Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g6213.t1
Gene name
Locationscaffold_16:239888..241158
Strand-
Gene length (bp)1270
Transcript length (bp)1047
Coding sequence length (bp)1047
Protein length (aa) 349

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PFAM Domains

(None)

GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 70 0.5

Transmembrane Domains

Domain # Start End Length
1 26 48 22
2 61 83 22
3 98 120 22
4 141 163 22
5 183 205 22
6 217 239 22
7 254 276 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g6213.t1
MSSPDSSSPTWTPGDFEHPNQELRRSMIIALVFAYTLSTLSVALRILARKVTGSRLFMDDYLIMVALFFKYACSS
GVVVLLFNGMGSHITMIPAKNLVVYFQLGFANAFIYTGCIAFIKYSILALYRRLFAVRHMTIAVNIMFGFVTLWV
VGVYVAGALLCIPVKRFWDQSVEGACLDPAKFYYGIQIPNILSDIILLIMPMRVVWTLPISNGQKALLSGVFLVG
GLTLIFDIFRLNAMIRLVELGPDITYNQVPVIVWTCIEAAVGITAACLPNLRPLFKLSHRNFWSQIRASNNVSEL
SDRTLVVSSNPGGTITSNHKQSVSYAVRQTFEMPRYEDYKDEKPRESV*
Coding >Pro_DTO377G3_2|g6213.t1
ATGTCTTCCCCAGATTCCTCCAGCCCCACGTGGACACCAGGAGACTTCGAACACCCGAACCAGGAGTTACGCCGG
TCGATGATTATTGCCCTGGTGTTTGCTTACACGTTGTCGACTCTCTCCGTTGCTCTCAGGATCCTGGCGAGGAAG
GTGACTGGGAGTAGGCTTTTCATGGACGACTACTTGATTATGGTTGCTCTGTTCTTTAAATATGCATGCTCCAGT
GGAGTCGTCGTTCTCCTGTTCAATGGAATGGGGTCACACATCACAATGATCCCAGCGAAAAACCTCGTGGTTTAC
TTCCAACTCGGCTTTGCCAATGCCTTTATCTACACCGGCTGCATCGCCTTCATTAAATACTCCATTCTGGCACTG
TACAGGCGACTCTTTGCAGTCCGACACATGACAATTGCAGTGAACATCATGTTTGGATTCGTCACTCTCTGGGTT
GTGGGTGTTTACGTTGCAGGTGCTCTTCTGTGTATCCCCGTCAAAAGGTTCTGGGACCAGTCGGTTGAAGGAGCC
TGCCTTGACCCAGCAAAATTCTACTATGGAATCCAAATCCCCAACATCCTCTCCGACATCATTCTCTTGATCATG
CCCATGAGAGTCGTGTGGACATTACCGATCTCAAACGGCCAGAAAGCGCTTCTCTCTGGAGTATTCCTCGTCGGT
GGCTTAACCTTGATTTTCGATATCTTCCGCCTCAATGCCATGATCCGACTGGTTGAGCTAGGTCCTGATATTACC
TATAACCAAGTTCCCGTCATCGTGTGGACCTGTATCGAAGCAGCAGTCGGAATCACGGCTGCTTGTCTCCCCAAC
CTCCGCCCTTTGTTCAAGTTGAGTCATCGCAACTTCTGGTCTCAAATTCGTGCCTCCAACAACGTATCCGAGCTG
TCCGACAGGACTCTTGTGGTCTCGAGCAATCCTGGAGGCACTATCACTTCCAACCATAAGCAAAGTGTCTCCTAT
GCGGTTCGGCAAACATTTGAGATGCCTCGATATGAAGACTACAAGGATGAGAAGCCGAGGGAAAGCGTCTAG
Transcript >Pro_DTO377G3_2|g6213.t1
ATGTCTTCCCCAGATTCCTCCAGCCCCACGTGGACACCAGGAGACTTCGAACACCCGAACCAGGAGTTACGCCGG
TCGATGATTATTGCCCTGGTGTTTGCTTACACGTTGTCGACTCTCTCCGTTGCTCTCAGGATCCTGGCGAGGAAG
GTGACTGGGAGTAGGCTTTTCATGGACGACTACTTGATTATGGTTGCTCTGTTCTTTAAATATGCATGCTCCAGT
GGAGTCGTCGTTCTCCTGTTCAATGGAATGGGGTCACACATCACAATGATCCCAGCGAAAAACCTCGTGGTTTAC
TTCCAACTCGGCTTTGCCAATGCCTTTATCTACACCGGCTGCATCGCCTTCATTAAATACTCCATTCTGGCACTG
TACAGGCGACTCTTTGCAGTCCGACACATGACAATTGCAGTGAACATCATGTTTGGATTCGTCACTCTCTGGGTT
GTGGGTGTTTACGTTGCAGGTGCTCTTCTGTGTATCCCCGTCAAAAGGTTCTGGGACCAGTCGGTTGAAGGAGCC
TGCCTTGACCCAGCAAAATTCTACTATGGAATCCAAATCCCCAACATCCTCTCCGACATCATTCTCTTGATCATG
CCCATGAGAGTCGTGTGGACATTACCGATCTCAAACGGCCAGAAAGCGCTTCTCTCTGGAGTATTCCTCGTCGGT
GGCTTAACCTTGATTTTCGATATCTTCCGCCTCAATGCCATGATCCGACTGGTTGAGCTAGGTCCTGATATTACC
TATAACCAAGTTCCCGTCATCGTGTGGACCTGTATCGAAGCAGCAGTCGGAATCACGGCTGCTTGTCTCCCCAAC
CTCCGCCCTTTGTTCAAGTTGAGTCATCGCAACTTCTGGTCTCAAATTCGTGCCTCCAACAACGTATCCGAGCTG
TCCGACAGGACTCTTGTGGTCTCGAGCAATCCTGGAGGCACTATCACTTCCAACCATAAGCAAAGTGTCTCCTAT
GCGGTTCGGCAAACATTTGAGATGCCTCGATATGAAGACTACAAGGATGAGAAGCCGAGGGAAAGCGTCTAG
Gene >Pro_DTO377G3_2|g6213.t1
ATGTCTTCCCCAGATTCCTCCAGCCCCACGTGGACACCAGGAGACTTCGAACACCCGAACCAGGAGTTACGCCGG
TCGATGATTATTGCCCTGGTGTTTGCTTACACGTTGTCGACTCTCTCCGTTGCTCTCAGGATCCTGGCGAGGAAG
GTGACTGGGAGTAGGCTTTTCATGGACGACTACTTGATTATGGTTGCTCTGTTCTTTAAATATGCATGCTCCAGT
GGAGTCGTCGTTCGTGAGTGAATCAAAATCCCCATTAAACCAACGTATACTAATACCATATTAGTCCTGTTCAAT
GGAATGGGGTCACACATCACAATGATCCCAGCGAAAAACCTCGTGGTTTACTTCCAAGTACGTAACTCAGCCCTA
TAACTATCAAGTACACGCATTGACTCAAGATAGCTCGGCTTTGCCAATGCCTTTATCTACACCGGCTGCATCGCC
TTCATTAAATACTCCATTCTGGCACTGTACAGGCGACTCTTTGCAGTCCGACACATGACAATTGCAGTGAACATC
ATGTTTGGATTCGTCACTCTCTGGGTTGTGGGTGTTTACGTTGCAGGTGCTCTTCTGTGTATCCCCGTCAAAAGG
TTCTGGGACCAGTCGGTTGAAGGAGCCTGCCTTGACCCAGCAAAATTCTACTATGGAATCCAAATCCCCAACATC
CTCTCCGACATCATTCTCTTGATCATGCCCATGAGAGTCGTGTGGACATTACCGATCTCAAACGGCCAGAAAGCG
CTTCTCTCTGGAGTATTCCTCGTCGGTGGCTTGTATGTTTGATATCCCATTCGCGCTACAGTGAAAGAATACTAA
CAATTCATGTCTAGAACCTTGATTTTCGATATCTTCCGCCTCAATGCCATGATCCGACTGGTTGAGCTAGGTCCT
GATATTACCTGTGAGTATCGACCGTGCCAATATTCTTTCAATCTCTCGATCCATATCTCTAACCACATGTTCAGA
TAACCAAGTTCCCGTCATCGTGTGGACCTGTATCGAAGCAGCAGTCGGAATCACGGCTGCTTGTCTCCCCAACCT
CCGCCCTTTGTTCAAGTTGAGTCATCGCAACTTCTGGTCTCAAATTCGTGCCTCCAACAACGTATCCGAGCTGTC
CGACAGGACTCTTGTGGTCTCGAGCAATCCTGGAGGCACTATCACTTCCAACCATAAGCAAAGTGTCTCCTATGC
GGTTCGGCAAACATTTGAGATGCCTCGATATGAAGACTACAAGGATGAGAAGCCGAGGGAAAGCGTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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