Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6214.t1
Gene name
Locationscaffold_16:243261..244212
Strand+
Gene length (bp)951
Transcript length (bp)837
Coding sequence length (bp)837
Protein length (aa) 279

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 4.0E-36 3 198
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 1.4E-28 11 198
PF08659 KR KR domain 7.8E-08 5 94

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6214.t1
MAKVALITGGTSGMGLAVAKDLSQTGSWQVNIIGTNQERGQEAAASLLNVTFYQADVRNYQQLAAVFDQIFNATD
RIDFVFANAGRADYTDFFAKSETGIPPEPGSELVDVNVNGALYTSYLAMHYFRRSPELTKGHRNLILMSSIGGLY
PCMLTPVYSSTKHALIGLTRSVGERLWEDGIRVNALCPGVVETPLLANEAFNAIFPREILIPIDVVTGVVSELLS
GADMVDAKGMRVAGDEMHSRALHVSGKSFLFIEKPEFHDAQSRITWAAMMGHK*
Coding >Pro_DTO377G3_2|g6214.t1
ATGGCCAAAGTCGCTCTTATTACCGGCGGTACTAGCGGAATGGGGCTTGCAGTTGCCAAGGACCTGAGCCAGACC
GGCAGCTGGCAGGTCAACATTATCGGCACCAACCAGGAGCGAGGCCAAGAAGCAGCAGCTTCCTTGTTAAATGTC
ACATTCTACCAAGCCGACGTGCGCAATTACCAACAACTAGCCGCTGTATTTGACCAGATCTTCAATGCCACTGAC
CGAATAGACTTTGTCTTCGCGAACGCCGGAAGAGCAGATTATACCGATTTCTTCGCCAAATCCGAGACCGGCATC
CCGCCCGAACCGGGTTCTGAACTTGTCGATGTCAACGTGAACGGCGCTCTATATACCAGTTACCTTGCGATGCAC
TATTTCCGTCGCTCTCCAGAGTTAACGAAAGGGCATAGGAATTTAATACTCATGTCGAGTATCGGGGGACTATAC
CCCTGCATGTTGACCCCGGTGTACTCTAGCACTAAACATGCGCTCATTGGGCTCACTCGCTCTGTCGGAGAGCGA
CTTTGGGAAGATGGAATTCGGGTTAATGCTCTGTGTCCCGGGGTGGTGGAAACGCCCCTTCTTGCCAACGAGGCG
TTTAATGCGATCTTTCCGCGGGAAATACTCATTCCTATAGACGTTGTAACTGGTGTGGTATCAGAGCTACTGTCT
GGGGCAGATATGGTAGACGCCAAAGGGATGCGTGTCGCTGGTGATGAGATGCATTCCCGGGCGCTTCATGTTTCA
GGAAAGAGCTTCCTTTTCATTGAGAAGCCCGAGTTTCACGATGCGCAGTCTCGGATAACTTGGGCTGCAATGATG
GGGCATAAATAA
Transcript >Pro_DTO377G3_2|g6214.t1
ATGGCCAAAGTCGCTCTTATTACCGGCGGTACTAGCGGAATGGGGCTTGCAGTTGCCAAGGACCTGAGCCAGACC
GGCAGCTGGCAGGTCAACATTATCGGCACCAACCAGGAGCGAGGCCAAGAAGCAGCAGCTTCCTTGTTAAATGTC
ACATTCTACCAAGCCGACGTGCGCAATTACCAACAACTAGCCGCTGTATTTGACCAGATCTTCAATGCCACTGAC
CGAATAGACTTTGTCTTCGCGAACGCCGGAAGAGCAGATTATACCGATTTCTTCGCCAAATCCGAGACCGGCATC
CCGCCCGAACCGGGTTCTGAACTTGTCGATGTCAACGTGAACGGCGCTCTATATACCAGTTACCTTGCGATGCAC
TATTTCCGTCGCTCTCCAGAGTTAACGAAAGGGCATAGGAATTTAATACTCATGTCGAGTATCGGGGGACTATAC
CCCTGCATGTTGACCCCGGTGTACTCTAGCACTAAACATGCGCTCATTGGGCTCACTCGCTCTGTCGGAGAGCGA
CTTTGGGAAGATGGAATTCGGGTTAATGCTCTGTGTCCCGGGGTGGTGGAAACGCCCCTTCTTGCCAACGAGGCG
TTTAATGCGATCTTTCCGCGGGAAATACTCATTCCTATAGACGTTGTAACTGGTGTGGTATCAGAGCTACTGTCT
GGGGCAGATATGGTAGACGCCAAAGGGATGCGTGTCGCTGGTGATGAGATGCATTCCCGGGCGCTTCATGTTTCA
GGAAAGAGCTTCCTTTTCATTGAGAAGCCCGAGTTTCACGATGCGCAGTCTCGGATAACTTGGGCTGCAATGATG
GGGCATAAATAA
Gene >Pro_DTO377G3_2|g6214.t1
ATGGCCAAAGTCGCTCTTATTACCGGCGGTAGTATGTAGCTTTCTATCCTCGGATCATTCATTCACTAAGTTTAT
TGAAAAAAGCTAGCGGAATGGGGCTTGCAGTTGCCAAGGACCTGAGCCAGACCGGCAGCTGGCAGGTCAACATTA
TCGGCACCAACCAGGAGCGAGGCCAAGAAGCAGCAGCTTCCTTGTTAAATGTCACATTCTACCAAGCCGACGTGC
GCAATTACCAACAACTAGCCGCTGTATTTGACCAGATCTTCAATGCCACTGACCGAATAGACTTTGTCTTCGCGA
ACGCCGGAAGAGCAGATTATACCGATTTCTTCGCCAAATCCGAGACCGGCATCCCGCCCGAACCGGGTTCTGAAC
TTGTCGATGTCAACGTGAACGGCGCTCTATATACCAGTTACCTTGCGATGCACTATTTCCGTCGCTCTCCAGAGT
TAACGAAAGGGCATAGGAATTTAATACTCATGTCGAGTATCGGGGGACTATACCCCTGCATGTTGACCCCGGTGT
ACTCTAGCACTAAACGTATGTTGAGAATTAACAACTCGAATAAGTTCGCCATCAGACATGGCTAATAAGTTCCTA
GATGCGCTCATTGGGCTCACTCGCTCTGTCGGAGAGCGACTTTGGGAAGATGGAATTCGGGTTAATGCTCTGTGT
CCCGGGGTGGTGGAAACGCCCCTTCTTGCCAACGAGGCGTTTAATGCGATCTTTCCGCGGGAAATACTCATTCCT
ATAGACGTTGTAACTGGTGTGGTATCAGAGCTACTGTCTGGGGCAGATATGGTAGACGCCAAAGGGATGCGTGTC
GCTGGTGATGAGATGCATTCCCGGGCGCTTCATGTTTCAGGAAAGAGCTTCCTTTTCATTGAGAAGCCCGAGTTT
CACGATGCGCAGTCTCGGATAACTTGGGCTGCAATGATGGGGCATAAATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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