Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6303.t1
Gene name
Locationscaffold_16:473291..475152
Strand-
Gene length (bp)1861
Transcript length (bp)1659
Coding sequence length (bp)1659
Protein length (aa) 553

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain 5.4E-41 384 540
PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain 7.8E-22 277 372
PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain 1.0E-18 148 273
PF00173 Cyt-b5 Cytochrome b5-like Heme/Steroid binding domain 1.0E-18 6 77
PF08028 Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain 5.6E-08 402 523

GO

GO Term Description Terminal node
GO:0055114 oxidation-reduction process Yes
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0008152 metabolic process No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0048037 cofactor binding No
GO:0050662 coenzyme binding No
GO:0003824 catalytic activity No
GO:0016491 oxidoreductase activity No
GO:1901265 nucleoside phosphate binding No
GO:1901363 heterocyclic compound binding No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:0036094 small molecule binding No
GO:0097159 organic cyclic compound binding No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6303.t1
MAKTFSKEDVASHSKGDSPWVIIDEDVYDVSKFQDEHPGGKKILQRVAGKDASKQFWKYHNEGILKKYKGQLQIG
SLDTKKTAPAPSAPSAPPAPAPTPKKAAPEPKPTISESSVTPPAIGAPQDPYGELIPFADPSWYQGYASPYFSES
HAALRDEVRQWVESEIEPYVTEWDEAKEVPAHIYKQMGERGYLAGLLGVHFPQKHTPYRVKSVSADRWDLFHEML
LTDELSRVGSGGLVWNLIGGYGIGCPPLVKFGKKPLVDRILPGILAGDKRICLAITEPDAGSDVANLGCEAKLTE
DGKHYIVNGEKKWITNGIYADYFTTAVRTGKDGMNGLSVLLIEREAGGVSTRRMDCQGVWSSGTTYVTFEDVKVP
VENLIGKENQGFKVIMTNFNHERIGIVIQCVRFSRVCYEESMKYAHKRKTFGKRLIDHPVIRMKLAHMARQIEAT
YNWLENIIFQCQSMEETEAMLKLGGAIAGLKAQSTQCFEFCAREASQIFGGLSYSRGGQGGKIERLYRDVRAYAI
PGGSEEIMLDLSMRQSLRVHGMFGMKL*
Coding >Pro_DTO377G3_2|g6303.t1
ATGGCAAAGACATTTAGCAAAGAGGATGTCGCCTCGCATAGCAAGGGTGACAGTCCCTGGGTCATTATCGATGAA
GATGTCTACGATGTTTCCAAGTTCCAAGATGAGCACCCTGGTGGAAAGAAGATTCTCCAGCGAGTTGCGGGAAAG
GACGCTTCGAAACAGTTCTGGAAATACCACAACGAGGGCATTCTGAAGAAGTACAAGGGTCAGCTGCAGATCGGT
TCGTTGGATACAAAGAAGACGGCACCGGCACCCTCGGCACCCTCGGCACCCCCGGCACCAGCGCCAACCCCGAAA
AAGGCTGCCCCCGAGCCGAAACCTACCATTTCTGAGTCTTCCGTGACACCACCTGCCATCGGCGCTCCCCAGGAC
CCTTATGGAGAGTTGATCCCATTCGCCGACCCCTCGTGGTACCAAGGTTATGCATCCCCCTACTTCAGTGAATCC
CATGCCGCACTGCGAGACGAGGTCCGCCAGTGGGTCGAGTCCGAGATCGAGCCATATGTGACCGAATGGGACGAG
GCCAAGGAAGTGCCCGCTCACATCTACAAGCAGATGGGCGAGCGGGGCTACCTGGCTGGACTGCTGGGTGTCCAT
TTCCCCCAGAAGCACACCCCATACCGCGTGAAGTCTGTGTCAGCAGACCGGTGGGATTTGTTCCACGAGATGCTT
CTGACCGACGAGCTGTCGCGTGTCGGCAGCGGTGGTCTGGTGTGGAACCTGATCGGTGGCTACGGAATTGGCTGC
CCGCCATTGGTCAAGTTCGGCAAGAAGCCCCTCGTCGACCGAATCCTGCCGGGTATCTTGGCCGGCGACAAGCGC
ATTTGCCTCGCCATCACCGAGCCCGATGCGGGTAGTGACGTCGCAAACTTGGGTTGCGAGGCCAAGCTCACCGAG
GACGGCAAGCACTACATTGTCAACGGCGAGAAGAAGTGGATCACCAACGGTATCTACGCTGATTATTTCACGACC
GCTGTGCGCACCGGCAAGGATGGCATGAACGGCCTCAGCGTGCTGCTTATAGAGCGTGAAGCCGGTGGCGTTAGC
ACCCGACGCATGGACTGCCAGGGTGTGTGGTCTAGCGGTACGACCTATGTCACATTCGAGGATGTCAAGGTTCCC
GTGGAGAACCTGATCGGCAAGGAGAACCAGGGCTTCAAGGTTATCATGACAAACTTCAATCACGAGCGTATCGGC
ATTGTGATCCAGTGCGTGCGCTTCTCGCGCGTCTGCTATGAGGAGTCCATGAAATACGCACATAAGCGCAAAACC
TTCGGCAAGCGTCTCATCGACCACCCGGTTATTCGCATGAAACTCGCCCATATGGCTCGCCAGATCGAGGCCACC
TACAACTGGCTTGAGAACATCATCTTCCAGTGTCAGTCTATGGAGGAGACCGAGGCTATGCTCAAGCTCGGCGGT
GCCATTGCTGGATTGAAGGCGCAGTCAACGCAATGCTTTGAGTTCTGCGCTCGCGAGGCTAGTCAGATCTTTGGT
GGTTTAAGTTACAGCCGCGGCGGTCAGGGCGGTAAGATCGAGAGACTGTACCGTGATGTGCGTGCCTATGCTATC
CCCGGTGGTAGCGAGGAGATTATGCTTGATTTGAGTATGCGCCAGAGTTTGCGTGTTCACGGCATGTTTGGCATG
AAGCTATAA
Transcript >Pro_DTO377G3_2|g6303.t1
ATGGCAAAGACATTTAGCAAAGAGGATGTCGCCTCGCATAGCAAGGGTGACAGTCCCTGGGTCATTATCGATGAA
GATGTCTACGATGTTTCCAAGTTCCAAGATGAGCACCCTGGTGGAAAGAAGATTCTCCAGCGAGTTGCGGGAAAG
GACGCTTCGAAACAGTTCTGGAAATACCACAACGAGGGCATTCTGAAGAAGTACAAGGGTCAGCTGCAGATCGGT
TCGTTGGATACAAAGAAGACGGCACCGGCACCCTCGGCACCCTCGGCACCCCCGGCACCAGCGCCAACCCCGAAA
AAGGCTGCCCCCGAGCCGAAACCTACCATTTCTGAGTCTTCCGTGACACCACCTGCCATCGGCGCTCCCCAGGAC
CCTTATGGAGAGTTGATCCCATTCGCCGACCCCTCGTGGTACCAAGGTTATGCATCCCCCTACTTCAGTGAATCC
CATGCCGCACTGCGAGACGAGGTCCGCCAGTGGGTCGAGTCCGAGATCGAGCCATATGTGACCGAATGGGACGAG
GCCAAGGAAGTGCCCGCTCACATCTACAAGCAGATGGGCGAGCGGGGCTACCTGGCTGGACTGCTGGGTGTCCAT
TTCCCCCAGAAGCACACCCCATACCGCGTGAAGTCTGTGTCAGCAGACCGGTGGGATTTGTTCCACGAGATGCTT
CTGACCGACGAGCTGTCGCGTGTCGGCAGCGGTGGTCTGGTGTGGAACCTGATCGGTGGCTACGGAATTGGCTGC
CCGCCATTGGTCAAGTTCGGCAAGAAGCCCCTCGTCGACCGAATCCTGCCGGGTATCTTGGCCGGCGACAAGCGC
ATTTGCCTCGCCATCACCGAGCCCGATGCGGGTAGTGACGTCGCAAACTTGGGTTGCGAGGCCAAGCTCACCGAG
GACGGCAAGCACTACATTGTCAACGGCGAGAAGAAGTGGATCACCAACGGTATCTACGCTGATTATTTCACGACC
GCTGTGCGCACCGGCAAGGATGGCATGAACGGCCTCAGCGTGCTGCTTATAGAGCGTGAAGCCGGTGGCGTTAGC
ACCCGACGCATGGACTGCCAGGGTGTGTGGTCTAGCGGTACGACCTATGTCACATTCGAGGATGTCAAGGTTCCC
GTGGAGAACCTGATCGGCAAGGAGAACCAGGGCTTCAAGGTTATCATGACAAACTTCAATCACGAGCGTATCGGC
ATTGTGATCCAGTGCGTGCGCTTCTCGCGCGTCTGCTATGAGGAGTCCATGAAATACGCACATAAGCGCAAAACC
