Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6369.t1
Gene name
Locationscaffold_17:4855..5898
Strand+
Gene length (bp)1043
Transcript length (bp)942
Coding sequence length (bp)942
Protein length (aa) 314

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 1.2E-36 8 216
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 4.5E-30 14 243

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6369.t1
MSISVQGKTAIVTGAGSGINLCFARLLVENGCNVLIADLALRPEAQVFVDEHKTDSPRVVFQETNVVDWAQLERM
FEVAEKEFGEIDIVCPGAGVYEPLWSNFWRPPGAGDSKDSPTGGRYAIIDINLTHPIRTTQLAIAHFLNNCTSGR
PKHILHISSIAAQNANLANPVYCATKHAISGFVRSLANLDKKFGIRVTAVAPGVIKTPLWTEHPEKMKLIDGSDE
WVTPEEVAEVMLALLQQDEVSETIGDRSGNGQQFKVEGGTILEVSKTVRAVAQFNDPGPGNRPGNTASDHHEVEE
ETYKILEQKGWGL*
Coding >Pro_DTO377G3_2|g6369.t1
ATGTCTATCTCTGTGCAAGGAAAGACCGCCATCGTAACTGGAGCTGGCTCCGGTATCAACCTCTGCTTTGCCAGA
TTGCTAGTTGAAAATGGCTGCAATGTCCTAATTGCAGACCTAGCCTTGCGTCCCGAAGCGCAAGTGTTCGTCGAT
GAGCACAAGACCGATTCCCCGCGAGTGGTCTTCCAAGAGACCAATGTGGTTGACTGGGCTCAGCTCGAGCGGATG
TTCGAGGTTGCCGAGAAGGAGTTCGGCGAGATTGATATTGTTTGCCCGGGCGCGGGAGTCTACGAGCCGCTCTGG
AGCAACTTCTGGCGCCCACCTGGCGCGGGCGACAGCAAGGACTCGCCCACTGGCGGGCGATACGCTATAATCGAT
ATCAACCTCACCCACCCGATCCGCACGACCCAGTTGGCAATTGCTCATTTCTTGAACAACTGTACCAGCGGTCGC
CCGAAGCATATCCTTCATATCTCCAGTATTGCAGCCCAGAATGCTAATCTCGCCAACCCGGTTTACTGCGCCACG
AAACACGCCATTAGCGGCTTTGTGCGTTCGCTCGCCAATCTCGACAAGAAGTTTGGTATCCGAGTCACGGCCGTG
GCTCCCGGTGTTATCAAGACTCCGCTCTGGACTGAACACCCGGAGAAGATGAAGTTGATTGATGGTAGCGATGAG
TGGGTGACGCCCGAGGAAGTGGCCGAGGTGATGTTGGCGCTTTTGCAGCAGGATGAGGTCAGCGAGACTATCGGC
GACCGGTCGGGTAATGGGCAGCAGTTTAAGGTGGAGGGAGGTACGATTCTGGAGGTATCAAAGACTGTGCGCGCA
GTCGCTCAATTCAATGACCCTGGTCCTGGCAATCGCCCTGGAAACACGGCGTCGGATCATCACGAGGTCGAGGAG
GAGACTTATAAGATCCTGGAGCAGAAAGGATGGGGACTGTGA
Transcript >Pro_DTO377G3_2|g6369.t1
ATGTCTATCTCTGTGCAAGGAAAGACCGCCATCGTAACTGGAGCTGGCTCCGGTATCAACCTCTGCTTTGCCAGA
TTGCTAGTTGAAAATGGCTGCAATGTCCTAATTGCAGACCTAGCCTTGCGTCCCGAAGCGCAAGTGTTCGTCGAT
GAGCACAAGACCGATTCCCCGCGAGTGGTCTTCCAAGAGACCAATGTGGTTGACTGGGCTCAGCTCGAGCGGATG
TTCGAGGTTGCCGAGAAGGAGTTCGGCGAGATTGATATTGTTTGCCCGGGCGCGGGAGTCTACGAGCCGCTCTGG
AGCAACTTCTGGCGCCCACCTGGCGCGGGCGACAGCAAGGACTCGCCCACTGGCGGGCGATACGCTATAATCGAT
ATCAACCTCACCCACCCGATCCGCACGACCCAGTTGGCAATTGCTCATTTCTTGAACAACTGTACCAGCGGTCGC
CCGAAGCATATCCTTCATATCTCCAGTATTGCAGCCCAGAATGCTAATCTCGCCAACCCGGTTTACTGCGCCACG
AAACACGCCATTAGCGGCTTTGTGCGTTCGCTCGCCAATCTCGACAAGAAGTTTGGTATCCGAGTCACGGCCGTG
GCTCCCGGTGTTATCAAGACTCCGCTCTGGACTGAACACCCGGAGAAGATGAAGTTGATTGATGGTAGCGATGAG
TGGGTGACGCCCGAGGAAGTGGCCGAGGTGATGTTGGCGCTTTTGCAGCAGGATGAGGTCAGCGAGACTATCGGC
GACCGGTCGGGTAATGGGCAGCAGTTTAAGGTGGAGGGAGGTACGATTCTGGAGGTATCAAAGACTGTGCGCGCA
GTCGCTCAATTCAATGACCCTGGTCCTGGCAATCGCCCTGGAAACACGGCGTCGGATCATCACGAGGTCGAGGAG
GAGACTTATAAGATCCTGGAGCAGAAAGGATGGGGACTGTGA
Gene >Pro_DTO377G3_2|g6369.t1
ATGTCTATCTCTGTGCAAGGAAAGACCGCCATCGTAACTGGAGCTGGCTCCGGTATGTCTCCTGCATACTGCAAT
ATCAAACGGAAGCTTACACGTAGTCAGGTATCAACCTCTGCTTTGCCAGATTGCTAGTTGAAAATGGCTGCAATG
TCCTAATTGCAGACCTAGCCTTGCGTCCCGAAGCGCAAGTGTTCGTCGATGAGCACAAGACCGATTCCCCGCGAG
TGGTCTTCCAAGAGACCAATGTGGTTGACTGGGCTCAGCTCGAGCGGATGTTCGAGGTTGCCGAGAAGGAGTTCG
GCGAGATTGATATTGTTTGCCCGGGCGCGGGAGTCTACGAGCCGGTAAGACCAAAAAAACCCCCAACAAATCTAC
AAGTCTAACTAGAACAATAGCTCTGGAGCAACTTCTGGCGCCCACCTGGCGCGGGCGACAGCAAGGACTCGCCCA
CTGGCGGGCGATACGCTATAATCGATATCAACCTCACCCACCCGATCCGCACGACCCAGTTGGCAATTGCTCATT
TCTTGAACAACTGTACCAGCGGTCGCCCGAAGCATATCCTTCATATCTCCAGTATTGCAGCCCAGAATGCTAATC
TCGCCAACCCGGTTTACTGCGCCACGAAACACGCCATTAGCGGCTTTGTGCGTTCGCTCGCCAATCTCGACAAGA
AGTTTGGTATCCGAGTCACGGCCGTGGCTCCCGGTGTTATCAAGACTCCGCTCTGGACTGAACACCCGGAGAAGA
TGAAGTTGATTGATGGTAGCGATGAGTGGGTGACGCCCGAGGAAGTGGCCGAGGTGATGTTGGCGCTTTTGCAGC
AGGATGAGGTCAGCGAGACTATCGGCGACCGGTCGGGTAATGGGCAGCAGTTTAAGGTGGAGGGAGGTACGATTC
TGGAGGTATCAAAGACTGTGCGCGCAGTCGCTCAATTCAATGACCCTGGTCCTGGCAATCGCCCTGGAAACACGG
CGTCGGATCATCACGAGGTCGAGGAGGAGACTTATAAGATCCTGGAGCAGAAAGGATGGGGACTGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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