Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6317.t1
Gene name
Locationscaffold_16:508320..509702
Strand+
Gene length (bp)1382
Transcript length (bp)1212
Coding sequence length (bp)1212
Protein length (aa) 404

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF20511 PMI_typeI_cat Phosphomannose isomerase type I, catalytic domain 1.1E-36 6 150

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 64 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6317.t1
MADAVVQLRCGVKNDDWGKKGKESMVAQLWSKTPKNGPIDDSKHYSEMWMGTYPSNPSHLLSTGEHLGDYLKKHP
ELVGKSVHDRWGAEIPFLPKILSFSKALPLQIHPDQKLATQLHKEDPKKYGDPMHKPEIAIALSKFELFAGWKPL
KDIQSLFELNHLAKYMPKSGQFNDEDLRQVCKALLSAPAKEIAQTMKDLQAIPESQFGAHTYIPSLLGRLAKQYG
EGDNGNLVAALLMNYMTLGPGDSVFVPQDSIHAYLEGDIVECMARSDNVINTGFCPAAERDSVELFGQALSFVPH
SSEDSLLPRKKSDKGLNGKTDVYAPPISEFSVLCTTLGAGESETHKAILGPSLMIVTKGCGQMKFPENKTAELKE
GYVFFVGQGVALDFVTDKGMAVFRAYAE*
Coding >Pro_DTO377G3_2|g6317.t1
ATGGCAGACGCAGTAGTCCAACTTCGGTGTGGTGTCAAGAACGATGACTGGGGGAAGAAAGGAAAAGAGTCGATG
GTAGCTCAGCTATGGTCGAAAACCCCCAAAAATGGACCAATTGACGACTCCAAGCACTATTCAGAAATGTGGATG
GGCACGTATCCTTCAAACCCATCCCACTTACTTTCCACGGGCGAACACCTTGGGGACTATCTGAAGAAGCACCCT
GAGCTAGTGGGCAAGTCCGTCCACGACCGATGGGGTGCCGAGATTCCATTTCTGCCAAAGATTCTATCTTTCAGC
AAAGCGCTACCCTTACAAATCCATCCAGACCAGAAACTCGCTACACAATTGCACAAAGAAGATCCTAAGAAGTAT
GGCGATCCAATGCACAAGCCGGAGATTGCAATCGCACTCTCAAAATTCGAGCTCTTCGCCGGCTGGAAACCCCTG
AAAGACATTCAATCGCTGTTCGAGTTGAACCACCTGGCAAAGTACATGCCCAAATCCGGACAATTCAACGACGAG
GACCTACGCCAAGTATGCAAGGCTTTACTCAGCGCACCAGCCAAAGAAATCGCACAGACAATGAAAGATCTACAA
GCCATCCCGGAATCCCAGTTCGGCGCACACACCTACATCCCCAGCCTCCTTGGTCGTCTGGCAAAGCAATACGGC
GAAGGCGACAACGGAAATCTGGTCGCCGCCCTGCTGATGAACTACATGACCCTAGGACCGGGAGATTCCGTCTTC
GTCCCGCAAGACAGCATCCACGCCTACCTCGAGGGTGATATTGTGGAGTGCATGGCGCGGTCGGATAACGTCATC
AACACGGGTTTCTGCCCGGCCGCAGAACGCGACAGCGTCGAGTTGTTCGGGCAGGCTCTCAGCTTTGTACCGCAT
AGTTCAGAGGATTCGCTGTTGCCGCGTAAAAAGAGCGACAAGGGCTTGAATGGTAAGACGGATGTCTATGCACCG
CCCATCAGCGAATTCTCGGTGCTGTGTACTACTCTCGGCGCTGGGGAAAGCGAGACGCACAAGGCTATTCTGGGG
CCGAGTCTAATGATTGTTACGAAGGGTTGTGGTCAGATGAAATTCCCCGAGAATAAAACCGCTGAGTTGAAGGAG
GGATATGTTTTCTTTGTGGGGCAGGGTGTTGCGCTGGACTTTGTGACCGACAAGGGCATGGCTGTTTTCCGGGCG
TATGCGGAGTAA
Transcript >Pro_DTO377G3_2|g6317.t1
ATGGCAGACGCAGTAGTCCAACTTCGGTGTGGTGTCAAGAACGATGACTGGGGGAAGAAAGGAAAAGAGTCGATG
GTAGCTCAGCTATGGTCGAAAACCCCCAAAAATGGACCAATTGACGACTCCAAGCACTATTCAGAAATGTGGATG
GGCACGTATCCTTCAAACCCATCCCACTTACTTTCCACGGGCGAACACCTTGGGGACTATCTGAAGAAGCACCCT
GAGCTAGTGGGCAAGTCCGTCCACGACCGATGGGGTGCCGAGATTCCATTTCTGCCAAAGATTCTATCTTTCAGC
AAAGCGCTACCCTTACAAATCCATCCAGACCAGAAACTCGCTACACAATTGCACAAAGAAGATCCTAAGAAGTAT
GGCGATCCAATGCACAAGCCGGAGATTGCAATCGCACTCTCAAAATTCGAGCTCTTCGCCGGCTGGAAACCCCTG
AAAGACATTCAATCGCTGTTCGAGTTGAACCACCTGGCAAAGTACATGCCCAAATCCGGACAATTCAACGACGAG
GACCTACGCCAAGTATGCAAGGCTTTACTCAGCGCACCAGCCAAAGAAATCGCACAGACAATGAAAGATCTACAA
GCCATCCCGGAATCCCAGTTCGGCGCACACACCTACATCCCCAGCCTCCTTGGTCGTCTGGCAAAGCAATACGGC
GAAGGCGACAACGGAAATCTGGTCGCCGCCCTGCTGATGAACTACATGACCCTAGGACCGGGAGATTCCGTCTTC
GTCCCGCAAGACAGCATCCACGCCTACCTCGAGGGTGATATTGTGGAGTGCATGGCGCGGTCGGATAACGTCATC
AACACGGGTTTCTGCCCGGCCGCAGAACGCGACAGCGTCGAGTTGTTCGGGCAGGCTCTCAGCTTTGTACCGCAT
AGTTCAGAGGATTCGCTGTTGCCGCGTAAAAAGAGCGACAAGGGCTTGAATGGTAAGACGGATGTCTATGCACCG
CCCATCAGCGAATTCTCGGTGCTGTGTACTACTCTCGGCGCTGGGGAAAGCGAGACGCACAAGGCTATTCTGGGG
CCGAGTCTAATGATTGTTACGAAGGGTTGTGGTCAGATGAAATTCCCCGAGAATAAAACCGCTGAGTTGAAGGAG
GGATATGTTTTCTTTGTGGGGCAGGGTGTTGCGCTGGACTTTGTGACCGACAAGGGCATGGCTGTTTTCCGGGCG
TATGCGGAGTAA
Gene >Pro_DTO377G3_2|g6317.t1
ATGGCAGACGCAGTAGTCCAACTTCGGTGTGGTGTCAAGGCAAGTATATTTTGCTAACATATCTATTCTCGATTC
TGATCTAACCCGGTTTAATAGAACGATGACTGGGGGAAGAAAGGAAAAGAGTCGATGGTAGCTCAGCTATGGTCG
AAAACCCCCAAAAATGGACCAATTGACGACTCCAAGCACTATTCAGAAGTAAGCTTTTCGGAATTATTGAACCAA
GCACAGTCATGTTGACCTTCGAGCAGATGTGGATGGGCACGTATCCTTCAAACCCATCCCACTTACTTTCCACGG
GCGAACACCTTGGGGACTATCTGAAGAAGCACCCTGAGCTAGTGGGCAAGTCCGTCCACGACCGATGGGGTGCCG
AGATTCCATTTCTGCCAAAGGCAAGCGCAAAATACAAGAATTATAGTGTGTGGCCATGTAGATAACTAACTTGGA
TCTAGATTCTATCTTTCAGCAAAGCGCTACCCTTACAAATCCATCCAGACCAGAAACTCGCTACACAATTGCACA
AAGAAGATCCTAAGAAGTATGGCGATCCAATGCACAAGCCGGAGATTGCAATCGCACTCTCAAAATTCGAGCTCT
TCGCCGGCTGGAAACCCCTGAAAGACATTCAATCGCTGTTCGAGTTGAACCACCTGGCAAAGTACATGCCCAAAT
CCGGACAATTCAACGACGAGGACCTACGCCAAGTATGCAAGGCTTTACTCAGCGCACCAGCCAAAGAAATCGCAC
AGACAATGAAAGATCTACAAGCCATCCCGGAATCCCAGTTCGGCGCACACACCTACATCCCCAGCCTCCTTGGTC
GTCTGGCAAAGCAATACGGCGAAGGCGACAACGGAAATCTGGTCGCCGCCCTGCTGATGAACTACATGACCCTAG
GACCGGGAGATTCCGTCTTCGTCCCGCAAGACAGCATCCACGCCTACCTCGAGGGTGATATTGTGGAGTGCATGG
CGCGGTCGGATAACGTCATCAACACGGGTTTCTGCCCGGCCGCAGAACGCGACAGCGTCGAGTTGTTCGGGCAGG
CTCTCAGCTTTGTACCGCATAGTTCAGAGGATTCGCTGTTGCCGCGTAAAAAGAGCGACAAGGGCTTGAATGGTA
AGACGGATGTCTATGCACCGCCCATCAGCGAATTCTCGGTGCTGTGTACTACTCTCGGCGCTGGGGAAAGCGAGA
CGCACAAGGCTATTCTGGGGCCGAGTCTAATGATTGTTACGAAGGGTTGTGGTCAGATGAAATTCCCCGAGAATA
AAACCGCTGAGTTGAAGGAGGGATATGTTTTCTTTGTGGGGCAGGGTGTTGCGCTGGACTTTGTGACCGACAAGG
GCATGGCTGTTTTCCGGGCGTATGCGGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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