TTCGGCAAGCGTCTCATCGACCACCCGGTTATTCGCATGAAACTCGCCCATATGGCTCGCCAGATCGAGGCCACC
TACAACTGGCTTGAGAACATCATCTTCCAGTGTCAGTCTATGGAGGAGACCGAGGCTATGCTCAAGCTCGGCGGT
GCCATTGCTGGATTGAAGGCGCAGTCAACGCAATGCTTTGAGTTCTGCGCTCGCGAGGCTAGTCAGATCTTTGGT
GGTTTAAGTTACAGCCGCGGCGGTCAGGGCGGTAAGATCGAGAGACTGTACCGTGATGTGCGTGCCTATGCTATC
CCCGGTGGTAGCGAGGAGATTATGCTTGATTTGAGTATGCGCCAGAGTTTGCGTGTTCACGGCATGTTTGGCATG
AAGCTATAA
Gene >Pro_DTO377G3_2|g6303.t1
ATGGCAAAGACATTTAGCAAAGAGGATGTCGCCTCGCATAGCAAGGGTGACAGTCCCTGGGTCATTATCGATGAA
GATGTCTACGATGTTTCCAAGTTCCAAGATGAGCACCCTGGTAAGTGAACTCATGTGTGCAAATGCAGGGAATCA
CATGTTAACACTTCTTGTTCTGAACAGGTGGAAAGAAGAGTACGTTGGTCCGAGAGCATCCGCTACGTCCGATGA
ATTCACGTTGACAGTGTATATCTAGTTCTCCAGCGAGTTGCGGGAAAGGACGCTTCGAAACAGTTCTGGAAATAC
CACAACGAGGGCATTCTGAAGAAGTACAAGGGTCAGCTGCAGATCGGTTCGTTGGATACAAAGAAGACGGCACCG
GCACCCTCGGCACCCTCGGCACCCCCGGCACCAGCGCCAACCCCGAAAAAGGCTGCCCCCGAGCCGAAACCTACC
ATTTCTGAGTCTTCCGTGACACCACCTGCCATCGGCGCTCCCCAGGACCCTTATGGAGAGTTGATCCCATTCGCC
GACCCCTCGTGGTACCAAGGTGTAAGTCTTGCTTTCGCTCTATATCATCGATCTGTGCCTTTTACGGTTGCACCG
AAGCTAATCTATATGGCGCTCATAGTATGCATCCCCCTACTTCAGTGAATCCCATGCCGCACTGCGAGACGAGGT
CCGCCAGTGGGTCGAGTCCGAGATCGAGCCATATGTGACCGAATGGGACGAGGCCAAGGAAGTGCCCGCTCACAT
CTACAAGCAGATGGGCGAGCGGGGCTACCTGGCTGGACTGCTGGGTGTCCATTTCCCCCAGAAGCACACCCCATA
CCGCGTGAAGTCTGTGTCAGCAGACCGGTGGGATTTGTTCCACGAGATGCTTCTGACCGACGAGCTGTCGCGTGT
CGGCAGCGGTGGTCTGGTGTGGAACCTGATCGGTGGCTACGGAATTGGCTGCCCGCCATTGGTCAAGTTCGGCAA
GAAGCCCCTCGTCGACCGAATCCTGCCGGGTATCTTGGCCGGCGACAAGCGCATTTGCCTCGCCATCACCGAGCC
CGATGCGGGTAGTGACGTCGCAAACTTGGGTTGCGAGGCCAAGCTCACCGAGGACGGCAAGCACTACATTGTCAA
CGGCGAGAAGAAGTGGATCACCAACGGTATCTACGCTGATTATTTCACGACCGCTGTGCGCACCGGCAAGGATGG
CATGAACGGCCTCAGCGTGCTGCTTATAGAGCGTGAAGCCGGTGGCGTTAGCACCCGACGCATGGACTGCCAGGG
TGTGTGGTCTAGCGGTACGACCTATGTCACATTCGAGGATGTCAAGGTTCCCGTGGAGAACCTGATCGGCAAGGA
GAACCAGGGCTTCAAGGTTATCATGACAAACTTCAATCACGAGCGTATCGGCATTGTGATCCAGTGCGTGCGCTT
CTCGCGCGTCTGCTATGAGGAGTCCATGAAATACGCACATAAGCGCAAAACCTTCGGCAAGCGTCTCATCGACCA
CCCGGTTATTCGCATGAAACTCGCCCATATGGCTCGCCAGATCGAGGCCACCTACAACTGGCTTGAGAACATCAT
CTTCCAGTGTCAGTCTATGGAGGAGACCGAGGCTATGCTCAAGCTCGGCGGTGCCATTGCTGGATTGAAGGCGCA
GTCAACGCAATGCTTTGAGTTCTGCGCTCGCGAGGCTAGTCAGATCTTTGGTGGTTTAAGTTACAGCCGCGGCGG
TCAGGGCGGTAAGATCGAGAGACTGTACCGTGATGTGCGTGCCTATGCTATCCCCGGTGGTAGCGAGGAGATTAT
GCTTGATTTGAGTATGCGCCAGAGTTTGCGTGTTCACGGCATGTTTGGCATGAAGCTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail