Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6349.t1
Gene name
Locationscaffold_16:576559..577196
Strand-
Gene length (bp)637
Transcript length (bp)525
Coding sequence length (bp)525
Protein length (aa) 175

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01284 MARVEL Membrane-associating domain 1.2E-13 7 127

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0005575 cellular_component No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.5

Transmembrane Domains

Domain # Start End Length
1 7 29 22
2 39 61 22
3 74 96 22
4 111 133 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6349.t1
MLSWINPLRIVQAILSLATIGLTAYEIASLYDKWSYSNVVYYMLFNGCWTTAIAVPYLGLAPLRFPRFSHEIAIP
LIELLTGGLWLSGWIALAAMIPSPGACHYSSCHALQALIVVGAVQWATFVVTNTFAIIDLKNSRRNAKNHRDDAS
PEMSAADANTNGNTTTTATADGAV*
Coding >Pro_DTO377G3_2|g6349.t1
ATGCTTTCCTGGATCAACCCATTGCGAATCGTGCAGGCCATCCTGTCCCTAGCCACGATTGGTCTTACCGCATAT
GAAATTGCCTCTCTGTACGACAAATGGTCCTACTCGAATGTAGTCTACTACATGCTCTTCAACGGCTGCTGGACA
ACAGCCATCGCAGTCCCATACCTGGGCCTCGCACCCCTACGCTTCCCTCGCTTCTCGCATGAAATCGCAATTCCT
CTCATAGAGCTGCTCACCGGCGGCCTCTGGCTCAGCGGCTGGATCGCCTTGGCTGCAATGATTCCCTCGCCTGGC
GCATGCCACTATTCCAGCTGCCACGCCCTCCAGGCTTTGATTGTCGTCGGGGCCGTGCAATGGGCTACTTTCGTT
GTCACAAATACCTTCGCCATCATAGACCTTAAGAACTCTCGCCGCAACGCGAAGAATCACCGTGATGATGCTTCC
CCGGAGATGAGTGCTGCTGATGCGAATACCAACGGCAATACTACCACTACCGCCACTGCCGATGGGGCTGTCTAG
Transcript >Pro_DTO377G3_2|g6349.t1
ATGCTTTCCTGGATCAACCCATTGCGAATCGTGCAGGCCATCCTGTCCCTAGCCACGATTGGTCTTACCGCATAT
GAAATTGCCTCTCTGTACGACAAATGGTCCTACTCGAATGTAGTCTACTACATGCTCTTCAACGGCTGCTGGACA
ACAGCCATCGCAGTCCCATACCTGGGCCTCGCACCCCTACGCTTCCCTCGCTTCTCGCATGAAATCGCAATTCCT
CTCATAGAGCTGCTCACCGGCGGCCTCTGGCTCAGCGGCTGGATCGCCTTGGCTGCAATGATTCCCTCGCCTGGC
GCATGCCACTATTCCAGCTGCCACGCCCTCCAGGCTTTGATTGTCGTCGGGGCCGTGCAATGGGCTACTTTCGTT
GTCACAAATACCTTCGCCATCATAGACCTTAAGAACTCTCGCCGCAACGCGAAGAATCACCGTGATGATGCTTCC
CCGGAGATGAGTGCTGCTGATGCGAATACCAACGGCAATACTACCACTACCGCCACTGCCGATGGGGCTGTCTAG
Gene >Pro_DTO377G3_2|g6349.t1
ATGCTTTCCTGGATCAACCCATTGCGAATCGTGCAGGCCATCCTGTCCCTAGCCACGATTGGTCTTACCGCATAT
GGTATGTTTGACTATCCACAAAGTACTCCATGACAGCACTGACTCCATCTAGAAATTGCCTCTCTGTACGACAAA
TGGTCCTACTCGAATGTAGTCTACTACATGCTCTTCAACGGCTGCTGGACAACAGCCATCGCAGTCCCATACCTG
GGCCTCGCACCCCTACGCTTCCCTCGCTTCTCGCATGAAATCGCAATTCCTCTCATAGAGCTGCTCACCGGCGGC
CTCTGGCTCAGCGGCTGGATCGCCTTGGCTGCAATGATTCCCTCGCCTGGCGCATGCCACTATTCCAGCTGCCAC
GCCCTCCAGGCTTTGATTGTCGTCGGGGCCGTGCAATGGTAAAACAGATGCCTAAGGATTGACGCATGCATACAT
TATCTAACCTGTGGTTCTGAGCAGGGCTACTTTCGTTGTCACAAATACCTTCGCCATCATAGACCTTAAGAACTC
TCGCCGCAACGCGAAGAATCACCGTGATGATGCTTCCCCGGAGATGAGTGCTGCTGATGCGAATACCAACGGCAA
TACTACCACTACCGCCACTGCCGATGGGGCTGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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