Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6352.t1
Gene name
Locationscaffold_16:579541..581365
Strand+
Gene length (bp)1824
Transcript length (bp)1701
Coding sequence length (bp)1701
Protein length (aa) 567

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00291 PALP Pyridoxal-phosphate dependent enzyme 4.5E-75 73 346
PF00585 Thr_dehydrat_C C-terminal regulatory domain of Threonine dehydratase 1.7E-21 378 470
PF00585 Thr_dehydrat_C C-terminal regulatory domain of Threonine dehydratase 1.6E-20 477 563

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 43 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6352.t1
MSDEAPNGATTPVTPKTSGLALTEYTAAPTPPSEREQRTPGLPPNWGIPEAFLLPNGYPDYLRLILTSRVYDVIE
ESPLTHAVNLSSRLESRVLLKREDLLPVFSFKLRGAYNKMAHLSDEQRWKGVVACSAGNHAQGVAFSARKLRIPA
TIVMPSGTPAIKHLNVARLGGSVVLHGMDFDAAKDEAHRLEKLHGLTNIPPFDDPYVIAGQGTIGMELLRQANLD
KLEAVFCAVGGGGLIAGIGVYLKRIAPQVKVIGVEAYDANAMAQSLDAGKRVFLKEVGLFADGAAVKSVGEETWR
LSREVIDEVIQVSTDETCAAIKDAFEDTRSIVEPAGALALAGLKKYIAKNPSPDPNRELIAITSGANMDFDRLRF
VAERAALGEKKEALLSVKIPEKPGAFAKLVETVLPHAVTAFNYRYARADSADVLMGISLSASTGREDLAKIMGEL
EKAGMSCRDLSDDELAKRHVRFLVGGRCEAADERIFMFEFPERPGALAKFLTTLRPEQNISLFHYRNYGGDVGKV
LAGIQCPSPEKEDLEAFLRDLGYPFSEHTDSPTYKTFLRSE*
Coding >Pro_DTO377G3_2|g6352.t1
ATGTCCGACGAGGCTCCCAACGGCGCCACGACGCCCGTCACTCCCAAGACGAGCGGGCTTGCGCTGACTGAGTAT
ACCGCCGCTCCGACGCCGCCCTCTGAACGTGAGCAAAGGACCCCAGGATTGCCTCCTAATTGGGGAATTCCCGAA
GCTTTTCTGCTTCCCAACGGCTACCCAGATTATCTCCGGTTGATTTTGACGTCACGAGTTTACGATGTTATTGAA
GAAAGCCCTCTTACCCATGCTGTCAACCTGAGTAGCCGGTTGGAAAGCCGGGTGCTTCTCAAGCGCGAGGATCTG
CTTCCGGTGTTCAGCTTCAAGCTCCGTGGCGCATACAACAAGATGGCTCATTTGAGTGATGAGCAGCGCTGGAAG
GGCGTTGTTGCTTGCTCTGCTGGAAATCATGCTCAAGGTGTGGCCTTTTCTGCCCGCAAGCTGAGAATCCCCGCT
ACCATCGTCATGCCCTCCGGCACCCCTGCCATTAAACACCTGAATGTTGCTCGCTTGGGAGGAAGTGTGGTTCTT
CACGGAATGGACTTCGATGCTGCCAAAGATGAGGCTCACCGATTAGAGAAGCTGCATGGTCTAACGAACATTCCA
CCGTTCGACGACCCTTATGTCATTGCTGGCCAAGGTACCATCGGCATGGAGCTTCTGCGCCAAGCAAACTTGGAC
AAGCTCGAGGCAGTCTTCTGTGCTGTTGGAGGAGGTGGTCTTATTGCCGGCATCGGAGTTTACCTCAAGCGCATC
GCACCCCAGGTGAAGGTCATCGGTGTCGAGGCTTACGATGCCAACGCTATGGCCCAGTCCCTCGATGCGGGTAAA
CGAGTCTTCCTCAAGGAGGTTGGGCTCTTTGCAGATGGTGCAGCAGTGAAGTCTGTTGGCGAGGAAACTTGGCGT
CTCAGCCGGGAGGTCATCGACGAAGTCATCCAGGTGTCCACCGACGAGACCTGCGCGGCTATCAAGGACGCCTTC
