Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6254.t1
Gene name
Locationscaffold_16:338650..340013
Strand-
Gene length (bp)1363
Transcript length (bp)921
Coding sequence length (bp)921
Protein length (aa) 307

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04991 LicD LicD family 1.8E-16 98 197
PF04991 LicD LicD family 3.3E-06 210 250

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6254.t1
MRSAVTRVLWLYGFLLATTISGVCGDTEPNFMSVRKNVTKEYKSERAIPKEKYFHESEFNHHYDGRYANGSLPDT
KVIPYLSDLIQTYFTTMNAIGAETWIMHGTLLAWWWNQKVFPWDDDLDVQISEATIHFLADYYNMTEHHFDLPNV
DGGRTYMLEINPHYVVKSERDTLNKIDARWIDMSSGLFIDITAVRKDEAKRLNGHPEALMCKDKHHYEESDIFPL
RDSLFEGVPVKIPYAYTYLLEEEYGPKALTRTSFYGHIFNEQTKIWESAVRKFKRSLRRGSRGNNLPMNTPTLTP
AHIDEA*
Coding >Pro_DTO377G3_2|g6254.t1
ATGCGCTCTGCAGTCACCAGAGTCTTGTGGCTCTATGGATTCCTTTTGGCGACTACCATTTCTGGAGTCTGCGGA
GATACAGAACCGAATTTCATGAGCGTGCGAAAGAATGTAACAAAGGAGTATAAGAGTGAACGTGCGATACCGAAA
GAAAAGTACTTTCATGAATCAGAATTCAATCATCATTATGACGGCCGATACGCCAATGGCAGTCTCCCAGATACA
AAAGTCATCCCATATCTCTCGGATCTAATCCAAACATATTTCACAACAATGAACGCAATCGGTGCAGAGACATGG
ATCATGCATGGGACTCTCTTGGCCTGGTGGTGGAACCAGAAGGTGTTTCCATGGGACGACGATCTAGATGTGCAG
ATCTCGGAGGCGACGATTCATTTCTTGGCGGATTACTATAACATGACAGAGCATCATTTCGATCTTCCTAACGTC
GACGGCGGCCGTACGTACATGCTCGAGATCAATCCTCATTATGTCGTCAAATCCGAGAGAGACACTTTGAATAAG
ATTGATGCCCGCTGGATTGACATGTCGTCTGGTCTTTTCATCGATATCACTGCTGTCCGCAAGGATGAGGCTAAG
CGGCTGAATGGCCATCCGGAAGCGCTAATGTGCAAGGATAAACATCACTATGAGGAGAGCGACATCTTCCCGCTG
CGCGACAGTCTCTTCGAGGGTGTTCCGGTCAAAATTCCATACGCTTATACATATCTCCTCGAAGAAGAGTATGGC
CCAAAGGCACTTACACGAACGAGCTTTTATGGTCACATCTTCAATGAACAGACCAAGATTTGGGAGTCCGCGGTG
CGTAAATTCAAGCGCTCGCTTCGACGAGGCTCACGCGGTAACAACTTACCCATGAACACCCCTACACTCACTCCT
GCGCACATAGACGAAGCATGA
Transcript >Pro_DTO377G3_2|g6254.t1
ATGCGCTCTGCAGTCACCAGAGTCTTGTGGCTCTATGGATTCCTTTTGGCGACTACCATTTCTGGAGTCTGCGGA
GATACAGAACCGAATTTCATGAGCGTGCGAAAGAATGTAACAAAGGAGTATAAGAGTGAACGTGCGATACCGAAA
GAAAAGTACTTTCATGAATCAGAATTCAATCATCATTATGACGGCCGATACGCCAATGGCAGTCTCCCAGATACA
AAAGTCATCCCATATCTCTCGGATCTAATCCAAACATATTTCACAACAATGAACGCAATCGGTGCAGAGACATGG
ATCATGCATGGGACTCTCTTGGCCTGGTGGTGGAACCAGAAGGTGTTTCCATGGGACGACGATCTAGATGTGCAG
