Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6303.t1
Gene name
Locationscaffold_16:473291..475152
Strand-
Gene length (bp)1861
Transcript length (bp)1659
Coding sequence length (bp)1659
Protein length (aa) 553

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00441 Acyl-CoA_dh_1 Acyl-CoA dehydrogenase, C-terminal domain 6.0E-41 384 540
PF02770 Acyl-CoA_dh_M Acyl-CoA dehydrogenase, middle domain 2.5E-22 277 372
PF02771 Acyl-CoA_dh_N Acyl-CoA dehydrogenase, N-terminal domain 3.1E-19 148 273
PF00173 Cyt-b5 Cytochrome b5-like Heme/Steroid binding domain 1.3E-18 6 77
PF08028 Acyl-CoA_dh_2 Acyl-CoA dehydrogenase, C-terminal domain 1.8E-08 401 524

GO

GO Term Description Terminal node
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:1901265 nucleoside phosphate binding No
GO:0016491 oxidoreductase activity No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:0043167 ion binding No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:0003674 molecular_function No
GO:0003824 catalytic activity No
GO:0036094 small molecule binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 47 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6303.t1
MAKTFSKEDVASHSKGDSPWVIIDEDVYDVSKFQDEHPGGKKILQRVAGKDASKQFWKYHNEGILKKYKGQLQIG
SLDTKKTAPAPSAPSAPPAPAPTPKKAAPEPKPTISESSVTPPAIGAPQDPYGELIPFADPSWYQGYASPYFSES
HAALRDEVRQWVESEIEPYVTEWDEAKEVPAHIYKQMGERGYLAGLLGVHFPQKHTPYRVKSVSADRWDLFHEML
LTDELSRVGSGGLVWNLIGGYGIGCPPLVKFGKKPLVDRILPGILAGDKRICLAITEPDAGSDVANLGCEAKLTE
DGKHYIVNGEKKWITNGIYADYFTTAVRTGKDGMNGLSVLLIEREAGGVSTRRMDCQGVWSSGTTYVTFEDVKVP
VENLIGKENQGFKVIMTNFNHERIGIVIQCVRFSRVCYEESMKYAHKRKTFGKRLIDHPVIRMKLAHMARQIEAT
YNWLENIIFQCQSMEETEAMLKLGGAIAGLKAQSTQCFEFCAREASQIFGGLSYSRGGQGGKIERLYRDVRAYAI
PGGSEEIMLDLSMRQSLRVHGMFGMKL*
Coding >Pro_DTO377G3_2|g6303.t1
ATGGCAAAGACATTTAGCAAAGAGGATGTCGCCTCGCATAGCAAGGGTGACAGTCCCTGGGTCATTATCGATGAA
GATGTCTACGATGTTTCCAAGTTCCAAGATGAGCACCCTGGTGGAAAGAAGATTCTCCAGCGAGTTGCGGGAAAG
GACGCTTCGAAACAGTTCTGGAAATACCACAACGAGGGCATTCTGAAGAAGTACAAGGGTCAGCTGCAGATCGGT
TCGTTGGATACAAAGAAGACGGCACCGGCACCCTCGGCACCCTCGGCACCCCCGGCACCAGCGCCAACCCCGAAA
AAGGCTGCCCCCGAGCCGAAACCTACCATTTCTGAGTCTTCCGTGACACCACCTGCCATCGGCGCTCCCCAGGAC
CCTTATGGAGAGTTGATCCCATTCGCCGACCCCTCGTGGTACCAAGGTTATGCATCCCCCTACTTCAGTGAATCC
CATGCCGCACTGCGAGACGAGGTCCGCCAGTGGGTCGAGTCCGAGATCGAGCCATATGTGACCGAATGGGACGAG
GCCAAGGAAGTGCCCGCTCACATCTACAAGCAGATGGGCGAGCGGGGCTACCTGGCTGGACTGCTGGGTGTCCAT
