Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6262.t1
Gene name
Locationscaffold_16:360735..363172
Strand+
Gene length (bp)2437
Transcript length (bp)2325
Coding sequence length (bp)2325
Protein length (aa) 775

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04253 TFR_dimer Transferrin receptor-like dimerisation domain 1.2E-32 648 773
PF04389 Peptidase_M28 Peptidase family M28 6.7E-20 396 584
PF02225 PA PA domain 8.5E-08 203 280

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 63 0.5

Transmembrane Domains

Domain # Start End Length
1 35 57 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 72.94 44.46 101.42
5d_25C Five days - 25 degrees Celsius 68.49 42.15 94.83
7d_25C Seven days - 25 degrees Celsius 68.85 42.23 95.48
10d_25C Ten days - 25 degrees Celsius 64.43 39.63 89.22
7d_15C Seven days - 15 degrees Celsius 106.85 64.66 149.04
7d_30C Seven days - 30 degrees Celsius 67.01 41.24 92.78

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.837203 no
3d_25C 7d_25C 0.852289 no
3d_25C 7d_15C 0.076707 no
3d_25C 7d_30C 0.768987 no
3d_25C 10d_25C 0.647379 no
5d_25C 7d_25C 0.988435 no
5d_25C 7d_15C 0.029538 yes
5d_25C 7d_30C 0.948860 no
5d_25C 10d_25C 0.841189 no
7d_25C 7d_15C 0.029770 yes
7d_25C 7d_30C 0.935126 no
7d_25C 10d_25C 0.823467 no
7d_15C 7d_30C 0.022940 yes
7d_15C 10d_25C 0.012609 yes
7d_30C 10d_25C 0.903475 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6262.t1
MREKDMPYSETTPLLEVNVAPPRHRYPHNAVRQACTISLAALLSVATLLFLIPTAILPREHGSIWSYFPGAHPIP
HEAWPESFGLPYDQLQQILLNVPSADKAREWSQYYTAGPHLAGKNLSQALWTLEKWKEFGVEDTELVAYDIYINY
PVDHRLALLKKSGDKTEVTFEATLEEDVLEEDPTSGLPDRVPVFHGYSATGNVTAQYVYVNFGTYRDFEDLVNAN
VTLEGKIAIAKYGMIFRGLKVKRAQELGMVGVVIYSDPQEDGEITEENGYEAYPNGPARNPSAIQRGSTQFLSIL
PGDPTTPGYASKPGCERQDPHNSIPSIPSLPISYKEILPFLKALNGHGPKASDFNEFWQGGGLGYKGVEYNIGPS
PEDVLINLDNLQEYVTTPLWNVIGTIKGHIPDEVVILGNHRDAWIAGGAGDPNSGSAALNEVVRSFGEALKAGWK
PLRTIVFASWDGEEYGLLGSTEWVEEYLPWLSEANIAYLNVDVAAAGTNFEPRASPLLNKVINDVTALVQSPNQT
