNDEGFNAFFYSL VSKDTNEMVYSAKRQAFLIDQGYAFKVITHLQGIDSYEGLSYSTPAERRELLQEVMLQNESSADVEQVNDDLFSM RSGKRVTSKKGGAKRSAATLSGLAGGDDMAYIEYNKSRNKQLKDKGHHPLFKKMERDRQRRKKERENEE*
Coding	>Pro_DTO377G3_2\|g6422.t1 ATGCCTCCCAAACGCAAAGCAGCCGACACTGGTCGGTCTAGCGGTGCTTCAAAGCGGGCTACGCCGGTCCCCGAT ATTTCCAGCGACGATGACTACTCGGACCAGGAAGAGTTGCCAGATGAAACCAACTTGAAAGCGGTCGTCAACAAG TTCTCTCTCGAGGCGTTCAGCAAGAAGAATCATGCGGAGAAGACGGACCCCCGATTTGGATACAAGGATCTTTCT TCGCTCCCGCTGAAGCGCGACCACTACAACCGGCCGTTATGGATCGAGCCTTTGAAAGGCACAATCACACTCGAG AGTTTCTCCCCGCTGGCACCCCAGGCGCAAGATTTCCTGACCACCATTGCGGAACCGCTTTCCCGTCCGACCCAT CTCCACGAATATCGGTTGACCGGACACAGTTTGTATGCCGCGGTCTCGGTCGGTCTCAAACCGCAGGATATTGTT GAGTTCTTGGACCGCCTGTCGAAAACACCGCTGCCCGAAAGCATTCGGACGTTCATCATCGAGTTCACAAAGTCC TACGGAAAGATCAAGATGGTGTTGAGGCATAATCGATACTATGTGGAAACGACAGATCCTGAAATGCTTCAGCGG TTGCTGAAAGATGAAGTGATCGGTCCCCAGAGAATGGATAATACCGAAGGAATTATCGAACGGGCTGCTCCGAAA ATGGGTGGTCTTGTCATTCCTGGAACGAAAGATGCAGCTGGTGTACGAGAGACCACTCAACAGGAGGCTGCCGCT GCCGTAGCTAGAGATGGGACAGAAGAAGGAGGGGCCGTGAACTATGGCATTGACGACATTGGTGAAGATGATACA GAAGAAGCAACCACATACAGTTTCGAAATCCCCGCTGCTGGTGTCGAAGTGGTCAAGGCCCGCTGCCAATCGATC GGATGTCCTGCCCTGGAAGAGTACGATTTCCAAGGAGACACAGTCAACCCTAATCTGGATATGGATTTGAAACCC GCGGCGCGGATTCGGTCTTACCAGGAGAAGAGTTTAAGTAAAATGTTCGGTAACGGACGAGCCAAGAGTGGTATC ATTGTGCTTCCTTGTGGTGCCGGTAAAACCCTTGTGGGTATCACTGCGGCGGCGACCATCAAGAAAGGCACTATC GTCCTCTGCACTAGTTCCATGTCTGTGGTTCAGTGGCGAAACGAGTTCTTGCGGTGGACAACCATCGACCCTGGT GATATTGCCATTTTCACGTCGGACCATAAAGAAAAATTCAAGCGATCAACTGGTATTATTGTGTCCACATACTCA ATGGTGTCACAGACTCGTGCCCGGTCCTATGATGCCCAGAAGATGATGGACTGGCTTCAATCGAGAGAATGGGGT ATGATGATTCTTGATGAGGTGCACGTCGTGCCGGCATCGATGTTCCGAAAGGTCACATCTGCAATTGCCGCACAG AGTAAGCTTGGTCTCACTGCAACACTACTACGTGAGGATGACAAGATCAAGGATTTGAATTTCTTGATCGGACCG AAGCTCTACGAAGCAAACTGGATGGAACTGGCTGCACAGGGCCACATCGCCAAGGTCCAATGTGCCGAGGTGTGG TGCCCGATGACAACTGAGTTCTATTCTGAGTATCTGCGGGAAAGCTCAAGGAAACAGGCTCTACTATACATCATG AACCCTCGCAAGTTCCAAGCGTGTCAGTTCCTGATCGATTTCCACGAGAAGCGCGGCGATAAGATCATCGTATTC TCTGACAATGTCTACGCTCTCGAGCGATATGCACTCAAGCTGAACAAGGCTTATATCTATGGCGGAACTCCTCAA AATGAGCGCATGCGTATTCTAGAGAACTTCCAACACAATGAGCAGGTCAACACCATCTTCTTGTCGAAGATTGGT GATACCTCCCTCGATCTACCCGAGGCCACTTGTCTGATCCAAATTTCGTCTCATTACGGTTCGCGTCGTCAGGAG GCACAGCGCCTGGGACGAATTCTGCGAGCCAAGCGCCGAAACGACGAGGGCTTCAATGCGTTCTTCTACTCGCTC GTGTCCAAGGACACTAATGAGATGGTCTATTCGGCCAAACGCCAGGCATTCCTAATCGATCAGGGTTATGCTTTC AAGGTCATCACCCATCTCCAAGGCATAGACAGCTATGAAGGACTCTCGTACTCGACGCCAGCGGAACGCCGCGAG CTCCTGCAAGAAGTCATGCTGCAGAACGAGTCATCCGCCGACGTCGAACAGGTCAATGATGATCTGTTCTCGATG CGCTCCGGCAAGCGAGTGACATCTAAGAAAGGCGGTGCTAAACGCAGCGCTGCCACTCTTAGTGGTCTGGCTGGT GGTGATGATATGGCCTATATCGAGTATAACAAGAGCAGGAACAAGCAGCTCAAGGATAAGGGACATCACCCGCTG TTCAAGAAGATGGAACGAGACCGACAACGCCGCAAGAAGGAGAGGGAGAACGAAGAATAA
Transcript	>Pro_DTO377G3_2\|g6422.t1 ATGCCTCCCAAACGCAAAGCAGCCGACACTGGTCGGTCTAGCGGTGCTTCAAAGCGGGCTACGCCGGTCCCCGAT ATTTCCAGCGACGATGACTACTCGGACCAGGAAGAGTTGCCAGATGAAACCAACTTGAAAGCGGTCGTCAACAAG TTCTCTCTCGAGGCGTTCAGCAAGAAGAATCATGCGGAGAAGACGGACCCCCGATTTGGATACAAGGATCTTTCT TCGCTCCCGCTGAAGCGCGACCACTACAACCGGCCGTTATGGATCGAGCCTTTGAAAGGCACAATCACACTCGAG AGTTTCTCCCCGCTGGCACCCCAGGCGCAAGATTTCCTGACCACCATTGCGGAACCGCTTTCCCGTCCGACCCAT CTCCACGAATATCGGTTGACCGGACACAGTTTGTATGCCGCGGTCTCGGTCGGTCTCAAACCGCAGGATATTGTT GAGTTCTTGGACCGCCTGTCGAAAACACCGCTGCCCGAAAGCATTCGGACGTTCATCATCGAGTTCACAAAGTCC TACGGAAAGATCAAGATGGTGTTGAGGCATAATCGATACTATGTGGAAACGACAGATCCTGAAATGCTTCAGCGG TTGCTGAAAGATGAAGTGATCGGTCCCCAGAGAATGGATAATACCGAAGGAATTATCGAACGGGCTGCTCCGAAA ATGGGTGGTCTTGTCATTCCTGGAACGAAAGATGCAGCTGGTGTACGAGAGACCACTCAACAGGAGGCTGCCGCT GCCGTAGCTAGAGATGGGACAGAAGAAGGAGGGGCCGTGAACTATGGCATTGACGACATTGGTGAAGATGATACA GAAGAAGCAACCACATACAGTTTCGAAATCCCCGCTGCTGGTGTCGAAGTGGTCAAGGCCCGCTGCCAATCGATC GGATGTCCTGCCCTGGAAGAGTACGATTTCCAAGGAGACACAGTCAACCCTAATCTGGATATGGATTTGAAACCC GCGGCGCGGATTCGGTCTTACCAGGAGAAGAGTTTAAGTAAAATGTTCGGTAACGGACGAGCCAAGAGTGGTATC ATTGTGCTTCCTTGTGGTGCCGGTAAAACCCTTGTGGGTATCACTGCGGCGGCGACCATCAAGAAAGGCACTATC GTCCTCTGCACTAGTTCCATGTCTGTGGTTCAGTGGCGAAACGAGTTCTTGCGGTGGACAACCATCGACCCTGGT GATATTGCCATTTTCACGTCGGACCATAAAGAAAAATTCAAGCGATCAACTGGTATTATTGTGTCCACATACTCA ATGGTGTCACAGACTCGTGCCCGGTCCTATGATGCCCAGAAGATGATGGACTGGCTTCAATCGAGAGAATGGGGT ATGATGATTCTTGATGAGGTGCACGTCGTGCCGGCATCGATGTTCCGAAAGGTCACATCTGCAATTGCCGCACAG AGTAAGCTTGGTCTCACTGCAACACTACTACGTGAGGATGACAAGATCAAGGATTTGAATTTCTTGATCGGACCG AAGCTCTACGAAGCAAACTGGATGGAACTGGCTGCACAGGGCCACATCGCCAAGGTCCAATGTGCCGAGGTGTGG TGCCCGATGACAACTGAGTTCTATTCTGAGTATCTGCGGGAAAGCTCAAGGAAACAGGCTCTACTATACATCATG AACCCTCGCAAGTTCCAAGCGTGTCAGTTCCTGATCGATTTCCACGAGAAGCGCGGCGATAAGATCATCGTATTC TCTGACAATGTCTACGCTCTCGAGCGATATGCACTCAAGCTGAACAAGGCTTATATCTATGGCGGAACTCCTCAA AATGAGCGCATGCGTATTCTAGAGAACTTCCAACACAATGAGCAGGTCAACACCATCTTCTTGTCGAAGATTGGT GATACCTCCCTCGATCTACCCGAGGCCACTTGTCTGATCCAAATTTCGTCTCATTACGGTTCGCGTCGTCAGGAG GCACAGCGCCTGGGACGAATTCTGCGAGCCAAGCGCCGAAACGACGAGGGCTTCAATGCGTTCTTCTACTCGCTC GTGTCCAAGGACACTAATGAGATGGTCTATTCGGCCAAACGCCAGGCATTCCTAATCGATCAGGGTTATGCTTTC AAGGTCATCACCCATCTCCAAGGCATAGACAGCTATGAAGGACTCTCGTACTCGACGCCAGCGGAACGCCGCGAG CTCCTGCAAGAAGTCATGCTGCAGAACGAGTCATCCGCCGACGTCGAACAGGTCAATGATGATCTGTTCTCGATG CGCTCCGGCAAGCGAGTGACATCTAAGAAAGGCGGTGCTAAACGCAGCGCTGCCACTCTTAGTGGTCTGGCTGGT GGTGATGATATGGCCTATATCGAGTATAACAAGAGCAGGAACAAGCAGCTCAAGGATAAGGGACATCACCCGCTG TTCAAGAAGATGGAACGAGACCGACAACGCCGCAAGAAGGAGAGGGAGAACGAAGAATAA
Gene	>Pro_DTO377G3_2\|g6422.t1 ATGCCTCCCAAACGCAAAGCAGCCGACAGTAAGTCCTGGTACACATTTCCGAAGTATTGATGGCTGATTATATCC AGCTGGTCGGTCTAGCGGTGCTTCAAAGCGGGCTACGCCGGTCCCCGATATTTCCAGCGACGATGACTACTCGGA CCAGGAAGAGTTGCCAGATGAAACCAACTTGAAAGGTACAGTGTGGCAGTCTGCTCACCTGAAGTGAACCAGAGA CTAAAATTTGACCATAAAGCGGTCGTCAACAAGTTCTCTCTCGAGGCGTTCAGCAAGAAGAATCATGCGGAGAAG ACGGACCCCCGATTTGGATACAAGGATCTTTCTTCGCTCCCGCTGAAGCGCGACCACTACAACCGGCCGTTATGG ATCGAGCCTTTGAAAGGCACAATCACACTCGAGAGTTTCTCCCCGCTGGCACCCCAGGCGCAAGATTTCCTGACC ACCATTGCGGAACCGCTTTCCCGTCCGACCCATCTCCACGAATATCGGTTGACCGGACACAGTTTGTATGCCGCG GTCTCGGTCGGTCTCAAACCGCAGGATATTGTTGAGTTCTTGGACCGCCTGTCGAAAACACCGCTGCCCGAAAGC ATTCGGACGTTCATCATCGAGTTCACAAAGTCCTACGGAAAGATCAAGATGGTGTTGAGGCATAATCGATACTAT