ATCTCGGAGGCGACGATTCATTTCTTGGCGGATTACTATAACATGACAGAGCATCATTTCGATCTTCCTAACGTC
GACGGCGGCCGTACGTACATGCTCGAGATCAATCCTCATTATGTCGTCAAATCCGAGAGAGACACTTTGAATAAG
ATTGATGCCCGCTGGATTGACATGTCGTCTGGTCTTTTCATCGATATCACTGCTGTCCGCAAGGATGAGGCTAAG
CGGCTGAATGGCCATCCGGAAGCGCTAATGTGCAAGGATAAACATCACTATGAGGAGAGCGACATCTTCCCGCTG
CGCGACAGTCTCTTCGAGGGTGTTCCGGTCAAAATTCCATACGCTTATACATATCTCCTCGAAGAAGAGTATGGC
CCAAAGGCACTTACACGAACGAGCTTTTATGGTCACATCTTCAATGAACAGACCAAGATTTGGGAGTCCGCGGTG
CGTAAATTCAAGCGCTCGCTTCGACGAGGCTCACGCGGTAACAACTTACCCATGAACACCCCTACACTCACTCCT
GCGCACATAGACGAAGCATGA
Gene >Pro_DTO377G3_2|g6254.t1
ATGCGCTCTGCAGTCACCAGAGTCTTGTGGCTCTATGGATTCCTTTTGGCGACTACCATTTCTGGAGTCTGCGGA
GATACAGAACCGAATTTCATGAGCGTGCGAAAGAATGTAACAAAGGAGTATAAGAGTGAACGTGCGATACCGAAA
GAAAAGTACTTTCGTAAGTGCAATCCTTAATCCTTTCGTCGATGTGTACAACCCCAAGCTTGGTTTATAAGGCCA
CGAACCATGGAACTCTGATTTGAATCTTTACTGACTCGCGTGAACCCTACAGATGAATCAGAGTATGTCGAACAT
CTCCCTTCCTGGGAATTGTACCAGATATGATCAAAACTAAACCGCAGTACTCAGATTCAATCATCATTATGACGG
CCGGTACGCTCGCTCATCCTTCAATCCCAACCGCGATGCCTAACGCTTTTCAGATACGCCAATGGCAGTCTCCCA
GATACAAAAGTCATCCCATATCTCTCGGATCTAATCCAAACATATTTCACAACAATGAACGCAATCGGTGCAGAG
ACATGGATCATGCATGGGACTCTCTTGGCCTGGTGGTGGAACCAGAAGGTGGGATTATGGATATCCCGAATTATA
AGGTGACTCCCTAACCAGTTGTATAGGTGTTTCCATGGGACGACGATCTAGATGTGCAGATCTCGGAGGCGACGA
TTCATTTCTTGGCGGATTACTATAACATGACAGAGCATCATTTCGATCTTCCTAACGTCGACGGCGGCCGTACGT
ACATGCTCGAGATCAATCCTCATTATGTCGTCAAATCCGAGAGAGACACTTTGAATAAGATTGATGCCCGCTGGA
TTGACATGTCGTCTGGTCTTTTCATCGATATCACTGCTGTCCGCAAGGATGAGGCTAAGCGGCTGAATGGCCATC
CGGAAGCGCTAATGTGCAAGGATAAACATCACTATGAGGTAAGTTGTCTGGTAGTGCTGTCTGTCTAGTCTCGCT
AACGGGTAATATAGGAGAGCGACATCTTCCCGCTGCGCGACAGTCTCTTCGAGGGTGTTCCGGTCAAAATTCCAT
ACGCTTATACATATCTCCTCGAAGAAGAGTATGGCCCAAAGGCACTTACACGAACGAGCTTTTATGGGTGAGTCC
TGAATTGTTCCATTCTATGGATGTTAGTTTGGGTAACTAACTGTCCTAGTCACATCTTCAATGAACAGACCAAGA
TTTGGGAGTCCGCGGTGTGAGTTTTATAACTATCATATCTAACGATGGTTGACTGATGCTCTACAGGCGTAAATT
CAAGCGCTCGCTTCGACGAGGCTCACGCGGTAACAACTTACCCATGAACACCCCTACACTCACTCCTGCGCACAT
AGACGAAGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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