Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6397.t1
Gene name
Locationscaffold_17:84707..85916
Strand-
Gene length (bp)1209
Transcript length (bp)1002
Coding sequence length (bp)1002
Protein length (aa) 334

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 8.7E-03 10 45
PF00400 WD40 WD domain, G-beta repeat 1.8E-02 64 100
PF00400 WD40 WD domain, G-beta repeat 1.1E-04 108 143
PF00400 WD40 WD domain, G-beta repeat 3.0E-01 199 225
PF00400 WD40 WD domain, G-beta repeat 3.1E-01 308 332

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6397.t1
MPRTIFPTRHIHTLKTHNGPVNAVTFSNSGGTYVLTGSSDRAVHLSRAVPNNTNSPTVVETTTPIQKYEAHGYSV
LDIAVTADNARFASVGGDRQVFLWDVEQGITTKRWSGHNSRVEAVQFGGDGDSVVVTGSADTTINLWDTRSTSYK
PIQTLTEASDTVSTLHVHMPSYSIASGSYDGHARIYDVRTGKTTVDVLAHPVTSVRCSSDGNALLASTLDGYIRL
LDRMDGKLLNAFGGEKAVVGGIGKPRYSYRNAELRVRSVFAMGDAVVLSGSEEGVAGAAAFAWDVVKGEVIAAVP
VGEKVKAVSCVAWNEGVGDWAAGCSDGTVRVYG*
Coding >Pro_DTO377G3_2|g6397.t1
ATGCCCCGGACAATATTCCCAACTAGGCATATCCACACTCTTAAAACACACAATGGCCCCGTCAACGCGGTAACA
TTCTCAAACTCCGGCGGCACATATGTCCTCACAGGCTCCTCAGACCGAGCAGTACACCTTTCGCGCGCCGTTCCA
AACAATACCAATAGCCCGACCGTAGTCGAGACGACGACTCCAATCCAAAAATACGAAGCACATGGCTACTCCGTC
CTCGACATCGCCGTCACAGCCGACAACGCGCGCTTCGCCAGCGTAGGAGGCGATCGCCAAGTCTTCCTCTGGGAT
GTAGAGCAAGGCATCACGACGAAACGCTGGAGCGGCCACAACAGCCGAGTCGAAGCCGTGCAATTTGGCGGCGAT
GGGGACTCCGTCGTAGTAACCGGTAGCGCAGACACAACAATCAACCTCTGGGATACCCGGTCCACAAGCTACAAA
CCCATCCAAACGCTCACGGAAGCCAGCGACACGGTCTCCACACTACACGTACACATGCCGAGCTACTCAATAGCA
AGCGGCAGCTACGACGGACACGCACGGATCTACGACGTCCGCACGGGAAAGACAACCGTCGACGTCCTCGCGCAC
CCGGTGACAAGCGTGCGCTGCTCGAGCGACGGGAACGCGCTGCTGGCGTCGACGCTGGACGGGTATATCCGCTTG
CTGGACCGCATGGATGGGAAGTTGCTCAATGCGTTTGGGGGCGAGAAGGCGGTGGTCGGTGGGATTGGGAAGCCG
CGGTATTCGTATCGGAATGCGGAGCTGCGCGTGCGCTCGGTTTTCGCGATGGGGGATGCGGTCGTGCTGAGTGGG
AGTGAGGAGGGGGTTGCGGGGGCGGCGGCGTTTGCTTGGGATGTTGTTAAGGGGGAGGTTATTGCTGCTGTGCCG
GTTGGGGAGAAGGTTAAGGCTGTTAGTTGTGTGGCGTGGAATGAGGGTGTAGGGGATTGGGCTGCTGGATGTTCT
GATGGTACTGTCAGGGTCTACGGATGA
Transcript >Pro_DTO377G3_2|g6397.t1
ATGCCCCGGACAATATTCCCAACTAGGCATATCCACACTCTTAAAACACACAATGGCCCCGTCAACGCGGTAACA
TTCTCAAACTCCGGCGGCACATATGTCCTCACAGGCTCCTCAGACCGAGCAGTACACCTTTCGCGCGCCGTTCCA
AACAATACCAATAGCCCGACCGTAGTCGAGACGACGACTCCAATCCAAAAATACGAAGCACATGGCTACTCCGTC
CTCGACATCGCCGTCACAGCCGACAACGCGCGCTTCGCCAGCGTAGGAGGCGATCGCCAAGTCTTCCTCTGGGAT
GTAGAGCAAGGCATCACGACGAAACGCTGGAGCGGCCACAACAGCCGAGTCGAAGCCGTGCAATTTGGCGGCGAT
GGGGACTCCGTCGTAGTAACCGGTAGCGCAGACACAACAATCAACCTCTGGGATACCCGGTCCACAAGCTACAAA
CCCATCCAAACGCTCACGGAAGCCAGCGACACGGTCTCCACACTACACGTACACATGCCGAGCTACTCAATAGCA
AGCGGCAGCTACGACGGACACGCACGGATCTACGACGTCCGCACGGGAAAGACAACCGTCGACGTCCTCGCGCAC
CCGGTGACAAGCGTGCGCTGCTCGAGCGACGGGAACGCGCTGCTGGCGTCGACGCTGGACGGGTATATCCGCTTG
CTGGACCGCATGGATGGGAAGTTGCTCAATGCGTTTGGGGGCGAGAAGGCGGTGGTCGGTGGGATTGGGAAGCCG
CGGTATTCGTATCGGAATGCGGAGCTGCGCGTGCGCTCGGTTTTCGCGATGGGGGATGCGGTCGTGCTGAGTGGG
AGTGAGGAGGGGGTTGCGGGGGCGGCGGCGTTTGCTTGGGATGTTGTTAAGGGGGAGGTTATTGCTGCTGTGCCG
GTTGGGGAGAAGGTTAAGGCTGTTAGTTGTGTGGCGTGGAATGAGGGTGTAGGGGATTGGGCTGCTGGATGTTCT
GATGGTACTGTCAGGGTCTACGGATGA
Gene >Pro_DTO377G3_2|g6397.t1
ATGCCCCGGACAATATTCCCAACTAGGCATATCCACACTCTTAAAACACACAATGGTAAAGTCTTATTGTCTAGG
GGTTATTACAACCAAATCACCTCCAAAGCACAAACACTGACATTCATCTAGGCCCCGTCAACGCGGTAACATTCT
CAAACTCCGGCGGCACATATGTCCTCACAGGCTCCTCAGACCGAGCAGTACACCTTTCGCGCGCCGTTCCAAACA
ATACCAATAGCCCGACCGTAGTCGAGACGACGACTCCAATCCAAAAATACGAAGCACATGGCTACTCCGTCCTCG
ACATCGCCGTCACAGCCGACAACGCGCGCTTCGCCAGCGTAGGAGGCGATCGCCAAGTCTTCCTCTGGGATGTAG
AGCAAGGCATCACGACGAAACGCTGGAGCGGCCACAACAGCCGAGTCGAAGCCGTGCAATTTGGCGGCGATGGGG
ACTCCGTCGTAGTAACCGGTAAGAGTCCCCTTATCCCCACACTCTTCCCTTCCCTTCCCACCTAGCATCCTAATC
TAACGTCCTCCCTCCCTCCAGGTAGCGCAGACACAACAATCAACCTCTGGGATACCCGGTCCACAAGCTACAAAC
CCATCCAAACGCTCACGGAAGCCAGCGACACGGTCTCCACACTACACGTACACATGCCGAGCTACTCAATAGCAA
GCGGCAGCTACGACGGACACGCACGGATCTACGACGTCCGCACGGGAAAGACAACCGTCGACGTCCTCGCGCACC
CGGTGACAAGCGTGCGCTGCTCGAGCGACGGGAACGCGCTGCTGGCGTCGACGCTGGACGGGTATATCCGCTTGC
TGGACCGCATGGATGGGAAGTTGCTCAATGCGTTTGGGGGCGAGAAGGCGGTGGTCGGTGGGATTGGGAAGCCGC
GGTATTCGTATCGGAATGCGGAGCTGCGCGTGCGCTCGGTTTTCGCGATGGGGGATGCGGTCGTGCTGAGTGGGA
GTGAGGAGGGGGTTGCGGGGGCGGCGGCGTTTGCTTGGGATGTTGTTAAGGGGGAGGTTATTGCTGCTGTGCCGG
TTGGGGAGAAGGTTAAGGCTGTTAGTTGTGTGGCGTGGAATGAGGGTGTAGGGGATTGGGCTGCTGGATGTTCTG
ATGGTGAGGATAAGGATTGTGTTGTTTGGCGGGTTGGGATACTTGCTGACTGTTGGTTTAGGTACTGTCAGGGTC
TACGGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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