TTCCCCCAGAAGCACACCCCATACCGCGTGAAGTCTGTGTCAGCAGACCGGTGGGATTTGTTCCACGAGATGCTT
CTGACCGACGAGCTGTCGCGTGTCGGCAGCGGTGGTCTGGTGTGGAACCTGATCGGTGGCTACGGAATTGGCTGC
CCGCCATTGGTCAAGTTCGGCAAGAAGCCCCTCGTCGACCGAATCCTGCCGGGTATCTTGGCCGGCGACAAGCGC
ATTTGCCTCGCCATCACCGAGCCCGATGCGGGTAGTGACGTCGCAAACTTGGGTTGCGAGGCCAAGCTCACCGAG
GACGGCAAGCACTACATTGTCAACGGCGAGAAGAAGTGGATCACCAACGGTATCTACGCTGATTATTTCACGACC
GCTGTGCGCACCGGCAAGGATGGCATGAACGGCCTCAGCGTGCTGCTTATAGAGCGTGAAGCCGGTGGCGTTAGC
ACCCGACGCATGGACTGCCAGGGTGTGTGGTCTAGCGGTACGACCTATGTCACATTCGAGGATGTCAAGGTTCCC
GTGGAGAACCTGATCGGCAAGGAGAACCAGGGCTTCAAGGTTATCATGACAAACTTCAATCACGAGCGTATCGGC
ATTGTGATCCAGTGCGTGCGCTTCTCGCGCGTCTGCTATGAGGAGTCCATGAAATACGCACATAAGCGCAAAACC
TTCGGCAAGCGTCTCATCGACCACCCGGTTATTCGCATGAAACTCGCCCATATGGCTCGCCAGATCGAGGCCACC
TACAACTGGCTTGAGAACATCATCTTCCAGTGTCAGTCTATGGAGGAGACCGAGGCTATGCTCAAGCTCGGCGGT
GCCATTGCTGGATTGAAGGCGCAGTCAACGCAATGCTTTGAGTTCTGCGCTCGCGAGGCTAGTCAGATCTTTGGT
GGTTTAAGTTACAGCCGCGGCGGTCAGGGCGGTAAGATCGAGAGACTGTACCGTGATGTGCGTGCCTATGCTATC
CCCGGTGGTAGCGAGGAGATTATGCTTGATTTGAGTATGCGCCAGAGTTTGCGTGTTCACGGCATGTTTGGCATG
AAGCTATAA
Transcript >Pro_DTO377G3_2|g6303.t1
ATGGCAAAGACATTTAGCAAAGAGGATGTCGCCTCGCATAGCAAGGGTGACAGTCCCTGGGTCATTATCGATGAA
GATGTCTACGATGTTTCCAAGTTCCAAGATGAGCACCCTGGTGGAAAGAAGATTCTCCAGCGAGTTGCGGGAAAG
GACGCTTCGAAACAGTTCTGGAAATACCACAACGAGGGCATTCTGAAGAAGTACAAGGGTCAGCTGCAGATCGGT
TCGTTGGATACAAAGAAGACGGCACCGGCACCCTCGGCACCCTCGGCACCCCCGGCACCAGCGCCAACCCCGAAA
AAGGCTGCCCCCGAGCCGAAACCTACCATTTCTGAGTCTTCCGTGACACCACCTGCCATCGGCGCTCCCCAGGAC
CCTTATGGAGAGTTGATCCCATTCGCCGACCCCTCGTGGTACCAAGGTTATGCATCCCCCTACTTCAGTGAATCC
CATGCCGCACTGCGAGACGAGGTCCGCCAGTGGGTCGAGTCCGAGATCGAGCCATATGTGACCGAATGGGACGAG
GCCAAGGAAGTGCCCGCTCACATCTACAAGCAGATGGGCGAGCGGGGCTACCTGGCTGGACTGCTGGGTGTCCAT
TTCCCCCAGAAGCACACCCCATACCGCGTGAAGTCTGTGTCAGCAGACCGGTGGGATTTGTTCCACGAGATGCTT
CTGACCGACGAGCTGTCGCGTGTCGGCAGCGGTGGTCTGGTGTGGAACCTGATCGGTGGCTACGGAATTGGCTGC
CCGCCATTGGTCAAGTTCGGCAAGAAGCCCCTCGTCGACCGAATCCTGCCGGGTATCTTGGCCGGCGACAAGCGC
ATTTGCCTCGCCATCACCGAGCCCGATGCGGGTAGTGACGTCGCAAACTTGGGTTGCGAGGCCAAGCTCACCGAG
GACGGCAAGCACTACATTGTCAACGGCGAGAAGAAGTGGATCACCAACGGTATCTACGCTGATTATTTCACGACC
GCTGTGCGCACCGGCAAGGATGGCATGAACGGCCTCAGCGTGCTGCTTATAGAGCGTGAAGCCGGTGGCGTTAGC
ACCCGACGCATGGACTGCCAGGGTGTGTGGTCTAGCGGTACGACCTATGTCACATTCGAGGATGTCAAGGTTCCC
GTGGAGAACCTGATCGGCAAGGAGAACCAGGGCTTCAAGGTTATCATGACAAACTTCAATCACGAGCGTATCGGC
ATTGTGATCCAGTGCGTGCGCTTCTCGCGCGTCTGCTATGAGGAGTCCATGAAATACGCACATAAGCGCAAAACC
TTCGGCAAGCGTCTCATCGACCACCCGGTTATTCGCATGAAACTCGCCCATATGGCTCGCCAGATCGAGGCCACC
TACAACTGGCTTGAGAACATCATCTTCCAGTGTCAGTCTATGGAGGAGACCGAGGCTATGCTCAAGCTCGGCGGT
GCCATTGCTGGATTGAAGGCGCAGTCAACGCAATGCTTTGAGTTCTGCGCTCGCGAGGCTAGTCAGATCTTTGGT
GGTTTAAGTTACAGCCGCGGCGGTCAGGGCGGTAAGATCGAGAGACTGTACCGTGATGTGCGTGCCTATGCTATC
CCCGGTGGTAGCGAGGAGATTATGCTTGATTTGAGTATGCGCCAGAGTTTGCGTGTTCACGGCATGTTTGGCATG
AAGCTATAA
Gene >Pro_DTO377G3_2|g6303.t1
ATGGCAAAGACATTTAGCAAAGAGGATGTCGCCTCGCATAGCAAGGGTGACAGTCCCTGGGTCATTATCGATGAA
GATGTCTACGATGTTTCCAAGTTCCAAGATGAGCACCCTGGTAAGTGAACTCATGTGTGCAAATGCAGGGAATCA
CATGTTAACACTTCTTGTTCTGAACAGGTGGAAAGAAGAGTACGTTGGTCCGAGAGCATCCGCTACGTCCGATGA
ATTCACGTTGACAGTGTATATCTAGTTCTCCAGCGAGTTGCGGGAAAGGACGCTTCGAAACAGTTCTGGAAATAC
CACAACGAGGGCATTCTGAAGAAGTACAAGGGTCAGCTGCAGATCGGTTCGTTGGATACAAAGAAGACGGCACCG
GCACCCTCGGCACCCTCGGCACCCCCGGCACCAGCGCCAACCCCGAAAAAGGCTGCCCCCGAGCCGAAACCTACC
ATTTCTGAGTCTTCCGTGACACCACCTGCCATCGGCGCTCCCCAGGACCCTTATGGAGAGTTGATCCCATTCGCC
GACCCCTCGTGGTACCAAGGTGTAAGTCTTGCTTTCGCTCTATATCATCGATCTGTGCCTTTTACGGTTGCACCG
AAGCTAATCTATATGGCGCTCATAGTATGCATCCCCCTACTTCAGTGAATCCCATGCCGCACTGCGAGACGAGGT
CCGCCAGTGGGTCGAGTCCGAGATCGAGCCATATGTGACCGAATGGGACGAGGCCAAGGAAGTGCCCGCTCACAT
CTACAAGCAGATGGGCGAGCGGGGCTACCTGGCTGGACTGCTGGGTGTCCATTTCCCCCAGAAGCACACCCCATA
CCGCGTGAAGTCTGTGTCAGCAGACCGGTGGGATTTGTTCCACGAGATGCTTCTGACCGACGAGCTGTCGCGTGT
CGGCAGCGGTGGTCTGGTGTGGAACCTGATCGGTGGCTACGGAATTGGCTGCCCGCCATTGGTCAAGTTCGGCAA
GAAGCCCCTCGTCGACCGAATCCTGCCGGGTATCTTGGCCGGCGACAAGCGCATTTGCCTCGCCATCACCGAGCC
CGATGCGGGTAGTGACGTCGCAAACTTGGGTTGCGAGGCCAAGCTCACCGAGGACGGCAAGCACTACATTGTCAA
CGGCGAGAAGAAGTGGATCACCAACGGTATCTACGCTGATTATTTCACGACCGCTGTGCGCACCGGCAAGGATGG
CATGAACGGCCTCAGCGTGCTGCTTATAGAGCGTGAAGCCGGTGGCGTTAGCACCCGACGCATGGACTGCCAGGG
TGTGTGGTCTAGCGGTACGACCTATGTCACATTCGAGGATGTCAAGGTTCCCGTGGAGAACCTGATCGGCAAGGA
GAACCAGGGCTTCAAGGTTATCATGACAAACTTCAATCACGAGCGTATCGGCATTGTGATCCAGTGCGTGCGCTT
CTCGCGCGTCTGCTATGAGGAGTCCATGAAATACGCACATAAGCGCAAAACCTTCGGCAAGCGTCTCATCGACCA
CCCGGTTATTCGCATGAAACTCGCCCATATGGCTCGCCAGATCGAGGCCACCTACAACTGGCTTGAGAACATCAT
CTTCCAGTGTCAGTCTATGGAGGAGACCGAGGCTATGCTCAAGCTCGGCGGTGCCATTGCTGGATTGAAGGCGCA
GTCAACGCAATGCTTTGAGTTCTGCGCTCGCGAGGCTAGTCAGATCTTTGGTGGTTTAAGTTACAGCCGCGGCGG
TCAGGGCGGTAAGATCGAGAGACTGTACCGTGATGTGCGTGCCTATGCTATCCCCGGTGGTAGCGAGGAGATTAT
GCTTGATTTGAGTATGCGCCAGAGTTTGCGTGTTCACGGCATGTTTGGCATGAAGCTATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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