GTGGAAACGACAGATCCTGAAATGCTTCAGCGGTTGCTGAAAGATGAAGTGATCGGTCCCCAGAGAATGGATAAT ACCGAAGGAATTATCGAACGGGCTGCTCCGAAAATGGGTGGTCTTGTCATTCCTGGAACGAAAGATGCAGCTGGT GTACGAGAGACCACTCAACAGGAGGCTGCCGCTGCCGTAGCTAGAGATGGGACAGAAGAAGGAGGGGCCGTGAAC TATGGCATTGACGACATTGGTGAAGATGATACAGAAGAAGCAACCACATACAGTTTCGAAATCCCCGCTGCTGGT GTCGAAGTGGTCAAGGCCCGCTGCCAATCGATCGGATGTCCTGCCCTGGAAGAGTACGATTTCCAAGGAGACACA GTCAACCCTAATCTGGATATGGATTTGAAACCCGCGGCGCGGATTCGGTCTTACCAGGAGAAGAGTTTAAGTAAA ATGTTCGGTAACGGACGAGCCAAGAGTGGTATCATTGTGCTTCCTTGTGGTGCCGGTAAAACCCTTGTGGGTATC ACTGCGGCGGCGACCATCAAGAAAGGCACTATCGTCCTCTGCACTAGTTCCATGTCTGTGGTTCAGTGGCGAAAC GAGTTCTTGCGGTGGACAACCATCGACCCTGGTGATATTGCCATTTTCACGTCGGACCATAAAGAAAAATTCAAG CGATCAACTGGTATTATTGTGTCCACATACTCAATGGTGTCACAGACTCGTGCCCGGTCCTATGATGCCCAGAAG ATGATGGACTGGCTTCAATCGAGAGAATGGGGTATGATGATTCTTGATGAGGTGCACGTCGTGCCGGCATCGATG TTCCGAAAGGTCACATCTGCAATTGCCGCACAGAGTAAGCTTGGTCTCACTGCAACACTACTACGTGAGGATGAC AAGATCAAGGATTTGAATTTCTTGATCGGACCGAAGCTCTACGAAGCAAACTGGATGGAACTGGCTGCACAGGGC CACATCGCCAAGGTCCAATGTGCCGAGGTGTGGTGCCCGATGACAACTGAGTTCTATTCTGAGTATCTGCGGGAA AGCTCAAGGAAACAGGCTCTACTATACATCATGAACCCTCGCAAGTTCCAAGCGTGTCAGTTCCTGATCGATTTC CACGAGAAGCGCGGCGATAAGATCATCGTATTCTCTGACAATGTCTACGCTCTCGAGCGATATGCACTCAAGCTG AACAAGGCTTATATCTATGGCGGAACTCCTCAAAATGAGCGCATGCGTATTCTAGAGAACTTCCAACACAATGAG CAGGTCAACACCATCTTCTTGTCGAAGATTGGTGATACCTCCCTCGATCTACCCGAGGCCACTTGTCTGATCCAA ATTTCGTCTCATTACGGTTCGCGTCGTCAGGAGGCACAGCGCCTGGGACGAATTCTGCGAGCCAAGCGCCGAAAC GACGAGGGCTTCAATGCGTTCTTCTACTCGCTCGTGTCCAAGGACACTAATGAGATGGTCTATTCGGCCAAACGC CAGGCATTCCTAATCGATCAGGGTTATGCTTTCAAGGTCATCACCCATCTCCAAGGCATAGACAGCTATGAAGGA CTCTCGTACTCGACGCCAGCGGAACGCCGCGAGCTCCTGCAAGAAGTCATGCTGCAGAACGAGTCATCCGCCGAC GTCGAACAGGTCAATGATGATCTGTTCTCGATGCGCTCCGGCAAGCGAGTGACATCTAAGAAAGGCGGTGCTAAA CGCAGCGCTGCCACTCTTAGTGGTCTGGCTGGTGGTGATGATATGGCCTATATCGAGTATAACAAGAGCAGGAAC AAGCAGCTCAAGGATAAGGGACATCACCCGCTGTTCAAGAAGATGGAACGAGACCGACAACGCCGCAAGAAGGAG AGGGAGAACGAAGAATAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences