Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6403.t1
Gene name
Locationscaffold_17:105385..106610
Strand+
Gene length (bp)1225
Transcript length (bp)1035
Coding sequence length (bp)1035
Protein length (aa) 345

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01227 GTP_cyclohydroI GTP cyclohydrolase I 4.2E-73 166 341

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6403.t1
MGSDSPTSPRASAIPSHMLNGSSPLHPTGSRHSRERESLNTSIRSSFEPRIPLEFESPQTKTETKTETEAEAGTE
TGAAPAQSVSSASVPIRSVAPVRPTLNDPPRDPRDEAAPLTPVATVSRPQSPYTLTPPIDFDGLSWPCPGTRQRK
ESTPEETAERLEKMSGAVRTILECIGEDPEREGLRETPMRYAKAMLYFTKGYEENVRDLVNNAVFHEDHDELVIV
KDIDVFSMCEHHMVPFTGKMHIGYIPDRRVLGLSKLARLAEMFSRRLQVQERLTKQVALAISEVLQPRGVGVVME
SSHLCMVMRGVQKVSSTTTTSCMLGCMRSSAKTREEFLTLLNRR*
Coding >Pro_DTO377G3_2|g6403.t1
ATGGGTTCCGATTCCCCTACAAGCCCCAGGGCCTCAGCCATTCCGTCCCACATGTTGAACGGCAGCTCCCCGCTG
CATCCAACGGGCAGCCGTCATTCTCGTGAGCGCGAGAGTCTCAATACATCCATTCGTTCCTCTTTTGAGCCCAGA
ATTCCCCTTGAATTTGAATCTCCTCAGACCAAGACCGAGACCAAGACCGAGACCGAGGCCGAGGCCGGAACTGAG
ACTGGAGCCGCCCCCGCCCAGTCCGTCTCCAGTGCCTCCGTGCCAATTCGCAGCGTCGCGCCAGTGCGTCCTACC
TTGAATGACCCTCCCCGCGATCCCCGGGATGAGGCCGCCCCATTGACACCTGTAGCCACTGTCAGCCGGCCACAG
AGCCCCTACACATTGACCCCTCCTATCGACTTTGACGGTCTCAGCTGGCCTTGCCCCGGAACAAGACAGCGGAAG
GAGTCAACACCGGAGGAGACCGCGGAACGGCTTGAAAAGATGTCAGGAGCTGTCCGAACAATCCTGGAATGTATT
GGCGAGGATCCGGAAAGAGAAGGACTTCGTGAGACCCCCATGCGATATGCCAAGGCCATGCTTTATTTCACCAAG
GGCTACGAGGAGAATGTTCGCGATTTGGTCAACAACGCTGTTTTCCATGAGGATCACGATGAGTTGGTCATTGTC
AAGGACATCGACGTCTTCTCGATGTGCGAACATCACATGGTACCATTCACCGGAAAGATGCATATCGGATACATC
CCTGACCGCCGTGTCCTTGGTCTATCAAAGCTGGCTCGTCTGGCAGAGATGTTCTCTCGCAGACTGCAGGTTCAG
GAGCGTCTTACCAAGCAAGTTGCGTTGGCGATTTCGGAGGTCCTCCAGCCCCGCGGCGTTGGTGTCGTTATGGAA
TCTTCCCACCTCTGCATGGTCATGCGCGGTGTGCAGAAGGTTAGCAGCACCACTACTACTAGCTGTATGCTGGGA
TGTATGCGGTCCAGCGCCAAGACTCGCGAAGAGTTCTTGACTCTGTTGAACCGGAGGTAA
Transcript >Pro_DTO377G3_2|g6403.t1
ATGGGTTCCGATTCCCCTACAAGCCCCAGGGCCTCAGCCATTCCGTCCCACATGTTGAACGGCAGCTCCCCGCTG
CATCCAACGGGCAGCCGTCATTCTCGTGAGCGCGAGAGTCTCAATACATCCATTCGTTCCTCTTTTGAGCCCAGA
ATTCCCCTTGAATTTGAATCTCCTCAGACCAAGACCGAGACCAAGACCGAGACCGAGGCCGAGGCCGGAACTGAG
ACTGGAGCCGCCCCCGCCCAGTCCGTCTCCAGTGCCTCCGTGCCAATTCGCAGCGTCGCGCCAGTGCGTCCTACC
TTGAATGACCCTCCCCGCGATCCCCGGGATGAGGCCGCCCCATTGACACCTGTAGCCACTGTCAGCCGGCCACAG
AGCCCCTACACATTGACCCCTCCTATCGACTTTGACGGTCTCAGCTGGCCTTGCCCCGGAACAAGACAGCGGAAG
GAGTCAACACCGGAGGAGACCGCGGAACGGCTTGAAAAGATGTCAGGAGCTGTCCGAACAATCCTGGAATGTATT
GGCGAGGATCCGGAAAGAGAAGGACTTCGTGAGACCCCCATGCGATATGCCAAGGCCATGCTTTATTTCACCAAG
GGCTACGAGGAGAATGTTCGCGATTTGGTCAACAACGCTGTTTTCCATGAGGATCACGATGAGTTGGTCATTGTC
AAGGACATCGACGTCTTCTCGATGTGCGAACATCACATGGTACCATTCACCGGAAAGATGCATATCGGATACATC
CCTGACCGCCGTGTCCTTGGTCTATCAAAGCTGGCTCGTCTGGCAGAGATGTTCTCTCGCAGACTGCAGGTTCAG
GAGCGTCTTACCAAGCAAGTTGCGTTGGCGATTTCGGAGGTCCTCCAGCCCCGCGGCGTTGGTGTCGTTATGGAA
TCTTCCCACCTCTGCATGGTCATGCGCGGTGTGCAGAAGGTTAGCAGCACCACTACTACTAGCTGTATGCTGGGA
TGTATGCGGTCCAGCGCCAAGACTCGCGAAGAGTTCTTGACTCTGTTGAACCGGAGGTAA
Gene >Pro_DTO377G3_2|g6403.t1
ATGGGTTCCGATTCCCCTACAAGCCCCAGGGCCTCAGCCATTCCGTCCCACATGTTGAACGGCAGCTCCCCGCTG
CATCCAACGGGCAGCCGTCATTCTCGTGAGCGCGAGAGTCTCAATACATCCATTCGTTCCTCTTTTGAGCCCAGA
ATTCCCCTTGAATTTGAATCTCCTCAGACCAAGACCGAGACCAAGACCGAGACCGAGGCCGAGGCCGGAACTGAG
ACTGGAGCCGCCCCCGCCCAGTCCGTCTCCAGTGCCTCCGTGCCAATTCGCAGCGTCGCGCCAGTGCGGTATGTA
TACAGCGATATAACCATTAATGATAATGGTGCTTTCGATTCCGTTGCTAATCTCTGCCTAGTCCTACCTTGAATG
ACCCTCCCCGCGATCCCCGGGATGAGGCCGCCCCATTGACACCTGTAGCCACTGTCAGCCGGCCACAGAGCCCCT
ACACATTGACCCCTCCTATCGACTTTGACGGTCTCAGCTGGCCTTGTTAGTGATACCACCCCTCTCGGTGGACGC
CACTGTATTGGTAAATGTCTCTAATCACCGTCACCTAGGCCCCGGAACAAGACAGCGGAAGGAGTCAACACCGGA
GGAGACCGCGGAACGGCTTGAAAAGATGTCAGGAGCTGTCCGAACAATCCTGGAATGTATTGGCGAGGATCCGGA
AAGAGAAGGACTTCGTGAGACCCCCATGCGATATGCCAAGGCCATGCTTTATTTCACCAAGGGCTACGAGGAGAA
TGTTCGCGATTTGGTCAACAACGCTGTTTTCCATGAGGATCACGATGAGTTGGTCATTGTCAAGGACATCGACGT
CTTCTCGATGTGCGAACATCACATGGTACCATTCACCGGAAAGGTAAATTGCCGCAGATATCGATACTGTGATTA
TATTCATTCTAACAATTTACAGATGCATATCGGATACATCCCTGACCGCCGTGTCCTTGGTCTATCAAAGCTGGC
TCGTCTGGCAGAGATGTTCTCTCGCAGACTGCAGGTTCAGGAGCGTCTTACCAAGCAAGTTGCGTTGGCGATTTC
GGAGGTCCTCCAGCCCCGCGGCGTTGGTGTCGTTATGGAATCTTCCCACCTCTGCATGGTCATGCGCGGTGTGCA
GAAGGTTAGCAGCACCACTACTACTAGCTGTATGCTGGGATGTATGCGGTCCAGCGCCAAGACTCGCGAAGAGTT
CTTGACTCTGTTGAACCGGAGGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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