GAGGACACCCGGTCCATCGTTGAGCCTGCCGGTGCTCTCGCTCTTGCCGGTCTCAAGAAGTATATTGCCAAGAAC
CCTAGCCCTGACCCCAACCGCGAGCTTATTGCCATTACCTCCGGTGCTAATATGGACTTCGACCGTCTGCGGTTT
GTTGCTGAGCGCGCAGCTCTCGGTGAGAAGAAGGAGGCTCTTCTTAGCGTGAAGATCCCCGAGAAGCCCGGCGCG
TTCGCCAAGCTCGTTGAAACTGTCCTGCCCCACGCCGTTACCGCGTTCAACTACCGGTACGCCCGCGCAGATTCG
GCTGATGTGCTGATGGGTATCTCGCTATCTGCCTCTACTGGCCGCGAAGACTTGGCCAAGATCATGGGAGAGCTG
GAAAAGGCCGGCATGAGCTGCCGGGATTTGAGTGATGACGAACTTGCCAAGCGCCATGTGCGCTTCCTCGTTGGC
GGCCGCTGCGAGGCTGCCGATGAGCGCATCTTCATGTTCGAGTTTCCCGAGCGTCCAGGTGCTCTCGCCAAGTTC
CTCACCACCCTTCGTCCGGAACAGAATATCTCTCTGTTCCACTATCGAAACTACGGCGGTGATGTCGGCAAGGTT
CTAGCTGGAATCCAGTGCCCGTCGCCCGAGAAGGAGGACTTGGAGGCCTTCCTTCGGGATTTGGGCTATCCGTTC
AGTGAGCACACTGACTCGCCCACTTACAAGACCTTCTTGCGTTCCGAATAA
Transcript >Pro_DTO377G3_2|g6352.t1
ATGTCCGACGAGGCTCCCAACGGCGCCACGACGCCCGTCACTCCCAAGACGAGCGGGCTTGCGCTGACTGAGTAT
ACCGCCGCTCCGACGCCGCCCTCTGAACGTGAGCAAAGGACCCCAGGATTGCCTCCTAATTGGGGAATTCCCGAA
GCTTTTCTGCTTCCCAACGGCTACCCAGATTATCTCCGGTTGATTTTGACGTCACGAGTTTACGATGTTATTGAA
GAAAGCCCTCTTACCCATGCTGTCAACCTGAGTAGCCGGTTGGAAAGCCGGGTGCTTCTCAAGCGCGAGGATCTG
CTTCCGGTGTTCAGCTTCAAGCTCCGTGGCGCATACAACAAGATGGCTCATTTGAGTGATGAGCAGCGCTGGAAG
GGCGTTGTTGCTTGCTCTGCTGGAAATCATGCTCAAGGTGTGGCCTTTTCTGCCCGCAAGCTGAGAATCCCCGCT
ACCATCGTCATGCCCTCCGGCACCCCTGCCATTAAACACCTGAATGTTGCTCGCTTGGGAGGAAGTGTGGTTCTT
CACGGAATGGACTTCGATGCTGCCAAAGATGAGGCTCACCGATTAGAGAAGCTGCATGGTCTAACGAACATTCCA
CCGTTCGACGACCCTTATGTCATTGCTGGCCAAGGTACCATCGGCATGGAGCTTCTGCGCCAAGCAAACTTGGAC
AAGCTCGAGGCAGTCTTCTGTGCTGTTGGAGGAGGTGGTCTTATTGCCGGCATCGGAGTTTACCTCAAGCGCATC
GCACCCCAGGTGAAGGTCATCGGTGTCGAGGCTTACGATGCCAACGCTATGGCCCAGTCCCTCGATGCGGGTAAA
CGAGTCTTCCTCAAGGAGGTTGGGCTCTTTGCAGATGGTGCAGCAGTGAAGTCTGTTGGCGAGGAAACTTGGCGT
CTCAGCCGGGAGGTCATCGACGAAGTCATCCAGGTGTCCACCGACGAGACCTGCGCGGCTATCAAGGACGCCTTC
GAGGACACCCGGTCCATCGTTGAGCCTGCCGGTGCTCTCGCTCTTGCCGGTCTCAAGAAGTATATTGCCAAGAAC
CCTAGCCCTGACCCCAACCGCGAGCTTATTGCCATTACCTCCGGTGCTAATATGGACTTCGACCGTCTGCGGTTT
GTTGCTGAGCGCGCAGCTCTCGGTGAGAAGAAGGAGGCTCTTCTTAGCGTGAAGATCCCCGAGAAGCCCGGCGCG
TTCGCCAAGCTCGTTGAAACTGTCCTGCCCCACGCCGTTACCGCGTTCAACTACCGGTACGCCCGCGCAGATTCG
GCTGATGTGCTGATGGGTATCTCGCTATCTGCCTCTACTGGCCGCGAAGACTTGGCCAAGATCATGGGAGAGCTG
GAAAAGGCCGGCATGAGCTGCCGGGATTTGAGTGATGACGAACTTGCCAAGCGCCATGTGCGCTTCCTCGTTGGC
