Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g6379.t1
Gene name
Location	scaffold_17:27313..28543
Strand	-
Gene length (bp)	1230
Transcript length (bp)	1065
Coding sequence length (bp)	1065
Protein length (aa)	355

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00956	NAP	Nucleosome assembly protein (NAP)	1.4E-29	65	316

GO

GO Term	Description	Terminal node
GO:0006334	nucleosome assembly	Yes
GO:0005634	nucleus	Yes
GO:0009987	cellular process	No
GO:0043231	intracellular membrane-bounded organelle	No
GO:0022607	cellular component assembly	No
GO:0044464	cell part	No
GO:0043227	membrane-bounded organelle	No
GO:0016043	cellular component organization	No
GO:0006325	chromatin organization	No
GO:0034728	nucleosome organization	No
GO:0043933	protein-containing complex subunit organization	No
GO:0071840	cellular component organization or biogenesis	No
GO:0065003	protein-containing complex assembly	No
GO:0043226	organelle	No
GO:0034622	cellular protein-containing complex assembly	No
GO:0043229	intracellular organelle	No
GO:0005575	cellular_component	No
GO:0071824	protein-DNA complex subunit organization	No
GO:0008150	biological_process	No
GO:0065004	protein-DNA complex assembly	No
GO:0044424	intracellular part	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 65	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g6379.t1 MSNDQSLLDRVEMPSIPEAAMKKIAVLEEQFARAEVEQLRHSVKLMTPLIQKRSEIINIPDVQAEFWMRVFASAP PEIDEYILATDAQVLGECLKNMNVERFELDAQGNGEPRSLRFTFEFKTGDENPFFTNEKLVKEFYWRQEVSKNAA GKTRTWEGLVSEPVRINWKKDQDLTKGMLDAACDLAEAEKKKGGDRRKLPEFAALVKKVEEAEAEANEDDEDDEE PSPVGMSFFGFFGYRGRDVSAAQSKEAAKEIEARWAKIQNGEDIEEAGDSDSEDEEDDTEGVEEIDIFPDGDDLA VAIAEDLWPDALSYYVQSFQIGEELEDMDLDMEELDGDDSDEDSELRPRKKARN*
Coding	>Pro_DTO377G3_2\|g6379.t1 ATGTCTAACGATCAGTCCCTCCTTGACCGTGTCGAGATGCCTAGCATCCCTGAGGCTGCTATGAAGAAGATTGCT GTTCTGGAAGAGCAGTTCGCCCGTGCTGAGGTTGAGCAGTTGCGCCACTCCGTCAAGCTCATGACCCCCCTGATC CAGAAGCGCAGCGAGATCATCAACATCCCCGATGTCCAGGCTGAGTTCTGGATGCGCGTCTTTGCTAGCGCTCCC CCCGAGATCGACGAGTACATCCTGGCCACCGATGCCCAAGTGCTCGGTGAGTGCCTCAAGAACATGAACGTCGAG CGATTCGAGCTCGACGCCCAAGGCAACGGCGAGCCCCGCAGCTTGCGCTTCACATTTGAGTTCAAGACCGGCGAC GAGAACCCCTTCTTCACCAACGAGAAGCTCGTCAAGGAGTTCTACTGGCGCCAGGAGGTCTCCAAGAACGCCGCT GGCAAGACCCGCACCTGGGAGGGTCTGGTCTCCGAGCCCGTCCGTATCAACTGGAAGAAGGATCAGGATTTGACC AAGGGCATGCTCGATGCCGCTTGCGACCTTGCCGAGGCTGAGAAGAAGAAGGGCGGTGACCGCAGAAAGTTGCCC GAGTTCGCTGCTCTCGTTAAGAAGGTCGAGGAGGCTGAGGCCGAGGCCAACGAGGATGACGAGGATGACGAGGAG CCCAGCCCCGTTGGCATGAGCTTCTTCGGATTCTTCGGATACCGCGGCCGTGATGTCTCCGCCGCTCAGTCCAAG GAGGCTGCCAAGGAGATCGAGGCTCGCTGGGCCAAGATCCAGAACGGCGAGGATATCGAGGAGGCCGGTGACTCC GACTCCGAGGATGAGGAAGATGACACCGAGGGAGTTGAGGAAATCGATATCTTCCCCGATGGAGATGACCTTGCT GTTGCCATTGCCGAGGACCTCTGGCCCGATGCGCTCAGCTACTACGTTCAATCCTTCCAAATCGGCGAAGAGCTC GAAGATATGGACCTCGATATGGAGGAACTGGACGGAGACGACTCCGATGAAGACAGTGAGTTGCGTCCGCGCAAG AAGGCTCGAAACTAA
Transcript	>Pro_DTO377G3_2\|g6379.t1 ATGTCTAACGATCAGTCCCTCCTTGACCGTGTCGAGATGCCTAGCATCCCTGAGGCTGCTATGAAGAAGATTGCT GTTCTGGAAGAGCAGTTCGCCCGTGCTGAGGTTGAGCAGTTGCGCCACTCCGTCAAGCTCATGACCCCCCTGATC CAGAAGCGCAGCGAGATCATCAACATCCCCGATGTCCAGGCTGAGTTCTGGATGCGCGTCTTTGCTAGCGCTCCC CCCGAGATCGACGAGTACATCCTGGCCACCGATGCCCAAGTGCTCGGTGAGTGCCTCAAGAACATGAACGTCGAG CGATTCGAGCTCGACGCCCAAGGCAACGGCGAGCCCCGCAGCTTGCGCTTCACATTTGAGTTCAAGACCGGCGAC GAGAACCCCTTCTTCACCAACGAGAAGCTCGTCAAGGAGTTCTACTGGCGCCAGGAGGTCTCCAAGAACGCCGCT GGCAAGACCCGCACCTGGGAGGGTCTGGTCTCCGAGCCCGTCCGTATCAACTGGAAGAAGGATCAGGATTTGACC AAGGGCATGCTCGATGCCGCTTGCGACCTTGCCGAGGCTGAGAAGAAGAAGGGCGGTGACCGCAGAAAGTTGCCC GAGTTCGCTGCTCTCGTTAAGAAGGTCGAGGAGGCTGAGGCCGAGGCCAACGAGGATGACGAGGATGACGAGGAG CCCAGCCCCGTTGGCATGAGCTTCTTCGGATTCTTCGGATACCGCGGCCGTGATGTCTCCGCCGCTCAGTCCAAG GAGGCTGCCAAGGAGATCGAGGCTCGCTGGGCCAAGATCCAGAACGGCGAGGATATCGAGGAGGCCGGTGACTCC GACTCCGAGGATGAGGAAGATGACACCGAGGGAGTTGAGGAAATCGATATCTTCCCCGATGGAGATGACCTTGCT GTTGCCATTGCCGAGGACCTCTGGCCCGATGCGCTCAGCTACTACGTTCAATCCTTCCAAATCGGCGAAGAGCTC GAAGATATGGACCTCGATATGGAGGAACTGGACGGAGACGACTCCGATGAAGACAGTGAGTTGCGTCCGCGCAAG AAGGCTCGAAACTAA
Gene	>Pro_DTO377G3_2\|g6379.t1 ATGTCTAACGATCAGTCCCTCCTTGACCGTGTCGAGATGCCTAGCATCCCTGAGGCTGCTATGAAGAAGATTGCT GTTCTGGAAGAGCAGTTCGCCCGTGCTGAGGTTGAGCAGTGTATGTTTCTGTTGATTTTCTATTTTGTTATGGAG TGAACAGCTCGCAGAGGCTACTCTACCATGCATTCAGAAGCGCACCTATCGATAACCCAATTGCTAACATACACA CTCTAGTGCGCCACTCCGTCAAGCTCATGACCCCCCTGATCCAGAAGCGCAGCGAGATCATCAACATCCCCGATG TCCAGGCTGAGTTCTGGATGCGCGTCTTTGCTAGCGCTCCCCCCGAGATCGACGAGTACATCCTGGCCACCGATG CCCAAGTGCTCGGTGAGTGCCTCAAGAACATGAACGTCGAGCGATTCGAGCTCGACGCCCAAGGCAACGGCGAGC CCCGCAGCTTGCGCTTCACATTTGAGTTCAAGACCGGCGACGAGAACCCCTTCTTCACCAACGAGAAGCTCGTCA AGGAGTTCTACTGGCGCCAGGAGGTCTCCAAGAACGCCGCTGGCAAGACCCGCACCTGGGAGGGTCTGGTCTCCG AGCCCGTCCGTATCAACTGGAAGAAGGATCAGGATTTGACCAAGGGCATGCTCGATGCCGCTTGCGACCTTGCCG AGGCTGAGAAGAAGAAGGGCGGTGACCGCAGAAAGTTGCCCGAGTTCGCTGCTCTCGTTAAGAAGGTCGAGGAGG CTGAGGCCGAGGCCAACGAGGATGACGAGGATGACGAGGAGCCCAGCCCCGTTGGCATGAGCTTCTTCGGATTCT TCGGATACCGCGGCCGTGATGTCTCCGCCGCTCAGTCCAAGGAGGCTGCCAAGGAGATCGAGGCTCGCTGGGCCA AGATCCAGAACGGCGAGGATATCGAGGAGGCCGGTGACTCCGACTCCGAGGATGAGGAAGATGACACCGAGGGAG TTGAGGAAATCGATATCTTCCCCGATGGAGATGACCTTGCTGTTGCCATTGCCGAGGACCTCTGGCCCGATGCGC TCAGCTACTACGGTATGTAGATCCCGAACGAGTCAGATGTTCCCCTGCTGACTTTGACCAGTTCAATCCTTCCAA ATCGGCGAAGAGCTCGAAGATATGGACCTCGATATGGAGGAACTGGACGGAGACGACTCCGATGAAGACAGTGAG TTGCGTCCGCGCAAGAAGGCTCGAAACTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences