Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6409.t1
Gene name
Locationscaffold_17:123597..124231
Strand-
Gene length (bp)634
Transcript length (bp)588
Coding sequence length (bp)588
Protein length (aa) 196

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF06094 GGACT Gamma-glutamyl cyclotransferase, AIG2-like 9.9E-17 6 175

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6409.t1
MGDHVLFFYGTLMAPQILHRVIHGQANPEPWQKAMLRFQPAILQGYRRHRVQNADYPGIVAVPETETETNLSAPK
TSAGTSVVGTLVSGLTDGDVHRLDRFEGSEYEKKRVTVRTLQAVVGGDHVNSSEGAAENQLREMLNATTGAEVAA
EGEEVLAMTYVYTAGKDMLEDSEWDFESFKRDKMAWWVQADESEW*
Coding >Pro_DTO377G3_2|g6409.t1
ATGGGCGACCACGTCCTCTTCTTCTACGGAACCCTAATGGCGCCCCAAATCCTCCACAGAGTAATCCACGGCCAG
GCGAACCCAGAGCCCTGGCAAAAAGCCATGCTCCGCTTCCAACCCGCCATTCTACAAGGGTACCGACGGCATCGT
GTGCAGAACGCCGATTACCCCGGGATCGTGGCGGTGCCAGAGACAGAAACCGAGACCAATTTATCTGCACCGAAA
ACCAGCGCTGGGACGTCCGTCGTAGGAACACTCGTGTCGGGACTAACAGACGGCGACGTTCACCGACTGGACAGA
TTTGAGGGATCGGAGTATGAGAAGAAACGGGTTACTGTGCGCACGCTGCAGGCTGTGGTGGGTGGTGACCACGTT
AATTCTAGCGAGGGTGCTGCTGAGAACCAGCTGCGCGAGATGCTCAATGCGACGACCGGCGCTGAGGTTGCGGCT
GAGGGGGAGGAAGTTTTGGCTATGACTTATGTTTATACTGCTGGGAAGGATATGCTTGAGGATTCGGAGTGGGAT
TTTGAGTCGTTTAAGAGGGATAAAATGGCGTGGTGGGTTCAGGCGGATGAGAGTGAGTGGTAG
Transcript >Pro_DTO377G3_2|g6409.t1
ATGGGCGACCACGTCCTCTTCTTCTACGGAACCCTAATGGCGCCCCAAATCCTCCACAGAGTAATCCACGGCCAG
GCGAACCCAGAGCCCTGGCAAAAAGCCATGCTCCGCTTCCAACCCGCCATTCTACAAGGGTACCGACGGCATCGT
GTGCAGAACGCCGATTACCCCGGGATCGTGGCGGTGCCAGAGACAGAAACCGAGACCAATTTATCTGCACCGAAA
ACCAGCGCTGGGACGTCCGTCGTAGGAACACTCGTGTCGGGACTAACAGACGGCGACGTTCACCGACTGGACAGA
TTTGAGGGATCGGAGTATGAGAAGAAACGGGTTACTGTGCGCACGCTGCAGGCTGTGGTGGGTGGTGACCACGTT
AATTCTAGCGAGGGTGCTGCTGAGAACCAGCTGCGCGAGATGCTCAATGCGACGACCGGCGCTGAGGTTGCGGCT
GAGGGGGAGGAAGTTTTGGCTATGACTTATGTTTATACTGCTGGGAAGGATATGCTTGAGGATTCGGAGTGGGAT
TTTGAGTCGTTTAAGAGGGATAAAATGGCGTGGTGGGTTCAGGCGGATGAGAGTGAGTGGTAG
Gene >Pro_DTO377G3_2|g6409.t1
ATGGGCGACCACGTCCTCTTCTTCTACGGTAAGTCCTTCTTGAATCAAGAGAAACCGAGAACTAAACTACCCAGG
AACCCTAATGGCGCCCCAAATCCTCCACAGAGTAATCCACGGCCAGGCGAACCCAGAGCCCTGGCAAAAAGCCAT
GCTCCGCTTCCAACCCGCCATTCTACAAGGGTACCGACGGCATCGTGTGCAGAACGCCGATTACCCCGGGATCGT
GGCGGTGCCAGAGACAGAAACCGAGACCAATTTATCTGCACCGAAAACCAGCGCTGGGACGTCCGTCGTAGGAAC
ACTCGTGTCGGGACTAACAGACGGCGACGTTCACCGACTGGACAGATTTGAGGGATCGGAGTATGAGAAGAAACG
GGTTACTGTGCGCACGCTGCAGGCTGTGGTGGGTGGTGACCACGTTAATTCTAGCGAGGGTGCTGCTGAGAACCA
GCTGCGCGAGATGCTCAATGCGACGACCGGCGCTGAGGTTGCGGCTGAGGGGGAGGAAGTTTTGGCTATGACTTA
TGTTTATACTGCTGGGAAGGATATGCTTGAGGATTCGGAGTGGGATTTTGAGTCGTTTAAGAGGGATAAAATGGC
GTGGTGGGTTCAGGCGGATGAGAGTGAGTGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail