Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6261.t1
Gene name
Locationscaffold_16:358605..360282
Strand+
Gene length (bp)1677
Transcript length (bp)1623
Coding sequence length (bp)1623
Protein length (aa) 541

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14474 RTC4 RTC4-like domain 1.2E-31 413 527

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 56 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6261.t1
MAAWAKPDSSHASNRMTRDNPPREHLLSTFNKPKSEDAILDVATINGEAVQPVETKPEINTDAEPLSSDEEDVGD
LIAGPSIEKKPEDDTDTEPLSSSPLSSPPLSSGEEEEAEDPEANAAQPSIEKKLDIDTDADPLSSDEEQASDSDA
SPPRKEVNYTTATLEKKLAEGNNRAYNSPQTRNGYSRKSNYARTLSAMTGSDDEDDIFLFSSQSHKRQRATKYAS
KPSTYFNRPSFPSRSTEKEMTSSPVEESPKEPEVTFIMPKDIENSSFREPRGGKDSNSISHPYTKEECEAMLLDD
DSPLSSPSSSTFEQMSQVDEVAAKEDPQPTSPRLALCPMCHKEVDWAELELFKSQPKQRIREQMMFCESHKLRSA
MDLWRERGYPNIDWDGFEERVQGYFPELEKLLVPGAFSYYRNILGSSFAPGKARNSRVRVSDNERLETMTCGYYG
SMGATKILETIIRRFSVVIRRLATTDDLIKTAGVAGYTQSVLVPELAVLMVKDDMKVNDEDARRILRESMDIGDR
VNPDFNVVPIPKDAE*
Coding >Pro_DTO377G3_2|g6261.t1
ATGGCCGCTTGGGCCAAACCTGATTCCAGCCATGCGTCCAATCGTATGACGAGGGACAATCCTCCGCGCGAGCAT
CTTTTGTCTACTTTCAATAAACCCAAGTCTGAAGACGCGATTCTCGACGTCGCGACAATCAATGGGGAGGCTGTT
CAACCTGTCGAGACAAAGCCGGAGATTAATACAGACGCGGAGCCTTTAAGCTCCGACGAAGAGGACGTCGGAGAC
CTCATTGCTGGACCTAGCATTGAGAAAAAGCCAGAGGATGATACAGATACCGAACCTCTAAGCTCCTCACCTCTC
AGCTCCCCACCTCTCAGCTCTGGTGAGGAGGAAGAAGCGGAAGACCCGGAAGCGAACGCTGCTCAACCAAGCATC
GAGAAGAAGTTGGATATCGACACCGATGCCGATCCTCTAAGCTCCGATGAAGAGCAAGCTAGCGACAGCGATGCT
TCCCCACCTCGCAAAGAGGTAAACTATACGACTGCGACTTTGGAAAAGAAGCTTGCGGAAGGAAACAATAGGGCA
TACAATAGCCCACAAACTCGCAATGGATACTCTCGCAAAAGCAATTATGCGCGAACCCTCAGTGCTATGACGGGC
TCCGATGACGAGGATGATATATTTTTGTTCTCCTCGCAGAGCCACAAGCGGCAAAGGGCAACAAAATATGCCTCC
AAGCCCTCGACCTATTTCAACAGGCCATCTTTCCCCTCACGGTCCACCGAGAAAGAAATGACCTCCTCGCCAGTC
GAAGAATCCCCAAAAGAACCCGAGGTGACCTTTATAATGCCAAAGGACATCGAAAATTCGAGTTTCCGAGAACCT
CGTGGCGGGAAAGACTCAAACTCTATATCGCACCCATACACGAAGGAAGAATGCGAAGCAATGTTGCTTGACGAT
GATTCACCTCTATCATCCCCATCTTCTTCCACTTTCGAGCAAATGTCGCAGGTCGATGAAGTGGCAGCGAAAGAA
GACCCCCAACCGACATCACCCCGCCTAGCCCTGTGTCCAATGTGCCATAAGGAAGTAGACTGGGCCGAGCTAGAA
CTGTTCAAATCACAGCCAAAGCAACGTATTCGCGAGCAAATGATGTTCTGTGAATCACACAAGCTTCGCAGTGCC
ATGGACTTGTGGCGTGAGCGAGGGTACCCTAACATTGACTGGGATGGGTTTGAAGAGCGCGTTCAGGGCTATTTC
CCCGAGCTCGAAAAACTACTTGTCCCTGGTGCTTTCTCTTACTACCGAAATATTCTTGGTAGCTCTTTCGCACCA
GGGAAAGCGAGAAACTCCCGTGTGAGAGTGAGCGATAACGAGAGACTCGAGACGATGACCTGTGGTTATTATGGT
AGTATGGGTGCAACCAAAATACTAGAAACAATCATCCGTCGTTTTTCTGTGGTTATACGTCGCCTAGCGACAACA
GATGATCTTATCAAGACGGCCGGCGTGGCTGGCTACACACAGTCTGTCCTTGTGCCTGAGTTGGCTGTGCTAATG
GTCAAGGATGACATGAAGGTCAACGACGAAGATGCCCGTCGGATTCTGAGGGAGAGTATGGACATTGGCGACAGA
GTCAATCCAGACTTCAATGTTGTCCCCATACCGAAAGATGCCGAATGA
Transcript >Pro_DTO377G3_2|g6261.t1
ATGGCCGCTTGGGCCAAACCTGATTCCAGCCATGCGTCCAATCGTATGACGAGGGACAATCCTCCGCGCGAGCAT
CTTTTGTCTACTTTCAATAAACCCAAGTCTGAAGACGCGATTCTCGACGTCGCGACAATCAATGGGGAGGCTGTT
CAACCTGTCGAGACAAAGCCGGAGATTAATACAGACGCGGAGCCTTTAAGCTCCGACGAAGAGGACGTCGGAGAC
CTCATTGCTGGACCTAGCATTGAGAAAAAGCCAGAGGATGATACAGATACCGAACCTCTAAGCTCCTCACCTCTC
AGCTCCCCACCTCTCAGCTCTGGTGAGGAGGAAGAAGCGGAAGACCCGGAAGCGAACGCTGCTCAACCAAGCATC
GAGAAGAAGTTGGATATCGACACCGATGCCGATCCTCTAAGCTCCGATGAAGAGCAAGCTAGCGACAGCGATGCT
TCCCCACCTCGCAAAGAGGTAAACTATACGACTGCGACTTTGGAAAAGAAGCTTGCGGAAGGAAACAATAGGGCA
TACAATAGCCCACAAACTCGCAATGGATACTCTCGCAAAAGCAATTATGCGCGAACCCTCAGTGCTATGACGGGC
TCCGATGACGAGGATGATATATTTTTGTTCTCCTCGCAGAGCCACAAGCGGCAAAGGGCAACAAAATATGCCTCC
AAGCCCTCGACCTATTTCAACAGGCCATCTTTCCCCTCACGGTCCACCGAGAAAGAAATGACCTCCTCGCCAGTC
GAAGAATCCCCAAAAGAACCCGAGGTGACCTTTATAATGCCAAAGGACATCGAAAATTCGAGTTTCCGAGAACCT
CGTGGCGGGAAAGACTCAAACTCTATATCGCACCCATACACGAAGGAAGAATGCGAAGCAATGTTGCTTGACGAT
GATTCACCTCTATCATCCCCATCTTCTTCCACTTTCGAGCAAATGTCGCAGGTCGATGAAGTGGCAGCGAAAGAA
GACCCCCAACCGACATCACCCCGCCTAGCCCTGTGTCCAATGTGCCATAAGGAAGTAGACTGGGCCGAGCTAGAA
CTGTTCAAATCACAGCCAAAGCAACGTATTCGCGAGCAAATGATGTTCTGTGAATCACACAAGCTTCGCAGTGCC
ATGGACTTGTGGCGTGAGCGAGGGTACCCTAACATTGACTGGGATGGGTTTGAAGAGCGCGTTCAGGGCTATTTC
CCCGAGCTCGAAAAACTACTTGTCCCTGGTGCTTTCTCTTACTACCGAAATATTCTTGGTAGCTCTTTCGCACCA
GGGAAAGCGAGAAACTCCCGTGTGAGAGTGAGCGATAACGAGAGACTCGAGACGATGACCTGTGGTTATTATGGT
AGTATGGGTGCAACCAAAATACTAGAAACAATCATCCGTCGTTTTTCTGTGGTTATACGTCGCCTAGCGACAACA
GATGATCTTATCAAGACGGCCGGCGTGGCTGGCTACACACAGTCTGTCCTTGTGCCTGAGTTGGCTGTGCTAATG
GTCAAGGATGACATGAAGGTCAACGACGAAGATGCCCGTCGGATTCTGAGGGAGAGTATGGACATTGGCGACAGA
GTCAATCCAGACTTCAATGTTGTCCCCATACCGAAAGATGCCGAATGA
Gene >Pro_DTO377G3_2|g6261.t1
ATGGCCGCTTGGGCCAAACCTGATTCCAGCCATGCGTCCAATCGTATGACGAGGGACAATCCTCCGCGCGAGCAT
CTTTTGTCTACTTTCAATAAACCCAAGTCTGAAGACGCGATTCTCGACGTCGCGACAATCAATGGGGAGGCTGTT
CAACCTGTCGAGACAAAGCCGGAGATTAATACAGACGCGGAGCCTTTAAGCTCCGACGAAGAGGACGTCGGAGAC
CTCATTGCTGGACCTAGCATTGAGAAAAAGCCAGAGGATGATACAGATACCGAACCTCTAAGCTCCTCACCTCTC
AGCTCCCCACCTCTCAGCTCTGGTGAGGAGGAAGAAGCGGAAGACCCGGAAGCGAACGCTGCTCAACCAAGCATC
GAGAAGAAGTTGGATATCGACACCGATGCCGATCCTCTAAGCTCCGATGAAGAGCAAGCTAGCGACAGCGATGCT
TCCCCACCTCGCAAAGAGGTAAACTATACGACTGCGACTTTGGAAAAGAAGCTTGCGGAAGGAAACAATAGGGCA
TACAATAGCCCACAAACTCGCAATGGATACTCTCGCAAAAGCAATTATGCGCGAACCCTCAGTGCTATGACGGGC
TCCGATGACGAGGATGATATATTTTTGTTCTCCTCGCAGAGCCACAAGCGGCAAAGGGCAACAAAATATGCCTCC
AAGCCCTCGACCTATTTCAACAGGCCATCTTTCCCCTCACGGTCCACCGAGAAAGAAATGACCTCCTCGCCAGTC
GAAGAATCCCCAAAAGAACCCGAGGTGACCTTTATAATGCCAAAGGACATCGAAAATTCGAGTTTCCGAGAACCT
CGTGGCGGGAAAGACTCAAACTCTATATCGCACCCATACACGAAGGAAGAATGCGAAGCAATGTTGCTTGACGAT
GATTCACCTCTATCATCCCCATCTTCTTCCACTTTCGAGCAAATGTCGCAGGTCGATGAAGTGGCAGCGAAAGAA
GACCCCCAACCGACATCACCCCGCCTAGCCCTGTGTCCAATGTGCCATAAGGAAGTAGACTGGGCCGAGCTAGAA
CTGTTCAAATCACAGCCAAAGCAACGTATTCGCGAGCAAATGATGTTCTGTGAATCACACAAGCTTCGCAGTGCC
ATGGACTTGTGGCGTGAGCGAGGGTACCCTAACATTGACTGGGATGGGTTTGAAGAGCGCGTTCAGGGCTATTTC
CCCGAGCTCGAAAAACTACTTGTCCCTGGTGCTTTCTCTTACTACCGAAATATTCTTGGTAGCTCTTTCGCACCA
GGGAAAGCGAGAAACTCCCGTGTGAGAGTGAGCGATAACGAGAGACTCGAGACGATGACCTGTGGTTATTATGGT
AGTATGGGTGCAACCAAAATGTATGTGGTATATAAGCCCCTGCTTAATCGGACTACGTTAACACTTATGTCTAGA
CTAGAAACAATCATCCGTCGTTTTTCTGTGGTTATACGTCGCCTAGCGACAACAGATGATCTTATCAAGACGGCC
GGCGTGGCTGGCTACACACAGTCTGTCCTTGTGCCTGAGTTGGCTGTGCTAATGGTCAAGGATGACATGAAGGTC
AACGACGAAGATGCCCGTCGGATTCTGAGGGAGAGTATGGACATTGGCGACAGAGTCAATCCAGACTTCAATGTT
GTCCCCATACCGAAAGATGCCGAATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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