VRGQTVRDVWNGKISTMGSGSDFTAFQDFAGIASLDFGFGRGKNDPVYHYHSNYDSFAWMEKYGDKDFLYHQACT
KLWALAAAQLVESPLLALNATDYSLGLGSYLDHIKPAADNLPENTQFEFAPLDRAILEFQESAKAFDAFATDLKS
QLGDNVPWYHWWKKVRLWFQIRATNAKYKGIERAFLYQPGLDGREWFKHVVFAPGIWTGYSGATYPGLVESLEAG
DVENAEKWSSIIQDRIGAATQLLL*
Coding >Pro_DTO377G3_2|g6262.t1
ATGAGGGAAAAAGACATGCCTTATTCGGAGACCACACCTCTGCTGGAGGTCAATGTCGCTCCTCCGCGGCATAGA
TATCCCCACAATGCTGTTCGTCAAGCGTGTACTATCTCCCTTGCAGCCCTACTTTCTGTGGCGACTCTTCTGTTC
CTAATTCCTACTGCCATTCTGCCTCGAGAGCACGGCTCCATCTGGTCCTATTTCCCTGGTGCTCATCCAATTCCA
CATGAAGCGTGGCCAGAGAGCTTCGGTCTGCCTTACGACCAGCTCCAGCAGATCCTCCTCAATGTGCCTTCCGCA
GATAAGGCCCGAGAGTGGAGCCAATACTATACCGCGGGGCCGCACTTGGCAGGGAAGAATTTGTCTCAGGCGCTC
TGGACTTTGGAAAAATGGAAGGAATTTGGGGTGGAGGATACCGAGCTCGTGGCGTATGACATTTACATCAACTAT
CCGGTCGATCATCGCCTGGCCCTCTTGAAGAAATCCGGTGACAAGACCGAAGTGACCTTCGAAGCAACATTGGAG
GAGGATGTCCTCGAAGAGGATCCTACTTCCGGCCTGCCAGACCGTGTCCCAGTGTTCCATGGCTATTCTGCTACC
GGCAATGTGACCGCACAGTATGTGTACGTCAACTTTGGCACGTACAGGGATTTTGAGGACCTCGTCAATGCAAAC
GTCACCTTGGAGGGTAAGATTGCCATCGCTAAATACGGTATGATATTCCGTGGTTTGAAGGTAAAGCGTGCACAA
GAGCTTGGAATGGTCGGCGTAGTCATCTACAGTGATCCGCAGGAAGACGGTGAAATTACCGAGGAAAACGGCTAT
GAAGCCTATCCTAATGGACCGGCACGGAATCCCAGTGCTATCCAGAGAGGTAGCACTCAATTCCTCAGTATCCTT
CCCGGTGACCCCACAACCCCGGGATACGCATCTAAGCCTGGATGCGAACGACAAGATCCCCACAACTCAATCCCT
TCAATCCCATCTCTTCCCATCTCGTACAAGGAAATTTTGCCATTCTTGAAGGCGCTCAACGGTCACGGCCCCAAA
GCGTCGGACTTCAACGAGTTTTGGCAGGGAGGCGGCCTCGGCTACAAGGGCGTAGAGTACAATATCGGGCCATCT
CCCGAGGATGTGCTGATTAACCTCGACAACCTCCAGGAGTATGTGACAACCCCGCTGTGGAATGTTATCGGTACC
ATCAAGGGCCACATCCCCGATGAGGTTGTTATCCTCGGTAATCACCGTGACGCGTGGATTGCTGGTGGCGCAGGA
GATCCTAACAGTGGATCCGCCGCGTTGAACGAAGTCGTTCGCAGCTTCGGCGAGGCTCTCAAGGCAGGATGGAAG
CCACTGCGCACTATTGTCTTTGCCAGCTGGGACGGTGAAGAGTATGGCCTTCTCGGCTCGACCGAGTGGGTGGAA
GAATACCTCCCATGGCTCTCCGAGGCTAATATCGCATACCTGAATGTCGATGTGGCTGCTGCGGGCACTAATTTC
GAACCTCGTGCCAGTCCCTTGCTAAACAAGGTCATCAACGACGTCACCGCTCTGGTGCAGTCACCCAACCAGACC
GTGCGGGGCCAGACTGTCCGCGATGTCTGGAATGGCAAGATCTCGACGATGGGCAGCGGCAGTGACTTCACTGCC
TTCCAAGATTTCGCCGGCATCGCCAGTCTCGACTTTGGCTTTGGTCGTGGTAAAAATGACCCGGTCTACCACTAC
CACTCAAACTACGACAGCTTCGCATGGATGGAGAAGTACGGAGACAAGGACTTCCTCTACCACCAAGCTTGCACA
AAACTCTGGGCTCTGGCAGCGGCACAATTGGTGGAGTCTCCCCTTCTTGCGCTCAACGCCACCGACTATTCTCTT
GGCCTTGGATCTTACCTGGACCACATCAAACCTGCGGCGGACAATCTCCCGGAGAATACTCAATTCGAATTCGCA
CCTCTAGATAGGGCGATTCTTGAGTTCCAGGAATCTGCAAAGGCTTTCGATGCCTTTGCTACCGACCTGAAGTCC
CAGCTTGGTGATAACGTGCCTTGGTACCACTGGTGGAAGAAGGTGAGACTGTGGTTCCAGATTCGCGCTACCAAC
GCGAAGTACAAGGGCATTGAACGGGCTTTCTTATATCAGCCTGGTCTAGATGGCCGTGAATGGTTCAAGCACGTC
GTCTTTGCCCCTGGAATTTGGACTGGTTATTCGGGAGCCACGTACCCTGGACTTGTAGAGAGTCTCGAAGCTGGA
GACGTGGAGAACGCCGAGAAATGGAGCTCCATCATCCAGGATCGAATTGGTGCTGCGACCCAGTTGTTGCTGTAA
Transcript >Pro_DTO377G3_2|g6262.t1
ATGAGGGAAAAAGACATGCCTTATTCGGAGACCACACCTCTGCTGGAGGTCAATGTCGCTCCTCCGCGGCATAGA
TATCCCCACAATGCTGTTCGTCAAGCGTGTACTATCTCCCTTGCAGCCCTACTTTCTGTGGCGACTCTTCTGTTC
CTAATTCCTACTGCCATTCTGCCTCGAGAGCACGGCTCCATCTGGTCCTATTTCCCTGGTGCTCATCCAATTCCA
CATGAAGCGTGGCCAGAGAGCTTCGGTCTGCCTTACGACCAGCTCCAGCAGATCCTCCTCAATGTGCCTTCCGCA
GATAAGGCCCGAGAGTGGAGCCAATACTATACCGCGGGGCCGCACTTGGCAGGGAAGAATTTGTCTCAGGCGCTC
TGGACTTTGGAAAAATGGAAGGAATTTGGGGTGGAGGATACCGAGCTCGTGGCGTATGACATTTACATCAACTAT
CCGGTCGATCATCGCCTGGCCCTCTTGAAGAAATCCGGTGACAAGACCGAAGTGACCTTCGAAGCAACATTGGAG
GAGGATGTCCTCGAAGAGGATCCTACTTCCGGCCTGCCAGACCGTGTCCCAGTGTTCCATGGCTATTCTGCTACC
GGCAATGTGACCGCACAGTATGTGTACGTCAACTTTGGCACGTACAGGGATTTTGAGGACCTCGTCAATGCAAAC
GTCACCTTGGAGGGTAAGATTGCCATCGCTAAATACGGTATGATATTCCGTGGTTTGAAGGTAAAGCGTGCACAA
GAGCTTGGAATGGTCGGCGTAGTCATCTACAGTGATCCGCAGGAAGACGGTGAAATTACCGAGGAAAACGGCTAT
GAAGCCTATCCTAATGGACCGGCACGGAATCCCAGTGCTATCCAGAGAGGTAGCACTCAATTCCTCAGTATCCTT
CCCGGTGACCCCACAACCCCGGGATACGCATCTAAGCCTGGATGCGAACGACAAGATCCCCACAACTCAATCCCT
TCAATCCCATCTCTTCCCATCTCGTACAAGGAAATTTTGCCATTCTTGAAGGCGCTCAACGGTCACGGCCCCAAA
GCGTCGGACTTCAACGAGTTTTGGCAGGGAGGCGGCCTCGGCTACAAGGGCGTAGAGTACAATATCGGGCCATCT
CCCGAGGATGTGCTGATTAACCTCGACAACCTCCAGGAGTATGTGACAACCCCGCTGTGGAATGTTATCGGTACC
ATCAAGGGCCACATCCCCGATGAGGTTGTTATCCTCGGTAATCACCGTGACGCGTGGATTGCTGGTGGCGCAGGA
GATCCTAACAGTGGATCCGCCGCGTTGAACGAAGTCGTTCGCAGCTTCGGCGAGGCTCTCAAGGCAGGATGGAAG
CCACTGCGCACTATTGTCTTTGCCAGCTGGGACGGTGAAGAGTATGGCCTTCTCGGCTCGACCGAGTGGGTGGAA
GAATACCTCCCATGGCTCTCCGAGGCTAATATCGCATACCTGAATGTCGATGTGGCTGCTGCGGGCACTAATTTC
GAACCTCGTGCCAGTCCCTTGCTAAACAAGGTCATCAACGACGTCACCGCTCTGGTGCAGTCACCCAACCAGACC
GTGCGGGGCCAGACTGTCCGCGATGTCTGGAATGGCAAGATCTCGACGATGGGCAGCGGCAGTGACTTCACTGCC
TTCCAAGATTTCGCCGGCATCGCCAGTCTCGACTTTGGCTTTGGTCGTGGTAAAAATGACCCGGTCTACCACTAC
CACTCAAACTACGACAGCTTCGCATGGATGGAGAAGTACGGAGACAAGGACTTCCTCTACCACCAAGCTTGCACA
AAACTCTGGGCTCTGGCAGCGGCACAATTGGTGGAGTCTCCCCTTCTTGCGCTCAACGCCACCGACTATTCTCTT
GGCCTTGGATCTTACCTGGACCACATCAAACCTGCGGCGGACAATCTCCCGGAGAATACTCAATTCGAATTCGCA
CCTCTAGATAGGGCGATTCTTGAGTTCCAGGAATCTGCAAAGGCTTTCGATGCCTTTGCTACCGACCTGAAGTCC
CAGCTTGGTGATAACGTGCCTTGGTACCACTGGTGGAAGAAGGTGAGACTGTGGTTCCAGATTCGCGCTACCAAC
GCGAAGTACAAGGGCATTGAACGGGCTTTCTTATATCAGCCTGGTCTAGATGGCCGTGAATGGTTCAAGCACGTC
GTCTTTGCCCCTGGAATTTGGACTGGTTATTCGGGAGCCACGTACCCTGGACTTGTAGAGAGTCTCGAAGCTGGA
GACGTGGAGAACGCCGAGAAATGGAGCTCCATCATCCAGGATCGAATTGGTGCTGCGACCCAGTTGTTGCTGTAA
Gene >Pro_DTO377G3_2|g6262.t1
ATGAGGGAAAAAGACATGCCTTATTCGGAGACCACACCTCTGCTGGAGGTCAATGTCGCTCCTCCGCGGCATAGA
TATCCCCACAATGCTGTTCGTCAAGCGTGTACTATCTCCCTTGCAGCCCTACTTTCTGTGGCGACTCTTCTGTTC
CTAATTCCTACTGCCATTCTGCCTCGAGAGCACGGCTCCATCTGGTCCTATTTCCCTGGTGCTCATCCAATTCCA
CATGAAGCGTGGCCAGAGAGCTTCGGTCTGCCTTACGACCAGCTCCAGCAGATCCTCCTCAATGTGCCTTCCGCA
GATAAGGCCCGAGAGTGGAGCCAATACTATACCGCGGGGCCGCACTTGGCAGGGAAGAATTTGTCTCAGGCGCTC
TGGACTTTGGAAAAATGGAAGGAATTTGGGGTGGAGGATACCGAGCTCGTGGCGTATGACATTTACATCAACTAT
CCGGTCGATCATCGCCTGGCCCTCTTGAAGAAATCCGGTGACAAGACCGAAGTGACCTTCGAAGCAACATTGGAG
GAGGATGTCCTCGAAGAGGATCCTACTTCCGGCCTGCCAGACCGTGTCCCAGTGTTCCATGGCTATTCTGCTACC
GGCAATGTGACCGCACAGTATGTGTACGTCAACTTTGGCACGTACAGGGATTTTGAGGACCTCGTCAATGCAAAC
GTCACCTTGGAGGGTAAGATTGCCATCGCTAAATACGGTATGATATTCCGTGGTTTGAAGGTAAAGCGTGCACAA
GAGCTTGGAATGGTCGGCGTAGTCATCTACAGTGATCCGCAGGAAGACGGTGAAATTACCGAGGAAAACGGCTAT
GAAGCCTATCCTAATGGACCGGCACGGAATCCCAGTGCTATCCAGAGAGGTAGCACTCAATTCCTCAGTAAGGAT
TCTTTTCCAAGGTGCTGATATTGCAAAGCTAACTTGAACAAGGTATCCTTCCCGGTGACCCCACAACCCCGGGAT
ACGCATCTAAGCCTGGATGCGAACGACAAGATCCCCACAACTCAATCCCTTCAATCCCATCTCTTCCCATCTCGT
ACAAGGAAATTTTGCCATTCTTGAAGGCGCTCAACGGTCACGGCCCCAAAGCGTCGGACTTCAACGAGTTTTGGC
AGGGAGGCGGCCTCGGCTACAAGGGCGTAGAGTACAATATCGGGCCATCTCCCGAGGATGTGCTGATTAACCTCG
ACAACCTCCAGGAGTATGTGACAACCCCGCTGTGGAATGTTATCGGTACCATCAAGGGCCACATCCCCGATGAGG
TTGTTATCCTCGGTAATCACCGTGACGCGTGGATTGCTGGTGGCGCAGGAGATCCTAACAGTGGATCCGCCGCGT
TGAACGAAGTCGTTCGCAGCTTCGGCGAGGCTCTCAAGGCAGGATGGAAGCCACTGCGCACTATTGTCTTTGCCA
GCTGGGACGGTGAAGAGTATGGCCTTCTCGGCTCGACCGAGTGGGTGGAAGAATACCTCCCATGGCTCTCCGAGG
CTAATATCGCATACCTGAATGTCGATGTGGCTGCTGCGGGCACTAATTTCGAACCTCGTGCCAGTCCCTTGCTAA
ACAAGGTCATCAACGACGTCACCGCTCTGGTGCAGTCACCCAACCAGACCGTGCGGGGCCAGACTGTCCGCGATG
TCTGGAATGGCAAGATCTCGACGATGGGCAGCGGCAGTGACTTCACTGCCTTCCAAGATTTCGCCGGCATCGCCA
GTCTCGACTTTGGCTTTGGTCGTGGTAAAAATGACCCGGTCTACCACTACCACTCAAACTACGACAGCTTCGCAT
GGATGGAGAAGTACGGAGACAAGGACTTCCTCTACCACCAAGCTTGCACAAAACTCTGGGCTCTGGCAGCGGCAC
AATTGGTGGAGTCTCCCCTTCTTGCGCTCAACGCCACCGACTATTCTCTTGGCCTTGGATCTTACCTGGACCACA
TCAAACCTGCGGCGGACAATCTCCCGGAGAATACTCAATTCGAATTCGCACCTCTAGATAGGGCGATTCTTGAGT
TCCAGGAATCTGCAAAGGCTTTCGATGCCTTTGCTACCGACCTGAAGTCCCAGCTTGGTGATAACGTGCCTTGGT
ACCACTGGTGGAAGAAGGTGAGACTGTGGTTCCAGATTCGCGCTACCAACGCGAAGTACAAGGGCATTGAACGGG
CTTTCTTATATCAGCCTGGTCTAGATGGCCGTGAATGGTTCAAGCACGTCGTCTTTGCCCCTGGAATTTGGACTG
GTTATTCGGGAGCCACGTACCCTGGACTTGTAGAGAGTCTCGAAGCTGGAGACGTGGAGAACGCCGAGGTATGTG
TTTATTTGCGACCCTTTTTTGCCTTGGGTACAATTACTAACTGATGGGTTTTTAGAAATGGAGCTCCATCATCCA
GGATCGAATTGGTGCTGCGACCCAGTTGTTGCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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