Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6322.t1
Gene name
Locationscaffold_16:518049..519004
Strand-
Gene length (bp)955
Transcript length (bp)894
Coding sequence length (bp)894
Protein length (aa) 298

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04193 PQ-loop PQ loop repeat 1.7E-10 60 119
PF04193 PQ-loop PQ loop repeat 1.5E-09 175 230

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

Domain # Start End Length
1 53 75 22
2 88 110 22
3 120 142 22
4 147 169 22
5 232 254 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6322.t1
MDILQNSLITPLQPYLAPIVSAIPEPVHDAVVSLIGKSCHGALLVDLDLTKDPACTSLAISKALGIAIVGASAVV
KIPQILKLISSRSSAGVSFVSYALETASLLITLSYGVRNQFPFSTYGETALIAVQDIAIGILVLNYAGRSAAAAA
FIAVVAASIYALLFDQTLVDAHTMSYLQAGAGALGVASKAPQIYTIWREGGTGQLSAFTVFNYLIGSMSRIFTTL
QEVDDKFILYGFIGGFSLNVILAIQMLWYWNAPTPKQKAAPRAKVAEKASSAQSTGASPRPTVKTPTTRRRG*
Coding >Pro_DTO377G3_2|g6322.t1
ATGGATATCCTTCAGAACTCCCTGATTACGCCTCTTCAGCCTTATTTGGCGCCTATTGTCTCAGCCATCCCTGAA
CCAGTGCATGATGCCGTCGTGTCCTTGATTGGAAAGTCTTGCCACGGTGCACTATTGGTCGATCTCGATCTCACT
AAAGACCCTGCCTGCACATCACTCGCCATCTCCAAGGCCCTCGGCATTGCCATCGTCGGTGCCAGTGCAGTCGTC
AAAATCCCACAGATTCTGAAGCTGATCAGCTCCCGCTCATCGGCCGGTGTCTCATTCGTATCTTACGCCCTCGAA
ACTGCCAGCTTGCTCATCACTCTCTCGTACGGCGTGCGCAACCAGTTCCCATTCAGCACCTATGGCGAGACTGCT
CTCATCGCCGTCCAGGATATTGCTATCGGTATTCTGGTCTTGAACTATGCCGGACGCTCTGCCGCTGCTGCGGCT
TTCATTGCTGTCGTAGCTGCCAGCATTTATGCGCTGTTGTTCGACCAGACCCTGGTGGATGCGCATACTATGTCA
TACCTGCAGGCTGGTGCGGGTGCTCTAGGTGTTGCTAGCAAGGCGCCTCAAATCTACACCATCTGGCGCGAGGGA
GGAACCGGACAGCTCAGTGCATTCACAGTGTTCAACTACCTCATCGGATCCATGTCCCGAATCTTCACGACCCTC
CAGGAAGTCGACGACAAGTTTATCCTCTACGGTTTCATTGGTGGCTTCTCTCTCAATGTGATCCTCGCAATCCAG
ATGCTCTGGTACTGGAATGCACCGACGCCCAAGCAGAAGGCCGCTCCTCGCGCAAAGGTAGCTGAGAAGGCATCA
TCGGCCCAGAGCACGGGAGCGTCCCCGAGACCTACCGTCAAGACACCCACTACTCGCCGACGGGGTTAG
Transcript >Pro_DTO377G3_2|g6322.t1
ATGGATATCCTTCAGAACTCCCTGATTACGCCTCTTCAGCCTTATTTGGCGCCTATTGTCTCAGCCATCCCTGAA
CCAGTGCATGATGCCGTCGTGTCCTTGATTGGAAAGTCTTGCCACGGTGCACTATTGGTCGATCTCGATCTCACT
AAAGACCCTGCCTGCACATCACTCGCCATCTCCAAGGCCCTCGGCATTGCCATCGTCGGTGCCAGTGCAGTCGTC
AAAATCCCACAGATTCTGAAGCTGATCAGCTCCCGCTCATCGGCCGGTGTCTCATTCGTATCTTACGCCCTCGAA
ACTGCCAGCTTGCTCATCACTCTCTCGTACGGCGTGCGCAACCAGTTCCCATTCAGCACCTATGGCGAGACTGCT
CTCATCGCCGTCCAGGATATTGCTATCGGTATTCTGGTCTTGAACTATGCCGGACGCTCTGCCGCTGCTGCGGCT
TTCATTGCTGTCGTAGCTGCCAGCATTTATGCGCTGTTGTTCGACCAGACCCTGGTGGATGCGCATACTATGTCA
TACCTGCAGGCTGGTGCGGGTGCTCTAGGTGTTGCTAGCAAGGCGCCTCAAATCTACACCATCTGGCGCGAGGGA
GGAACCGGACAGCTCAGTGCATTCACAGTGTTCAACTACCTCATCGGATCCATGTCCCGAATCTTCACGACCCTC
CAGGAAGTCGACGACAAGTTTATCCTCTACGGTTTCATTGGTGGCTTCTCTCTCAATGTGATCCTCGCAATCCAG
ATGCTCTGGTACTGGAATGCACCGACGCCCAAGCAGAAGGCCGCTCCTCGCGCAAAGGTAGCTGAGAAGGCATCA
TCGGCCCAGAGCACGGGAGCGTCCCCGAGACCTACCGTCAAGACACCCACTACTCGCCGACGGGGTTAG
Gene >Pro_DTO377G3_2|g6322.t1
ATGGATATCCTTCAGAACTCCCTGATTACGCCTCTTCAGCCTTATTTGGCGCCTATTGTCTCAGCCATCCCTGAA
CCAGTGCATGATGCCGTCGTGTCCTTGATTGGAAAGTCTTGCCACGGTGCACTATTGGTCGATCTCGATCTCACT
AAAGACCCTGCCTGCACATCACTCGCCATCTCCAAGGCCCTCGGCATTGCCATCGTCGGTGCCAGTGCAGTCGTC
AAAATCCCACAGATTCTGAAGCTGATCAGCTCCCGCTCATCGGCCGGTGTCTCATTCGTATCTTACGCCCTCGAA
ACTGCCAGCTTGCTCATCACTCTCTCGTACGGCGTGCGCAACCAGTTCCCATTCAGCACCTATGGCGAGACTGCT
CTCATCGCCGTCCAGGATATTGCTATCGGTATTCTGGTCTTGAACTATGCCGGACGCTCTGCCGCTGCTGCGGCT
TTCATTGCTGTCGTAGCTGCCAGCATTTATGCGCTGTTGTTCGACCAGACCCTGGTGGATGCGCATACTATGTCA
TACCTGCAGGCTGGTGCGGGTGCTCTAGGTGTTGCTAGCAAGGCGCCTCAAATCTACACCATCTGGCGCGAGGGA
GGAACCGGACAGCTCAGTGCATTCACAGTACGATTCTCTTTCCTTTCAACCTGATCCCAGTCCAAACACTAATTA
TTTCTTTAATCAGGTGTTCAACTACCTCATCGGATCCATGTCCCGAATCTTCACGACCCTCCAGGAAGTCGACGA
CAAGTTTATCCTCTACGGTTTCATTGGTGGCTTCTCTCTCAATGTGATCCTCGCAATCCAGATGCTCTGGTACTG
GAATGCACCGACGCCCAAGCAGAAGGCCGCTCCTCGCGCAAAGGTAGCTGAGAAGGCATCATCGGCCCAGAGCAC
GGGAGCGTCCCCGAGACCTACCGTCAAGACACCCACTACTCGCCGACGGGGTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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