Protein ID | Pro_DTO377G3_2|g6251.t1 |
Gene name | |
Location | scaffold_16:330682..333591 |
Strand | + |
Gene length (bp) | 2909 |
Transcript length (bp) | 2790 |
Coding sequence length (bp) | 2790 |
Protein length (aa) | 930 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04408 | HA2 | Helicase associated domain (HA2) | 2.0E-19 | 584 | 670 |
PF07717 | OB_NTP_bind | Oligonucleotide/oligosaccharide-binding (OB)-fold | 3.3E-15 | 728 | 805 |
PF00271 | Helicase_C | Helicase conserved C-terminal domain | 3.6E-15 | 391 | 519 |
PF00270 | DEAD | DEAD/DEAH box helicase | 1.8E-06 | 198 | 348 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003676 | nucleic acid binding | Yes |
GO:0004386 | helicase activity | Yes |
GO:0005524 | ATP binding | Yes |
GO:0017076 | purine nucleotide binding | No |
GO:1901363 | heterocyclic compound binding | No |
GO:0032555 | purine ribonucleotide binding | No |
GO:0097159 | organic cyclic compound binding | No |
GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | No |
GO:0016462 | pyrophosphatase activity | No |
GO:0032553 | ribonucleotide binding | No |
GO:0003824 | catalytic activity | No |
GO:0032559 | adenyl ribonucleotide binding | No |
GO:0043168 | anion binding | No |
GO:0017111 | nucleoside-triphosphatase activity | No |
GO:1901265 | nucleoside phosphate binding | No |
GO:0097367 | carbohydrate derivative binding | No |
GO:0030554 | adenyl nucleotide binding | No |
GO:0016787 | hydrolase activity | No |
GO:0008144 | drug binding | No |
GO:0003674 | molecular_function | No |
GO:0000166 | nucleotide binding | No |
GO:0043167 | ion binding | No |
GO:0035639 | purine ribonucleoside triphosphate binding | No |
GO:0005488 | binding | No |
GO:0016817 | hydrolase activity, acting on acid anhydrides | No |
GO:0036094 | small molecule binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 12 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g6251.t1 MSRNEMGPPAKRHKGFGHLPAGLRDAKRKDIDNWETNRMLTSGVAQRRDHEGDFMPEDEEATRVHLLVHDLRPPF LDGRTIFTKQLEPISAVRDPQSDMAVFSRKGSRVVNERRQQRERQKQAQEATNMAGTALGNFMGIKEDEGDSAVA VPIEDTYKGGGNKFARHMKKDGGSSAFSNSKTMREQREYLPAFAVREDLMRVIRDNQVVVVVGETGSGKTTQLTQ FLHEDGYSKFGMIGCTQPRRVAAMSVAKRVSEEMDVELGGLVGYAIRFEDCTSDDTLIKYMTDGVLLRESLTQKD LDKYSCIIMDEAHERALNTDVLMGLLKKVLTRRRDLKLIVTSATMNSERFSRFFGGAAEFVIPGRTFPVDLHFSR TPCEDYVDSAVKQVLAIHVSQGAGDILVFMTGQEDIEATCELVEERLKQLNDPPKLSVLPIYSQMPAEQQAKIFE KAAPGVRKVIVATNIAETSLTVDGIMFVVDAGYSKLKVYNPRMGMDSLQVTPISQANANQRSGRAGRTGPGKAYR LYTETAYKNELYIQTIPEIQRTSLANTILLLKSLGVKDLLDFDFMDPPPQETISTSLFELWSLGALDNLGDLTSL GRRMTPFPMDPPLAKLIIMASDVYECSEEMLTIVAMLSVANVFYRPKERQEEADSAHEKFFVPESDHLTLLHVYT QWKTNGHSDAWCIKHFLHSKTLRRAKEVRDQLHDIMIQQKMPLVSCGTDWDLIRKCICSGFFHQAAKLKGIGEFI NLRTSVTMALHPTSALYGIGQVPEYVVYHELILTSKEYMSTVTAVDPHWLAELGGVFYSVKEKGYSQRDRRVTEI EFNKRMEIEEQMAADRERAAAEKLREQERNDPARRRTEIEVGGKSVVRKAIIKPGRRVGGLTASSSSSSRPGANI DGAHDGGGNRPGSSVVKRPTVPRRPGRAF* |
Coding | >Pro_DTO377G3_2|g6251.t1 ATGTCTCGCAACGAGATGGGCCCTCCGGCCAAAAGGCACAAGGGCTTTGGACACCTCCCTGCAGGCCTGCGCGAC GCAAAACGGAAGGACATTGACAATTGGGAAACCAATCGAATGCTTACTTCTGGTGTAGCGCAACGACGAGACCAT GAGGGCGACTTCATGCCCGAAGATGAAGAAGCGACTCGCGTGCATTTACTCGTCCACGATCTCAGGCCGCCTTTT CTCGACGGTCGTACGATCTTCACGAAGCAACTGGAGCCGATCTCCGCTGTTCGAGATCCGCAAAGTGACATGGCG GTATTCAGTCGGAAAGGAAGCAGGGTCGTTAATGAGCGCCGGCAGCAGCGAGAACGACAAAAGCAAGCACAGGAG GCGACAAATATGGCCGGCACAGCTCTGGGGAACTTCATGGGCATCAAAGAGGACGAAGGAGACAGCGCTGTCGCT GTGCCCATCGAGGATACCTACAAAGGAGGAGGAAACAAATTTGCCAGACATATGAAGAAAGACGGTGGCTCTAGC GCTTTCAGCAATAGCAAGACCATGCGCGAACAGAGAGAGTATCTGCCCGCCTTTGCCGTGCGAGAGGATCTTATG AGAGTCATTCGGGATAACCAAGTTGTGGTGGTCGTTGGAGAGACCGGATCTGGGAAAACCACCCAGCTAACTCAA TTTCTACACGAGGATGGCTATTCTAAGTTCGGTATGATCGGATGCACGCAGCCTCGCCGTGTAGCTGCTATGAGT GTCGCTAAGCGAGTCAGCGAGGAGATGGACGTCGAGCTCGGTGGACTCGTCGGATACGCTATCCGTTTCGAGGAT TGTACGAGTGACGACACGTTGATCAAATACATGACGGATGGTGTATTGCTGCGAGAGTCTCTCACCCAAAAGGAT CTCGACAAATACTCATGTATCATTATGGACGAGGCACACGAAAGAGCCTTGAACACTGACGTCTTGATGGGTCTC CTTAAAAAAGTCCTGACCCGCCGCAGGGATCTGAAATTGATCGTGACCTCAGCAACAATGAACTCTGAACGATTT TCGCGCTTCTTTGGCGGTGCCGCAGAATTCGTCATTCCCGGCAGAACCTTCCCTGTTGATCTTCACTTCTCGCGC ACACCCTGTGAAGATTATGTCGATAGTGCGGTCAAGCAGGTCTTGGCCATTCATGTGTCTCAGGGCGCTGGTGAT ATTCTTGTCTTCATGACTGGCCAAGAAGATATCGAGGCAACCTGCGAGCTGGTTGAAGAAAGGCTGAAGCAGCTG AATGATCCGCCGAAACTCAGCGTTCTACCCATCTACAGTCAAATGCCGGCCGAGCAACAGGCAAAGATCTTTGAG AAGGCCGCCCCGGGCGTGCGCAAAGTAATTGTGGCTACAAATATTGCTGAGACAAGTCTAACGGTCGACGGTATC ATGTTCGTTGTGGATGCAGGTTACTCAAAGCTGAAAGTGTACAACCCGCGCATGGGTATGGACTCTCTCCAGGTC ACCCCGATTTCCCAAGCCAATGCAAACCAGCGATCTGGACGTGCTGGGCGGACTGGACCGGGCAAGGCCTATCGT CTATATACGGAAACAGCCTACAAGAACGAGCTTTACATTCAAACCATCCCTGAGATTCAGCGAACCAGTCTTGCC AATACCATACTGTTACTGAAATCCCTTGGTGTGAAGGACCTTTTGGACTTCGACTTCATGGATCCTCCCCCACAA GAGACAATCTCTACCTCTCTTTTCGAGCTCTGGTCGCTGGGTGCTCTGGACAACCTGGGTGATCTTACATCTCTA GGACGTCGCATGACACCATTCCCCATGGATCCCCCTCTTGCCAAGCTCATAATCATGGCCTCCGATGTATACGAG TGCAGCGAAGAAATGTTAACCATCGTCGCAATGCTTTCGGTTGCAAATGTCTTTTATCGTCCCAAAGAACGACAG GAGGAAGCCGATTCAGCCCACGAGAAATTCTTCGTTCCAGAATCCGATCACTTGACCCTTCTCCACGTTTATACT CAATGGAAAACCAACGGTCACTCAGATGCCTGGTGCATCAAGCACTTTTTGCACTCCAAAACGCTCCGCCGCGCC AAGGAAGTCCGAGACCAACTTCACGACATAATGATCCAACAAAAAATGCCCCTCGTCAGCTGCGGTACAGACTGG GACTTGATCCGCAAGTGCATCTGTTCGGGCTTCTTCCATCAAGCCGCAAAACTAAAGGGCATTGGCGAGTTCATT AACCTCCGCACCAGCGTGACTATGGCGCTCCATCCCACCAGTGCCCTTTACGGTATCGGCCAAGTGCCCGAGTAC GTCGTCTACCACGAGTTAATCCTGACGTCCAAGGAATACATGTCCACAGTGACAGCCGTTGACCCTCATTGGCTC GCCGAACTCGGTGGCGTATTCTACTCCGTTAAAGAAAAAGGCTACTCGCAGCGCGACCGCCGCGTGACAGAAATC GAGTTCAACAAGCGCATGGAAATCGAAGAGCAGATGGCAGCTGACCGTGAACGTGCTGCTGCCGAGAAATTGCGC GAGCAGGAACGCAACGACCCAGCCCGCCGCAGAACGGAAATCGAGGTTGGCGGAAAGTCCGTCGTGCGTAAAGCT ATCATCAAGCCAGGACGCAGGGTCGGCGGTTTGACTGCTTCATCTTCATCTTCCTCGCGACCTGGAGCCAATATC GATGGCGCTCATGATGGAGGTGGAAATCGTCCCGGAAGCAGTGTGGTCAAGAGGCCTACGGTGCCTCGGAGACCA GGACGTGCATTCTAG |
Transcript | >Pro_DTO377G3_2|g6251.t1 ATGTCTCGCAACGAGATGGGCCCTCCGGCCAAAAGGCACAAGGGCTTTGGACACCTCCCTGCAGGCCTGCGCGAC GCAAAACGGAAGGACATTGACAATTGGGAAACCAATCGAATGCTTACTTCTGGTGTAGCGCAACGACGAGACCAT GAGGGCGACTTCATGCCCGAAGATGAAGAAGCGACTCGCGTGCATTTACTCGTCCACGATCTCAGGCCGCCTTTT CTCGACGGTCGTACGATCTTCACGAAGCAACTGGAGCCGATCTCCGCTGTTCGAGATCCGCAAAGTGACATGGCG GTATTCAGTCGGAAAGGAAGCAGGGTCGTTAATGAGCGCCGGCAGCAGCGAGAACGACAAAAGCAAGCACAGGAG GCGACAAATATGGCCGGCACAGCTCTGGGGAACTTCATGGGCATCAAAGAGGACGAAGGAGACAGCGCTGTCGCT GTGCCCATCGAGGATACCTACAAAGGAGGAGGAAACAAATTTGCCAGACATATGAAGAAAGACGGTGGCTCTAGC GCTTTCAGCAATAGCAAGACCATGCGCGAACAGAGAGAGTATCTGCCCGCCTTTGCCGTGCGAGAGGATCTTATG AGAGTCATTCGGGATAACCAAGTTGTGGTGGTCGTTGGAGAGACCGGATCTGGGAAAACCACCCAGCTAACTCAA TTTCTACACGAGGATGGCTATTCTAAGTTCGGTATGATCGGATGCACGCAGCCTCGCCGTGTAGCTGCTATGAGT GTCGCTAAGCGAGTCAGCGAGGAGATGGACGTCGAGCTCGGTGGACTCGTCGGATACGCTATCCGTTTCGAGGAT TGTACGAGTGACGACACGTTGATCAAATACATGACGGATGGTGTATTGCTGCGAGAGTCTCTCACCCAAAAGGAT CTCGACAAATACTCATGTATCATTATGGACGAGGCACACGAAAGAGCCTTGAACACTGACGTCTTGATGGGTCTC CTTAAAAAAGTCCTGACCCGCCGCAGGGATCTGAAATTGATCGTGACCTCAGCAACAATGAACTCTGAACGATTT TCGCGCTTCTTTGGCGGTGCCGCAGAATTCGTCATTCCCGGCAGAACCTTCCCTGTTGATCTTCACTTCTCGCGC ACACCCTGTGAAGATTATGTCGATAGTGCGGTCAAGCAGGTCTTGGCCATTCATGTGTCTCAGGGCGCTGGTGAT ATTCTTGTCTTCATGACTGGCCAAGAAGATATCGAGGCAACCTGCGAGCTGGTTGAAGAAAGGCTGAAGCAGCTG AATGATCCGCCGAAACTCAGCGTTCTACCCATCTACAGTCAAATGCCGGCCGAGCAACAGGCAAAGATCTTTGAG AAGGCCGCCCCGGGCGTGCGCAAAGTAATTGTGGCTACAAATATTGCTGAGACAAGTCTAACGGTCGACGGTATC ATGTTCGTTGTGGATGCAGGTTACTCAAAGCTGAAAGTGTACAACCCGCGCATGGGTATGGACTCTCTCCAGGTC ACCCCGATTTCCCAAGCCAATGCAAACCAGCGATCTGGACGTGCTGGGCGGACTGGACCGGGCAAGGCCTATCGT CTATATACGGAAACAGCCTACAAGAACGAGCTTTACATTCAAACCATCCCTGAGATTCAGCGAACCAGTCTTGCC AATACCATACTGTTACTGAAATCCCTTGGTGTGAAGGACCTTTTGGACTTCGACTTCATGGATCCTCCCCCACAA GAGACAATCTCTACCTCTCTTTTCGAGCTCTGGTCGCTGGGTGCTCTGGACAACCTGGGTGATCTTACATCTCTA GGACGTCGCATGACACCATTCCCCATGGATCCCCCTCTTGCCAAGCTCATAATCATGGCCTCCGATGTATACGAG TGCAGCGAAGAAATGTTAACCATCGTCGCAATGCTTTCGGTTGCAAATGTCTTTTATCGTCCCAAAGAACGACAG