Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6351.t1
Gene name
Locationscaffold_16:578048..578777
Strand-
Gene length (bp)729
Transcript length (bp)540
Coding sequence length (bp)540
Protein length (aa) 180

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04588 HIG_1_N Hypoxia induced protein conserved region 4.1E-27 32 83

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.45

Transmembrane Domains

Domain # Start End Length
1 70 87 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6351.t1
MNREPVPSSFDEENPQFTEETGVQKFKRRLKEEPLVPLGCAATCYALYRAYRSMKIGDSVEMNRMFRARIYAQAF
TLVALVAGGMYFKTERQQRREFDQAVELRKKQEKRDAWLRELEIRDKEDREWRERHAAIDAAAKEAGNKPAPRSE
SEAARSSIEPADEKSIGVMDAVRALISRN*
Coding >Pro_DTO377G3_2|g6351.t1
ATGAACCGGGAACCTGTTCCTTCGTCTTTTGACGAGGAGAACCCTCAATTTACAGAAGAGACCGGCGTTCAAAAA
TTCAAACGACGTCTCAAGGAAGAACCCCTGGTTCCACTTGGATGCGCCGCAACATGTTATGCCCTCTACCGCGCC
TACCGGTCGATGAAAATCGGTGACTCGGTTGAAATGAACCGAATGTTCCGAGCCCGTATCTACGCACAAGCCTTC
ACACTAGTCGCCCTAGTCGCCGGCGGAATGTACTTCAAGACGGAGCGGCAACAGCGCCGGGAATTCGACCAAGCA
GTGGAACTTCGGAAGAAGCAAGAAAAGCGTGATGCGTGGTTGCGCGAGCTAGAGATTCGTGATAAGGAGGATCGC
GAGTGGAGGGAGCGTCACGCTGCTATTGACGCTGCGGCCAAGGAGGCCGGGAATAAACCGGCGCCTCGTTCTGAG
TCTGAAGCGGCACGGTCATCGATCGAGCCTGCGGATGAGAAGTCTATTGGGGTTATGGATGCCGTCAGGGCTCTT
ATCTCGCGGAACTGA
Transcript >Pro_DTO377G3_2|g6351.t1
ATGAACCGGGAACCTGTTCCTTCGTCTTTTGACGAGGAGAACCCTCAATTTACAGAAGAGACCGGCGTTCAAAAA
TTCAAACGACGTCTCAAGGAAGAACCCCTGGTTCCACTTGGATGCGCCGCAACATGTTATGCCCTCTACCGCGCC
TACCGGTCGATGAAAATCGGTGACTCGGTTGAAATGAACCGAATGTTCCGAGCCCGTATCTACGCACAAGCCTTC
ACACTAGTCGCCCTAGTCGCCGGCGGAATGTACTTCAAGACGGAGCGGCAACAGCGCCGGGAATTCGACCAAGCA
GTGGAACTTCGGAAGAAGCAAGAAAAGCGTGATGCGTGGTTGCGCGAGCTAGAGATTCGTGATAAGGAGGATCGC
GAGTGGAGGGAGCGTCACGCTGCTATTGACGCTGCGGCCAAGGAGGCCGGGAATAAACCGGCGCCTCGTTCTGAG
TCTGAAGCGGCACGGTCATCGATCGAGCCTGCGGATGAGAAGTCTATTGGGGTTATGGATGCCGTCAGGGCTCTT
ATCTCGCGGAACTGA
Gene >Pro_DTO377G3_2|g6351.t1
ATGAACCGGGAACCTGTTCCTTCGTCTTTTGACGAGGAGAACCCGTATGTATCACACATTAGCCGCGTGCTCCGC
AAGCGGAACCCGACAATGCCGCAGAGGAAGCGAAGGGAAGGCTCGTCTGCTAACACTCGGTCTCGGACAGTCAAT
TTACAGAAGAGACCGGCGTTCAAAAATTCAAACGACGTCTCAAGGAAGAACCCCTGGTTCCACTTGGTACGAAAT
CCATCTGCACAAGCCCTCATCTTGACTTTGGAATTTCCCTCCCAACATTGAAAACCAAAACTAATACATACTGCC
ACAGGATGCGCCGCAACATGTTATGCCCTCTACCGCGCCTACCGGTCGATGAAAATCGGTGACTCGGTTGAAATG
AACCGAATGTTCCGAGCCCGTATCTACGCACAAGCCTTCACACTAGTCGCCCTAGTCGCCGGCGGAATGTACTTC
AAGACGGAGCGGCAACAGCGCCGGGAATTCGACCAAGCAGTGGAACTTCGGAAGAAGCAAGAAAAGCGTGATGCG
TGGTTGCGCGAGCTAGAGATTCGTGATAAGGAGGATCGCGAGTGGAGGGAGCGTCACGCTGCTATTGACGCTGCG
GCCAAGGAGGCCGGGAATAAACCGGCGCCTCGTTCTGAGTCTGAAGCGGCACGGTCATCGATCGAGCCTGCGGAT
GAGAAGTCTATTGGGGTTATGGATGCCGTCAGGGCTCTTATCTCGCGGAACTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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