GGCCGCTGCGAGGCTGCCGATGAGCGCATCTTCATGTTCGAGTTTCCCGAGCGTCCAGGTGCTCTCGCCAAGTTC
CTCACCACCCTTCGTCCGGAACAGAATATCTCTCTGTTCCACTATCGAAACTACGGCGGTGATGTCGGCAAGGTT
CTAGCTGGAATCCAGTGCCCGTCGCCCGAGAAGGAGGACTTGGAGGCCTTCCTTCGGGATTTGGGCTATCCGTTC
AGTGAGCACACTGACTCGCCCACTTACAAGACCTTCTTGCGTTCCGAATAA
Gene >Pro_DTO377G3_2|g6352.t1
ATGTCCGACGAGGCTCCCAACGGCGCCACGACGCCCGTCACTCCCAAGACGAGCGGGCTTGCGCTGACTGAGTAT
ACCGCCGCTCCGACGCCGCCCTCTGAACGTGAGCAAAGGACCCCAGGATTGCCTCCTAATTGGGGAATTCCCGAA
GCTTTTCTGCTTCCCAACGGCTACCCAGATGTAATTCAAGTTCTGCAATACCCCACTGAATCTTCAAATTCTAAC
ACTGCCCCGCCATTCTAGTATCTCCGGTTGATTTTGACGTCACGAGTTTACGATGTTATTGAAGAAAGCCCTCTT
ACCCATGCTGTCAACCTGAGTAGCCGGTTGGAAAGCCGGGTGCTTCTCAAGCGCGAGGATCTGCTTCCGGTGTTC
AGCTTCAAGCTCCGTGGCGCATACAACAAGATGGCTCATTTGAGTGATGAGCAGCGCTGGAAGGGCGTTGTTGCT
TGCTCTGCTGGTGAGTTTATAACTGGTAGATAATGCAAAATGGAAACGCCTTCTGACTCACTCGACATAGGAAAT
CATGCTCAAGGTGTGGCCTTTTCTGCCCGCAAGCTGAGAATCCCCGCTACCATCGTCATGCCCTCCGGCACCCCT
GCCATTAAACACCTGAATGTTGCTCGCTTGGGAGGAAGTGTGGTTCTTCACGGAATGGACTTCGATGCTGCCAAA
GATGAGGCTCACCGATTAGAGAAGCTGCATGGTCTAACGAACATTCCACCGTTCGACGACCCTTATGTCATTGCT
GGCCAAGGTACCATCGGCATGGAGCTTCTGCGCCAAGCAAACTTGGACAAGCTCGAGGCAGTCTTCTGTGCTGTT
GGAGGAGGTGGTCTTATTGCCGGCATCGGAGTTTACCTCAAGCGCATCGCACCCCAGGTGAAGGTCATCGGTGTC
GAGGCTTACGATGCCAACGCTATGGCCCAGTCCCTCGATGCGGGTAAACGAGTCTTCCTCAAGGAGGTTGGGCTC
TTTGCAGATGGTGCAGCAGTGAAGTCTGTTGGCGAGGAAACTTGGCGTCTCAGCCGGGAGGTCATCGACGAAGTC
ATCCAGGTGTCCACCGACGAGACCTGCGCGGCTATCAAGGACGCCTTCGAGGACACCCGGTCCATCGTTGAGCCT
GCCGGTGCTCTCGCTCTTGCCGGTCTCAAGAAGTATATTGCCAAGAACCCTAGCCCTGACCCCAACCGCGAGCTT
ATTGCCATTACCTCCGGTGCTAATATGGACTTCGACCGTCTGCGGTTTGTTGCTGAGCGCGCAGCTCTCGGTGAG
AAGAAGGAGGCTCTTCTTAGCGTGAAGATCCCCGAGAAGCCCGGCGCGTTCGCCAAGCTCGTTGAAACTGTCCTG
CCCCACGCCGTTACCGCGTTCAACTACCGGTACGCCCGCGCAGATTCGGCTGATGTGCTGATGGGTATCTCGCTA
TCTGCCTCTACTGGCCGCGAAGACTTGGCCAAGATCATGGGAGAGCTGGAAAAGGCCGGCATGAGCTGCCGGGAT
TTGAGTGATGACGAACTTGCCAAGCGCCATGTGCGCTTCCTCGTTGGCGGCCGCTGCGAGGCTGCCGATGAGCGC
ATCTTCATGTTCGAGTTTCCCGAGCGTCCAGGTGCTCTCGCCAAGTTCCTCACCACCCTTCGTCCGGAACAGAAT
ATCTCTCTGTTCCACTATCGAAACTACGGCGGTGATGTCGGCAAGGTTCTAGCTGGAATCCAGTGCCCGTCGCCC
GAGAAGGAGGACTTGGAGGCCTTCCTTCGGGATTTGGGCTATCCGTTCAGTGAGCACACTGACTCGCCCACTTAC
AAGACCTTCTTGCGTTCCGAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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