GAGGAAGCCGATTCAGCCCACGAGAAATTCTTCGTTCCAGAATCCGATCACTTGACCCTTCTCCACGTTTATACT CAATGGAAAACCAACGGTCACTCAGATGCCTGGTGCATCAAGCACTTTTTGCACTCCAAAACGCTCCGCCGCGCC AAGGAAGTCCGAGACCAACTTCACGACATAATGATCCAACAAAAAATGCCCCTCGTCAGCTGCGGTACAGACTGG GACTTGATCCGCAAGTGCATCTGTTCGGGCTTCTTCCATCAAGCCGCAAAACTAAAGGGCATTGGCGAGTTCATT AACCTCCGCACCAGCGTGACTATGGCGCTCCATCCCACCAGTGCCCTTTACGGTATCGGCCAAGTGCCCGAGTAC GTCGTCTACCACGAGTTAATCCTGACGTCCAAGGAATACATGTCCACAGTGACAGCCGTTGACCCTCATTGGCTC GCCGAACTCGGTGGCGTATTCTACTCCGTTAAAGAAAAAGGCTACTCGCAGCGCGACCGCCGCGTGACAGAAATC GAGTTCAACAAGCGCATGGAAATCGAAGAGCAGATGGCAGCTGACCGTGAACGTGCTGCTGCCGAGAAATTGCGC GAGCAGGAACGCAACGACCCAGCCCGCCGCAGAACGGAAATCGAGGTTGGCGGAAAGTCCGTCGTGCGTAAAGCT ATCATCAAGCCAGGACGCAGGGTCGGCGGTTTGACTGCTTCATCTTCATCTTCCTCGCGACCTGGAGCCAATATC GATGGCGCTCATGATGGAGGTGGAAATCGTCCCGGAAGCAGTGTGGTCAAGAGGCCTACGGTGCCTCGGAGACCA GGACGTGCATTCTAG |
Gene | >Pro_DTO377G3_2|g6251.t1 ATGTCTCGCAACGAGATGGGCCCTCCGGCCAAAAGGCACAAGGGCTTTGGACACCTCCCTGCAGGCCTGCGCGAC GCAAAACGGAAGGACATTGACAATTGGGAAACCAATCGAATGCTTACTTCTGGTGTAGCGCAACGACGAGACCAT GAGGGCGACTTCATGCCCGAAGATGAAGAAGCGACTCGCGTGCATTTACTCGTCCACGATCTCAGGCCGCCTTTT CTCGACGGTCGTACGATCTTCACGAAGCAACTGGAGCCGATCTCCGCTGTTCGAGATCCGCAAAGTGACATGGCG GTATTCAGTCGGAAAGGAAGCAGGGTCGTTAATGAGCGCCGGCAGCAGCGAGAACGACAAAAGCAAGCACAGGAG GCGACAAATATGGCCGGCACAGCTCTGGGGAACTTCATGGGCATCAAAGAGGACGAAGGAGACAGCGCTGTCGCT GTGCCCATCGAGGATACCTACAAAGGAGGAGGAAACAAATTTGCCAGACATATGAAGAAAGACGGTGGCTCTAGC GCTTTCAGCAATAGCAAGACCATGCGCGAACAGAGAGAGTATCTGCCCGCCTTTGCCGTGCGAGAGGATCTTATG AGAGTCATTCGGGATAACCAAGTTGTGGTGGTCGTTGGAGAGACCGGATCTGGGAAAACCACCCAGCTAACTCAA TTTCTACACGAGGATGGCTATTCTAAGTTCGGTATGATCGGATGCACGCAGCCTCGCCGTGTAGCTGCTATGAGT GTCGCTAAGCGAGTCAGCGAGGAGATGGACGTCGAGCTCGGTGGACTCGTCGGATACGCTATCCGTTTCGAGGAT TGTACGAGTGACGACACGTTGATCAAATGTGAGTTTCTTCTTTCCGCTTTGGTGTGATCATATAGCTAATTTATG TACTAGACATGACGGATGGTGTATTGCTGCGAGAGTCTCTCACCCAAAAGGATCTCGACAAATACTCATGTATCA TTATGGACGAGGCACACGAAAGAGCCTTGAACACTGACGTCTTGATGGGTCTCCTTAAAAAAGTCCTGACCCGCC GCAGGGATCTGAAATTGATCGTGACCTCAGCAACAATGAACTCTGAACGATTTTCGCGCTTCTTTGGCGGTGCCG CAGAATTCGTCATTCCCGGCAGAACCTTCCCTGTTGATCTTCACTTCTCGCGCACACCCTGTGAAGATTATGTCG ATAGTGCGGTCAAGCAGGTCTTGGCCATTCATGTGTCTCAGGGCGCTGGTGATATTCTTGTCTTCATGACTGGCC AAGAAGATATCGAGGCAACCTGCGAGCTGGTTGAAGAAAGGCTGAAGCAGCTGAATGATCCGCCGAAACTCAGCG TTCTACCCATCTACAGTCAAATGCCGGCCGAGCAACAGGCAAAGATCTTTGAGAAGGCCGCCCCGGGCGTGCGCA AAGTAATTGTGGCTACAAATATTGCTGAGACAAGTCTAACGGTCGACGGTATCATGTTCGTTGTGGATGCAGGTT ACTCAAAGCTGAAAGTGTACAACCCGCGCATGGGTATGGACTCTCTCCAGGTCACCCCGATTTCCCAAGCCAATG CAAACCAGCGATCTGGACGTGCTGGGCGGACTGGACCGGGCAAGGCCTATCGTCTATATACGGAAACAGCCTACA AGAACGAGCTTTACATTCAAACCATCCCTGAGATTCAGCGAACCAGTCTTGCCAATACCATACTGTTACTGAAAT CCCTTGGTGTGAAGGACCTTTTGGACTTCGACTTCATGGATCCTCCCCCACAAGAGACAATCTCTACCTCTCTTT TCGAGCTCTGGTCGCTGGGTGCTCTGGACAACCTGGGTGATCTTACATCTCTAGGACGTCGCATGACACCATTCC CCATGGATCCCCCTCTTGCCAAGCTCATAATCATGGCCTCCGATGTATACGAGTGCAGCGAAGAAATGTTAACCA TCGTCGCAATGCTTTCGGTTGCAAATGTCTTTTATCGTCCCAAAGAACGACAGGAGGAAGCCGATTCAGCCCACG AGAAATTCTTCGTTCCAGAATCCGATCACTTGACCCTTCTCCACGTTTATACTCAATGGAAAACCAACGGTCACT CAGATGCCTGGTGCATCAAGCACTTTTTGCACTCCAAAACGCTCCGCCGCGCCAAGGAAGTCCGAGACCAACTTC ACGACATAATGATCCAACAAAAAATGCCCCTCGTCAGCTGCGGTACAGACTGGGACTTGATCCGCAAGTGCATCT GTTCGGGCTTCTTCCATCAAGCCGCAAAACTAAAGGGCATTGGCGAGTTCATTAACCTCCGCACCAGCGTGACTA TGGCGCTCCATCCCACCAGTGCCCTTTACGGTATCGGCCAAGTGCCCGAGTACGTCGTCTACCACGAGTTAATCC TGACGTCCAAGGAATACATGTCCACAGTGACAGCCGTTGACCCTCATGTAAGTTACCACTCCCCCATTCATGCCT GTTTGTCATCTAGTACTCAACTAACTCGTTTCTCTCAGTGGCTCGCCGAACTCGGTGGCGTATTCTACTCCGTTA AAGAAAAAGGCTACTCGCAGCGCGACCGCCGCGTGACAGAAATCGAGTTCAACAAGCGCATGGAAATCGAAGAGC AGATGGCAGCTGACCGTGAACGTGCTGCTGCCGAGAAATTGCGCGAGCAGGAACGCAACGACCCAGCCCGCCGCA GAACGGAAATCGAGGTTGGCGGAAAGTCCGTCGTGCGTAAAGCTATCATCAAGCCAGGACGCAGGGTCGGCGGTT TGACTGCTTCATCTTCATCTTCCTCGCGACCTGGAGCCAATATCGATGGCGCTCATGATGGAGGTGGAAATCGTC CCGGAAGCAGTGTGGTCAAGAGGCCTACGGTGCCTCGGAGACCAGGACGTGCATTCTAG |